RNA–Protein interactions for RNA: ENST00000600646.5

FKRP-220, Transcript of fukutin related protein, humanhuman

TSL 3

Gene FKRP, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FKRP-220ENST00000600646 PLEKHG2Q9H7P9 1386 aa10.34□□□□□ -0.75
FKRP-220ENST00000600646 PCDH11XQ9BZA7 1347 aa10.33□□□□□ -0.76
FKRP-220ENST00000600646 PCDH11YQ9BZA8 1340 aa10.33□□□□□ -0.76
FKRP-220ENST00000600646 APBA3O96018 575 aa10.33□□□□□ -0.76
FKRP-220ENST00000600646 MARCH10Q8NA82 808 aaPredicted RBP10.33□□□□□ -0.76
FKRP-220ENST00000600646 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.33□□□□□ -0.76
FKRP-220ENST00000600646 RGPD2P0DJD1 1756 aa10.33□□□□□ -0.76
FKRP-220ENST00000600646 IGSF1Q8N6C5 1336 aa10.33□□□□□ -0.76
FKRP-220ENST00000600646 U2SURPO15042 1029 aaKnown RBP10.32□□□□□ -0.76
FKRP-220ENST00000600646 NEFMP07197 916 aa10.32□□□□□ -0.76
FKRP-220ENST00000600646 HMGB2P26583 209 aaKnown RBP10.32□□□□□ -0.76
FKRP-220ENST00000600646 PPP2R1AP30153 589 aa10.32□□□□□ -0.76
FKRP-220ENST00000600646 AMOTQ4VCS5 1084 aa10.32□□□□□ -0.76
FKRP-220ENST00000600646 PLEKHO1Q53GL0 409 aaPredicted RBP10.32□□□□□ -0.76
FKRP-220ENST00000600646 BCL11BQ9C0K0 894 aaPredicted RBP10.32□□□□□ -0.76
FKRP-220ENST00000600646 BCL9O00512 1426 aa10.32□□□□□ -0.76
FKRP-220ENST00000600646 HSP90AB1P08238 724 aaKnown RBP10.31□□□□□ -0.76
FKRP-220ENST00000600646 IL13P35225 146 aa10.31□□□□□ -0.76
FKRP-220ENST00000600646 SULT6B1Q6IMI4 303 aa10.31□□□□□ -0.76
FKRP-220ENST00000600646 PARD3Q8TEW0 1356 aa10.3□□□□□ -0.76
FKRP-220ENST00000600646 MEGF6O75095 1541 aa10.3□□□□□ -0.76
FKRP-220ENST00000600646 C1orf141Q5JVX7 400 aa10.3□□□□□ -0.76
FKRP-220ENST00000600646 IFNL2Q8IZJ0 200 aa10.3□□□□□ -0.76
FKRP-220ENST00000600646 SYTL4Q96C24 671 aaPredicted RBP10.3□□□□□ -0.76
FKRP-220ENST00000600646 PNNQ9H307 717 aaKnown RBP10.3□□□□□ -0.76
FKRP-220ENST00000600646 ACSBG1Q96GR2 724 aa10.29□□□□□ -0.76
FKRP-220ENST00000600646 NCAPD2Q15021 1401 aa10.29□□□□□ -0.76
FKRP-220ENST00000600646 PLSCR1O15162 318 aa10.28□□□□□ -0.76
FKRP-220ENST00000600646 EN1Q05925 392 aaPredicted RBP10.28□□□□□ -0.76
FKRP-220ENST00000600646 MYBBP1AQ9BQG0 1328 aaKnown RBP10.28□□□□□ -0.76
FKRP-220ENST00000600646 KDRP35968 1356 aa10.27□□□□□ -0.76
FKRP-220ENST00000600646 ANP32CO43423 234 aa10.27□□□□□ -0.77
FKRP-220ENST00000600646 HMOX1P09601 288 aa10.27□□□□□ -0.77
FKRP-220ENST00000600646 U2AF1L5P0DN76 240 aaPredicted RBP10.27□□□□□ -0.77
FKRP-220ENST00000600646 U2AF1Q01081 240 aaKnown RBP eCLIP10.27□□□□□ -0.77
FKRP-220ENST00000600646 NBPF14Q5TI25 921 aa10.27□□□□□ -0.77
FKRP-220ENST00000600646 DEFB132Q7Z7B7 95 aa10.27□□□□□ -0.77
FKRP-220ENST00000600646 PRIM1P49642 420 aaKnown RBP10.26□□□□□ -0.77
FKRP-220ENST00000600646 ZNF530Q6P9A1 599 aaPredicted RBP10.26□□□□□ -0.77
FKRP-220ENST00000600646 DCAF5Q96JK2 942 aa10.26□□□□□ -0.77
FKRP-220ENST00000600646 PKD1L3Q7Z443 1732 aa10.26□□□□□ -0.77
FKRP-220ENST00000600646 TNS1Q9HBL0 1735 aaKnown RBP10.26□□□□□ -0.77
FKRP-220ENST00000600646 SBF2Q86WG5 1849 aa10.26□□□□□ -0.77
FKRP-220ENST00000600646 NHSQ6T4R5 1651 aa10.25□□□□□ -0.77
FKRP-220ENST00000600646 CYP27B1O15528 508 aa10.25□□□□□ -0.77
FKRP-220ENST00000600646 FCHSD2O94868 740 aa10.25□□□□□ -0.77
FKRP-220ENST00000600646 PHKG2P15735 406 aa10.25□□□□□ -0.77
FKRP-220ENST00000600646 NKX1-1Q15270 411 aaPredicted RBP10.25□□□□□ -0.77
FKRP-220ENST00000600646 EZH2Q15910 746 aaKnown RBP10.25□□□□□ -0.77
FKRP-220ENST00000600646 AEBP1Q8IUX7 1158 aa10.25□□□□□ -0.77
FKRP-220ENST00000600646 GAS2L2Q8NHY3 880 aa10.25□□□□□ -0.77
FKRP-220ENST00000600646 PRKRIP1Q9H875 184 aaPredicted RBP10.25□□□□□ -0.77
FKRP-220ENST00000600646 TMOD3Q9NYL9 352 aa10.25□□□□□ -0.77
FKRP-220ENST00000600646 ERVV-2B6SEH9 535 aa10.24□□□□□ -0.77
FKRP-220ENST00000600646 KCNQ2O43526 872 aa10.24□□□□□ -0.77
FKRP-220ENST00000600646 WDR43Q15061 677 aaKnown RBP eCLIP10.24□□□□□ -0.77
FKRP-220ENST00000600646 AKAP4Q5JQC9 854 aa10.24□□□□□ -0.77
FKRP-220ENST00000600646 MPRIPQ6WCQ1 1025 aa10.24□□□□□ -0.77
FKRP-220ENST00000600646 SMARCC1Q92922 1105 aaPredicted RBP10.24□□□□□ -0.77
FKRP-220ENST00000600646 CAMKK2Q96RR4 588 aa10.24□□□□□ -0.77
FKRP-220ENST00000600646 COL3A1P02461 1466 aaPredicted RBP10.23□□□□□ -0.77
FKRP-220ENST00000600646 KAT6BQ8WYB5 2073 aa10.23□□□□□ -0.77
FKRP-220ENST00000600646 CABP4P57796 275 aa10.23□□□□□ -0.77
FKRP-220ENST00000600646 DOT1LQ8TEK3 1739 aa10.23□□□□□ -0.77
FKRP-220ENST00000600646 SHANK3Q9BYB0 1731 aa10.23□□□□□ -0.77
FKRP-220ENST00000600646 RGPD3A6NKT7 1758 aaPredicted RBP10.23□□□□□ -0.77
FKRP-220ENST00000600646 RGPD4Q7Z3J3 1758 aa10.23□□□□□ -0.77
FKRP-220ENST00000600646 PRKAR2BP31323 418 aa10.22□□□□□ -0.77
FKRP-220ENST00000600646 SLC27A3Q5K4L6 730 aa10.22□□□□□ -0.77
FKRP-220ENST00000600646 RTF1Q92541 710 aaKnown RBP10.22□□□□□ -0.77
FKRP-220ENST00000600646 MAPK8IP3Q9UPT6 1336 aa10.22□□□□□ -0.77
FKRP-220ENST00000600646 GNAT3A8MTJ3 354 aa10.21□□□□□ -0.77
FKRP-220ENST00000600646 TXNRD1Q16881 649 aa10.21□□□□□ -0.77
FKRP-220ENST00000600646 BTAF1O14981 1849 aa10.21□□□□□ -0.78
FKRP-220ENST00000600646 MTHFSDQ2M296 383 aaKnown RBP10.2□□□□□ -0.78
FKRP-220ENST00000600646 EP400Q96L91 3159 aa10.2□□□□□ -0.78
FKRP-220ENST00000600646 RSPH6AQ9H0K4 717 aa10.2□□□□□ -0.78
FKRP-220ENST00000600646 STK32BQ9NY57 414 aa10.2□□□□□ -0.78
FKRP-220ENST00000600646 TEFQ10587 303 aa10.19□□□□□ -0.78
FKRP-220ENST00000600646 CCNL1Q9UK58 526 aaPredicted RBP10.19□□□□□ -0.78
FKRP-220ENST00000600646 MAP3K5Q99683 1374 aa10.18□□□□□ -0.78
FKRP-220ENST00000600646 HTATSF1O43719 755 aaKnown RBP10.18□□□□□ -0.78
FKRP-220ENST00000600646 PTF1AQ7RTS3 328 aa10.18□□□□□ -0.78
FKRP-220ENST00000600646 PIGBQ92521 554 aa10.18□□□□□ -0.78
FKRP-220ENST00000600646 RREB1Q92766 1687 aa10.18□□□□□ -0.78
FKRP-220ENST00000600646 PALLDQ8WX93 1383 aa10.17□□□□□ -0.78
FKRP-220ENST00000600646 ITGB4P16144 1822 aa10.17□□□□□ -0.78
FKRP-220ENST00000600646 RNMTO43148 476 aaKnown RBP10.17□□□□□ -0.78
FKRP-220ENST00000600646 TTC5Q8N0Z6 440 aa10.17□□□□□ -0.78
FKRP-220ENST00000600646 NFATC2IPQ8NCF5 419 aa10.17□□□□□ -0.78
FKRP-220ENST00000600646 LMOD3Q0VAK6 560 aa10.16□□□□□ -0.78
FKRP-220ENST00000600646 R3HDM1Q15032 1099 aaKnown RBP10.16□□□□□ -0.78
FKRP-220ENST00000600646 SLC15A2Q16348 729 aa10.16□□□□□ -0.78
FKRP-220ENST00000600646 PHACTR3Q96KR7 559 aa10.16□□□□□ -0.78
FKRP-220ENST00000600646 RBM42Q9BTD8 480 aaKnown RBP10.16□□□□□ -0.78
FKRP-220ENST00000600646 SLC52A2Q9HAB3 445 aa10.16□□□□□ -0.78
FKRP-220ENST00000600646 NUP188Q5SRE5 1749 aa10.16□□□□□ -0.78
FKRP-220ENST00000600646 ATP6V1AP38606 617 aa10.15□□□□□ -0.78
FKRP-220ENST00000600646 PROM2Q8N271 834 aa10.15□□□□□ -0.78
FKRP-220ENST00000600646 RUNDC1Q96C34 613 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms