RNA–Protein interactions for RNA: ENST00000600196.1

TGFB1-204, Transcript of transforming growth factor beta 1, humanhuman

TSL 5

Gene TGFB1, Length 399 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-204ENST00000600196 GAS2L2Q8NHY3 880 aa16.28■□□□□ 0.2
TGFB1-204ENST00000600196 OVOS2A0A0G2JMS6 1433 aa16.28■□□□□ 0.2
TGFB1-204ENST00000600196 HTATSF1O43719 755 aaKnown RBP16.27■□□□□ 0.2
TGFB1-204ENST00000600196 ZCRB1Q8TBF4 217 aaKnown RBP16.27■□□□□ 0.2
TGFB1-204ENST00000600196 HSP90AB1P08238 724 aaKnown RBP16.26■□□□□ 0.19
TGFB1-204ENST00000600196 HMOX1P09601 288 aa16.26■□□□□ 0.19
TGFB1-204ENST00000600196 PRKAR2BP31323 418 aa16.26■□□□□ 0.19
TGFB1-204ENST00000600196 MAPK8IP3Q9UPT6 1336 aa16.25■□□□□ 0.19
TGFB1-204ENST00000600196 DDB1Q16531 1140 aa16.25■□□□□ 0.19
TGFB1-204ENST00000600196 AEBP1Q8IUX7 1158 aa16.25■□□□□ 0.19
TGFB1-204ENST00000600196 USP35Q9P2H5 1018 aa16.25■□□□□ 0.19
TGFB1-204ENST00000600196 PCDH11XQ9BZA7 1347 aa16.24■□□□□ 0.19
TGFB1-204ENST00000600196 PCDH11YQ9BZA8 1340 aa16.24■□□□□ 0.19
TGFB1-204ENST00000600196 NKX1-1Q15270 411 aaPredicted RBP16.24■□□□□ 0.19
TGFB1-204ENST00000600196 BCL9O00512 1426 aa16.24■□□□□ 0.19
TGFB1-204ENST00000600196 GLI3P10071 1580 aa16.24■□□□□ 0.19
TGFB1-204ENST00000600196 LMOD3Q0VAK6 560 aa16.23■□□□□ 0.19
TGFB1-204ENST00000600196 FAM98CQ17RN3 349 aaKnown RBP16.23■□□□□ 0.19
TGFB1-204ENST00000600196 AKAP4Q5JQC9 854 aa16.23■□□□□ 0.19
TGFB1-204ENST00000600196 IFNL2Q8IZJ0 200 aa16.23■□□□□ 0.19
TGFB1-204ENST00000600196 USHBP1Q8N6Y0 703 aa16.23■□□□□ 0.19
TGFB1-204ENST00000600196 PARP4Q9UKK3 1724 aaKnown RBP16.22■□□□□ 0.19
TGFB1-204ENST00000600196 CCDC27Q2M243 656 aa16.22■□□□□ 0.19
TGFB1-204ENST00000600196 POTEAQ6S8J7 498 aa16.22■□□□□ 0.19
TGFB1-204ENST00000600196 FAM9BQ8IZU0 186 aa16.22■□□□□ 0.19
TGFB1-204ENST00000600196 TNS2Q63HR2 1409 aa16.21■□□□□ 0.19
TGFB1-204ENST00000600196 RGPD2P0DJD1 1756 aa16.21■□□□□ 0.19
TGFB1-204ENST00000600196 MEGF6O75095 1541 aa16.21■□□□□ 0.19
TGFB1-204ENST00000600196 NFE2L2Q16236 605 aa16.21■□□□□ 0.19
TGFB1-204ENST00000600196 C1orf141Q5JVX7 400 aa16.21■□□□□ 0.19
TGFB1-204ENST00000600196 SEPT12Q8IYM1 358 aa16.21■□□□□ 0.19
TGFB1-204ENST00000600196 THSD7AQ9UPZ6 1657 aa16.21■□□□□ 0.18
TGFB1-204ENST00000600196 PDE3BQ13370 1112 aa16.2■□□□□ 0.18
TGFB1-204ENST00000600196 MTHFSDQ2M296 383 aaKnown RBP16.2■□□□□ 0.18
TGFB1-204ENST00000600196 PHACTR3Q96KR7 559 aa16.2■□□□□ 0.18
TGFB1-204ENST00000600196 GNAT3A8MTJ3 354 aa16.19■□□□□ 0.18
TGFB1-204ENST00000600196 TMPOP42166 694 aaKnown RBP16.19■□□□□ 0.18
TGFB1-204ENST00000600196 DCAF5Q96JK2 942 aa16.19■□□□□ 0.18
TGFB1-204ENST00000600196 WNK3Q9BYP7 1800 aa16.18■□□□□ 0.18
TGFB1-204ENST00000600196 PHKG2P15735 406 aa16.18■□□□□ 0.18
TGFB1-204ENST00000600196 ZNF530Q6P9A1 599 aaPredicted RBP16.18■□□□□ 0.18
TGFB1-204ENST00000600196 PKD1L3Q7Z443 1732 aa16.18■□□□□ 0.18
TGFB1-204ENST00000600196 ERVV-2B6SEH9 535 aa16.17■□□□□ 0.18
TGFB1-204ENST00000600196 CYP27B1O15528 508 aa16.17■□□□□ 0.18
TGFB1-204ENST00000600196 CALD1Q05682 793 aaKnown RBP16.17■□□□□ 0.18
TGFB1-204ENST00000600196 APAF1O14727 1248 aa16.16■□□□□ 0.18
TGFB1-204ENST00000600196 KRT27Q7Z3Y8 459 aa16.16■□□□□ 0.18
TGFB1-204ENST00000600196 RTF1Q92541 710 aaKnown RBP16.16■□□□□ 0.18
TGFB1-204ENST00000600196 BABAM1Q9NWV8 329 aa16.16■□□□□ 0.18
TGFB1-204ENST00000600196 MAP3K5Q99683 1374 aa16.15■□□□□ 0.18
TGFB1-204ENST00000600196 RIPK4P57078 832 aa16.15■□□□□ 0.18
TGFB1-204ENST00000600196 FAM196AQ6ZSG2 479 aa16.15■□□□□ 0.18
TGFB1-204ENST00000600196 A0A0G2JS52 829 aa16.14■□□□□ 0.17
TGFB1-204ENST00000600196 HMGB2P26583 209 aaKnown RBP16.14■□□□□ 0.17
TGFB1-204ENST00000600196 MYT1Q01538 1121 aa16.14■□□□□ 0.17
TGFB1-204ENST00000600196 WDR63Q8IWG1 891 aa16.13■□□□□ 0.17
TGFB1-204ENST00000600196 CCDC146Q8IYE0 955 aa16.13■□□□□ 0.17
TGFB1-204ENST00000600196 MARCH10Q8NA82 808 aaPredicted RBP16.13■□□□□ 0.17
TGFB1-204ENST00000600196 DDX54Q8TDD1 881 aaKnown RBP16.13■□□□□ 0.17
TGFB1-204ENST00000600196 CEMIPQ8WUJ3 1361 aa16.13■□□□□ 0.17
TGFB1-204ENST00000600196 LRRC37A3O60309 1634 aa16.12■□□□□ 0.17
TGFB1-204ENST00000600196 IL16Q14005 1332 aa16.12■□□□□ 0.17
TGFB1-204ENST00000600196 RNMTO43148 476 aaKnown RBP16.11■□□□□ 0.17
TGFB1-204ENST00000600196 RGS12O14924 1447 aa16.11■□□□□ 0.17
TGFB1-204ENST00000600196 IL17REQ8NFR9 667 aa16.1■□□□□ 0.17
TGFB1-204ENST00000600196 TRIM35Q9UPQ4 493 aa16.1■□□□□ 0.17
TGFB1-204ENST00000600196 ADAMTS7Q9UKP4 1686 aa16.09■□□□□ 0.17
TGFB1-204ENST00000600196 CCDC125Q86Z20 511 aa16.09■□□□□ 0.17
TGFB1-204ENST00000600196 WWC1Q8IX03 1113 aa16.09■□□□□ 0.17
TGFB1-204ENST00000600196 SLC52A2Q9HAB3 445 aa16.08■□□□□ 0.16
TGFB1-204ENST00000600196 SHANK3Q9BYB0 1731 aa16.08■□□□□ 0.16
TGFB1-204ENST00000600196 TEFQ10587 303 aa16.07■□□□□ 0.16
TGFB1-204ENST00000600196 TAF7Q15545 349 aaPredicted RBP16.07■□□□□ 0.16
TGFB1-204ENST00000600196 BCL11BQ9C0K0 894 aaPredicted RBP16.07■□□□□ 0.16
TGFB1-204ENST00000600196 ZNF521Q96K83 1311 aa16.07■□□□□ 0.16
TGFB1-204ENST00000600196 CABP4P57796 275 aa16.06■□□□□ 0.16
TGFB1-204ENST00000600196 MPRIPQ6WCQ1 1025 aa16.06■□□□□ 0.16
TGFB1-204ENST00000600196 MRC1P22897 1456 aa16.05■□□□□ 0.16
TGFB1-204ENST00000600196 KDM6AO15550 1401 aaPredicted RBP16.05■□□□□ 0.16
TGFB1-204ENST00000600196 ZBED9Q6R2W3 1325 aa16.05■□□□□ 0.16
TGFB1-204ENST00000600196 GNAI1P63096 354 aa16.05■□□□□ 0.16
TGFB1-204ENST00000600196 NEUROD2Q15784 382 aa16.05■□□□□ 0.16
TGFB1-204ENST00000600196 CFAP44Q96MT7 982 aa16.05■□□□□ 0.16
TGFB1-204ENST00000600196 CHMP4AQ9BY43 222 aa16.05■□□□□ 0.16
TGFB1-204ENST00000600196 LGR6Q9HBX8 967 aa16.05■□□□□ 0.16
TGFB1-204ENST00000600196 IFT57Q9NWB7 429 aa16.05■□□□□ 0.16
TGFB1-204ENST00000600196 ZNF853P0CG23 659 aa16.04■□□□□ 0.16
TGFB1-204ENST00000600196 SMARCC1Q92922 1105 aaPredicted RBP16.04■□□□□ 0.16
TGFB1-204ENST00000600196 TMOD3Q9NYL9 352 aa16.04■□□□□ 0.16
TGFB1-204ENST00000600196 SCN11AQ9UI33 1791 aa16.03■□□□□ 0.16
TGFB1-204ENST00000600196 SOS1Q07889 1333 aaPredicted RBP16.03■□□□□ 0.16
TGFB1-204ENST00000600196 CHL1O00533 1208 aa16.03■□□□□ 0.16
TGFB1-204ENST00000600196 HNRNPUQ00839 825 aaKnown RBP eCLIP16.03■□□□□ 0.16
TGFB1-204ENST00000600196 GOLGA2Q08379 1002 aa16.03■□□□□ 0.16
TGFB1-204ENST00000600196 RRP7AQ9Y3A4 280 aaKnown RBP16.03■□□□□ 0.16
TGFB1-204ENST00000600196 PRIM1P49642 420 aaKnown RBP16.02■□□□□ 0.16
TGFB1-204ENST00000600196 MCM10Q7L590 875 aa16.02■□□□□ 0.16
TGFB1-204ENST00000600196 NFATC2IPQ8NCF5 419 aa16.02■□□□□ 0.16
TGFB1-204ENST00000600196 BRWD3Q6RI45 1802 aa16.02■□□□□ 0.16
TGFB1-204ENST00000600196 DLG5Q8TDM6 1919 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms