RNA–Protein interactions for RNA: ENST00000600523.5

SRRM1-223, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-223ENST00000600523 PCDH11YQ9BZA8 1340 aa17.44■□□□□ 0.38
SRRM1-223ENST00000600523 PLEKHG2Q9H7P9 1386 aa17.43■□□□□ 0.38
SRRM1-223ENST00000600523 MEGF6O75095 1541 aa17.43■□□□□ 0.38
SRRM1-223ENST00000600523 BAG6P46379 1132 aa17.43■□□□□ 0.38
SRRM1-223ENST00000600523 SULT6B1Q6IMI4 303 aa17.43■□□□□ 0.38
SRRM1-223ENST00000600523 MARCH10Q8NA82 808 aaPredicted RBP17.43■□□□□ 0.38
SRRM1-223ENST00000600523 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.43■□□□□ 0.386e-7■■□□□ 13.1
SRRM1-223ENST00000600523 NCAPD2Q15021 1401 aa17.42■□□□□ 0.38
SRRM1-223ENST00000600523 PLEKHO1Q53GL0 409 aaPredicted RBP17.42■□□□□ 0.38
SRRM1-223ENST00000600523 TRIM37O94972 964 aa17.41■□□□□ 0.38
SRRM1-223ENST00000600523 AMOTQ4VCS5 1084 aa17.41■□□□□ 0.38
SRRM1-223ENST00000600523 MYBBP1AQ9BQG0 1328 aaKnown RBP17.41■□□□□ 0.38
SRRM1-223ENST00000600523 BCL9O00512 1426 aa17.4■□□□□ 0.38
SRRM1-223ENST00000600523 ANP32CO43423 234 aa17.38■□□□□ 0.37
SRRM1-223ENST00000600523 NEFMP07197 916 aa17.38■□□□□ 0.37
SRRM1-223ENST00000600523 BCL11BQ9C0K0 894 aaPredicted RBP17.38■□□□□ 0.37
SRRM1-223ENST00000600523 KDRP35968 1356 aa17.38■□□□□ 0.37
SRRM1-223ENST00000600523 RGPD1P0DJD0 1748 aa17.38■□□□□ 0.37
SRRM1-223ENST00000600523 APBA3O96018 575 aa17.37■□□□□ 0.37
SRRM1-223ENST00000600523 HSP90AB1P08238 724 aaKnown RBP17.37■□□□□ 0.37
SRRM1-223ENST00000600523 HMOX1P09601 288 aa17.37■□□□□ 0.37
SRRM1-223ENST00000600523 U2AF1L5P0DN76 240 aaPredicted RBP17.37■□□□□ 0.37
SRRM1-223ENST00000600523 U2AF1Q01081 240 aaKnown RBP eCLIP17.37■□□□□ 0.371e-12■■□□□ 14.4
SRRM1-223ENST00000600523 C1orf141Q5JVX7 400 aa17.37■□□□□ 0.37
SRRM1-223ENST00000600523 AEBP1Q8IUX7 1158 aa17.37■□□□□ 0.37
SRRM1-223ENST00000600523 IFNL2Q8IZJ0 200 aa17.37■□□□□ 0.37
SRRM1-223ENST00000600523 PRKRIP1Q9H875 184 aaPredicted RBP17.37■□□□□ 0.37
SRRM1-223ENST00000600523 SYTL4Q96C24 671 aaPredicted RBP17.36■□□□□ 0.37
SRRM1-223ENST00000600523 PNNQ9H307 717 aaKnown RBP17.36■□□□□ 0.37
SRRM1-223ENST00000600523 COL3A1P02461 1466 aaPredicted RBP17.36■□□□□ 0.37
SRRM1-223ENST00000600523 ACSBG1Q96GR2 724 aa17.35■□□□□ 0.37
SRRM1-223ENST00000600523 ZNF530Q6P9A1 599 aaPredicted RBP17.34■□□□□ 0.37
SRRM1-223ENST00000600523 CYP27B1O15528 508 aa17.33■□□□□ 0.36
SRRM1-223ENST00000600523 PKD1L3Q7Z443 1732 aa17.33■□□□□ 0.36
SRRM1-223ENST00000600523 FCHSD2O94868 740 aa17.32■□□□□ 0.36
SRRM1-223ENST00000600523 PHKG2P15735 406 aa17.31■□□□□ 0.36
SRRM1-223ENST00000600523 WDR43Q15061 677 aaKnown RBP eCLIP17.31■□□□□ 0.36
SRRM1-223ENST00000600523 DEFB132Q7Z7B7 95 aa17.31■□□□□ 0.36
SRRM1-223ENST00000600523 PRIM1P49642 420 aaKnown RBP17.3■□□□□ 0.36
SRRM1-223ENST00000600523 EN1Q05925 392 aaPredicted RBP17.3■□□□□ 0.36
SRRM1-223ENST00000600523 NKX1-1Q15270 411 aaPredicted RBP17.3■□□□□ 0.36
SRRM1-223ENST00000600523 GAS2L2Q8NHY3 880 aa17.3■□□□□ 0.36
SRRM1-223ENST00000600523 DCAF5Q96JK2 942 aa17.3■□□□□ 0.36
SRRM1-223ENST00000600523 PLSCR1O15162 318 aa17.29■□□□□ 0.36
SRRM1-223ENST00000600523 KCNQ2O43526 872 aa17.29■□□□□ 0.36
SRRM1-223ENST00000600523 HMGB2P26583 209 aaKnown RBP17.29■□□□□ 0.36
SRRM1-223ENST00000600523 PRKAR2BP31323 418 aa17.29■□□□□ 0.36
SRRM1-223ENST00000600523 EP400Q96L91 3159 aa17.29■□□□□ 0.36
SRRM1-223ENST00000600523 SHANK3Q9BYB0 1731 aa17.28■□□□□ 0.36
SRRM1-223ENST00000600523 AKAP4Q5JQC9 854 aa17.28■□□□□ 0.36
SRRM1-223ENST00000600523 TMOD3Q9NYL9 352 aa17.28■□□□□ 0.36
SRRM1-223ENST00000600523 NHSQ6T4R5 1651 aa17.28■□□□□ 0.36
SRRM1-223ENST00000600523 SBF2Q86WG5 1849 aa17.28■□□□□ 0.36
SRRM1-223ENST00000600523 TNS1Q9HBL0 1735 aaKnown RBP17.27■□□□□ 0.36
SRRM1-223ENST00000600523 MAPK8IP3Q9UPT6 1336 aa17.27■□□□□ 0.36
SRRM1-223ENST00000600523 KAT6BQ8WYB5 2073 aa17.27■□□□□ 0.36
SRRM1-223ENST00000600523 MPRIPQ6WCQ1 1025 aa17.27■□□□□ 0.36
SRRM1-223ENST00000600523 RSPH6AQ9H0K4 717 aa17.27■□□□□ 0.36
SRRM1-223ENST00000600523 ERVV-2B6SEH9 535 aa17.26■□□□□ 0.35
SRRM1-223ENST00000600523 CABP4P57796 275 aa17.25■□□□□ 0.35
SRRM1-223ENST00000600523 EZH2Q15910 746 aaKnown RBP17.25■□□□□ 0.35
SRRM1-223ENST00000600523 MTHFSDQ2M296 383 aaKnown RBP17.25■□□□□ 0.35
SRRM1-223ENST00000600523 SMARCC1Q92922 1105 aaPredicted RBP17.25■□□□□ 0.35
SRRM1-223ENST00000600523 CAMKK2Q96RR4 588 aa17.25■□□□□ 0.35
SRRM1-223ENST00000600523 DOT1LQ8TEK3 1739 aa17.24■□□□□ 0.35
SRRM1-223ENST00000600523 NBPF14Q5TI25 921 aa17.24■□□□□ 0.35
SRRM1-223ENST00000600523 RTF1Q92541 710 aaKnown RBP17.24■□□□□ 0.35
SRRM1-223ENST00000600523 GNAT3A8MTJ3 354 aa17.23■□□□□ 0.35
SRRM1-223ENST00000600523 PTF1AQ7RTS3 328 aa17.23■□□□□ 0.35
SRRM1-223ENST00000600523 MAP3K5Q99683 1374 aa17.21■□□□□ 0.35
SRRM1-223ENST00000600523 TXNRD1Q16881 649 aa17.21■□□□□ 0.35
SRRM1-223ENST00000600523 SLC27A3Q5K4L6 730 aa17.21■□□□□ 0.35
SRRM1-223ENST00000600523 RGPD3A6NKT7 1758 aaPredicted RBP17.2■□□□□ 0.34
SRRM1-223ENST00000600523 RGPD4Q7Z3J3 1758 aa17.2■□□□□ 0.34
SRRM1-223ENST00000600523 BTAF1O14981 1849 aa17.2■□□□□ 0.34
SRRM1-223ENST00000600523 PHACTR3Q96KR7 559 aa17.2■□□□□ 0.34
SRRM1-223ENST00000600523 MRS2Q9HD23 443 aa17.2■□□□□ 0.34
SRRM1-223ENST00000600523 TEFQ10587 303 aa17.19■□□□□ 0.34
SRRM1-223ENST00000600523 PIGBQ92521 554 aa17.19■□□□□ 0.34
SRRM1-223ENST00000600523 RNMTO43148 476 aaKnown RBP17.18■□□□□ 0.34
SRRM1-223ENST00000600523 KDM6AO15550 1401 aaPredicted RBP17.18■□□□□ 0.34
SRRM1-223ENST00000600523 PALLDQ8WX93 1383 aa17.17■□□□□ 0.34
SRRM1-223ENST00000600523 HTATSF1O43719 755 aaKnown RBP17.17■□□□□ 0.34
SRRM1-223ENST00000600523 NFATC2IPQ8NCF5 419 aa17.17■□□□□ 0.34
SRRM1-223ENST00000600523 CCNL1Q9UK58 526 aaPredicted RBP17.17■□□□□ 0.34
SRRM1-223ENST00000600523 LMOD3Q0VAK6 560 aa17.16■□□□□ 0.34
SRRM1-223ENST00000600523 NFE2L2Q16236 605 aa17.16■□□□□ 0.34
SRRM1-223ENST00000600523 RUNDC1Q96C34 613 aa17.16■□□□□ 0.34
SRRM1-223ENST00000600523 SLC52A2Q9HAB3 445 aa17.16■□□□□ 0.34
SRRM1-223ENST00000600523 STK32BQ9NY57 414 aa17.16■□□□□ 0.34
SRRM1-223ENST00000600523 ADAMTS8Q9UP79 889 aa17.16■□□□□ 0.34
SRRM1-223ENST00000600523 TOGARAM1Q9Y4F4 1720 aa17.16■□□□□ 0.34
SRRM1-223ENST00000600523 PLEKHF1Q96S99 279 aa17.15■□□□□ 0.34
SRRM1-223ENST00000600523 LGR6Q9HBX8 967 aa17.15■□□□□ 0.34
SRRM1-223ENST00000600523 ITGB4P16144 1822 aa17.14■□□□□ 0.34
SRRM1-223ENST00000600523 CCDC146Q8IYE0 955 aa17.13■□□□□ 0.33
SRRM1-223ENST00000600523 TTC5Q8N0Z6 440 aa17.13■□□□□ 0.33
SRRM1-223ENST00000600523 PROM2Q8N271 834 aa17.13■□□□□ 0.33
SRRM1-223ENST00000600523 ATG3Q9NT62 314 aa17.13■□□□□ 0.33
SRRM1-223ENST00000600523 ASAP1Q9ULH1 1129 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms