RNA–Protein interactions for RNA: ENST00000600032.5

FARP1-228, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 810 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-228ENST00000600032 KRTAP3-3Q9BYR6 98 aa13.15□□□□□ -0.3
FARP1-228ENST00000600032 KRTAP3-2Q9BYR7 98 aa13.15□□□□□ -0.3
FARP1-228ENST00000600032 ROCK2O75116 1388 aaKnown RBP13.15□□□□□ -0.3
FARP1-228ENST00000600032 BRWD3Q6RI45 1802 aa13.15□□□□□ -0.3
FARP1-228ENST00000600032 TRPM1Q7Z4N2 1603 aa13.14□□□□□ -0.31
FARP1-228ENST00000600032 PHRF1Q9P1Y6 1649 aaKnown RBP13.14□□□□□ -0.31
FARP1-228ENST00000600032 KIF3CO14782 793 aa13.14□□□□□ -0.31
FARP1-228ENST00000600032 NEUROD1Q13562 356 aa13.14□□□□□ -0.31
FARP1-228ENST00000600032 KRT27Q7Z3Y8 459 aa13.14□□□□□ -0.31
FARP1-228ENST00000600032 EVC2Q86UK5 1308 aa13.13□□□□□ -0.31
FARP1-228ENST00000600032 KIAA0232Q92628 1395 aa13.13□□□□□ -0.31
FARP1-228ENST00000600032 ABTB2Q8N961 1025 aa13.13□□□□□ -0.31
FARP1-228ENST00000600032 SIN3AQ96ST3 1273 aa13.13□□□□□ -0.31
FARP1-228ENST00000600032 FAM98CQ17RN3 349 aaKnown RBP13.12□□□□□ -0.31
FARP1-228ENST00000600032 TMC2Q8TDI7 906 aa13.12□□□□□ -0.31
FARP1-228ENST00000600032 SPATA31A5Q5VU36 1347 aa13.12□□□□□ -0.31
FARP1-228ENST00000600032 SPATA31A7Q8IWB4 1347 aa13.12□□□□□ -0.31
FARP1-228ENST00000600032 C2orf72A6NCS6 295 aa13.11□□□□□ -0.31
FARP1-228ENST00000600032 VARS2Q5ST30 1063 aaKnown RBP13.11□□□□□ -0.31
FARP1-228ENST00000600032 NUTM2GQ5VZR2 741 aa13.11□□□□□ -0.31
FARP1-228ENST00000600032 NLRP13Q86W25 1043 aa13.11□□□□□ -0.31
FARP1-228ENST00000600032 SRCAPQ6ZRS2 3230 aa13.11□□□□□ -0.31
FARP1-228ENST00000600032 NRKQ7Z2Y5 1582 aa13.1□□□□□ -0.31
FARP1-228ENST00000600032 EVA1CP58658 441 aa13.09□□□□□ -0.31
FARP1-228ENST00000600032 ZC3H6P61129 1189 aaKnown RBP13.09□□□□□ -0.31
FARP1-228ENST00000600032 USP19O94966 1318 aa13.09□□□□□ -0.31
FARP1-228ENST00000600032 CPDO75976 1380 aa13.08□□□□□ -0.31
FARP1-228ENST00000600032 USP6P35125 1406 aa13.08□□□□□ -0.32
FARP1-228ENST00000600032 CHRNA2Q15822 529 aa13.08□□□□□ -0.32
FARP1-228ENST00000600032 ARSIQ5FYB1 569 aa13.08□□□□□ -0.32
FARP1-228ENST00000600032 STRN4Q9NRL3 753 aa13.08□□□□□ -0.32
FARP1-228ENST00000600032 CABP1Q9NZU7 370 aa13.08□□□□□ -0.32
FARP1-228ENST00000600032 TONSLQ96HA7 1378 aa13.07□□□□□ -0.32
FARP1-228ENST00000600032 BAG6P46379 1132 aa13.07□□□□□ -0.32
FARP1-228ENST00000600032 ZNF687Q8N1G0 1237 aa13.07□□□□□ -0.32
FARP1-228ENST00000600032 THSD7AQ9UPZ6 1657 aa13.07□□□□□ -0.32
FARP1-228ENST00000600032 SPATA31A1Q5TZJ5 1347 aa13.07□□□□□ -0.32
FARP1-228ENST00000600032 SSH2Q76I76 1423 aa13.06□□□□□ -0.32
FARP1-228ENST00000600032 GCP02774 474 aa13.06□□□□□ -0.32
FARP1-228ENST00000600032 RYDENQ9NUL5 291 aaKnown RBP13.06□□□□□ -0.32
FARP1-228ENST00000600032 RGPD1P0DJD0 1748 aa13.05□□□□□ -0.32
FARP1-228ENST00000600032 PPP1R37O75864 691 aa13.05□□□□□ -0.32
FARP1-228ENST00000600032 SLC34A2O95436 690 aa13.05□□□□□ -0.32
FARP1-228ENST00000600032 CARD11Q9BXL7 1154 aa13.05□□□□□ -0.32
FARP1-228ENST00000600032 SBNO2Q9Y2G9 1366 aa13.05□□□□□ -0.32
FARP1-228ENST00000600032 BARGINQ6ZT62 677 aa13.04□□□□□ -0.32
FARP1-228ENST00000600032 THRAP3Q9Y2W1 955 aaKnown RBP13.04□□□□□ -0.32
FARP1-228ENST00000600032 LMO7Q8WWI1 1683 aa13.04□□□□□ -0.32
FARP1-228ENST00000600032 DEFB132Q7Z7B7 95 aa13.03□□□□□ -0.32
FARP1-228ENST00000600032 TCP11L2Q8N4U5 519 aa13.03□□□□□ -0.32
FARP1-228ENST00000600032 USP35Q9P2H5 1018 aa13.03□□□□□ -0.32
FARP1-228ENST00000600032 TTC21AQ8NDW8 1320 aa13.03□□□□□ -0.32
FARP1-228ENST00000600032 SLIT3O75094 1523 aa13.03□□□□□ -0.32
FARP1-228ENST00000600032 CAMTA1Q9Y6Y1 1673 aa13.02□□□□□ -0.32
FARP1-228ENST00000600032 AKAP12Q02952 1782 aa13.02□□□□□ -0.32
FARP1-228ENST00000600032 TRIM26Q12899 539 aaPredicted RBP13.02□□□□□ -0.33
FARP1-228ENST00000600032 PDE3BQ13370 1112 aa13.02□□□□□ -0.33
FARP1-228ENST00000600032 FAM196AQ6ZSG2 479 aa13.02□□□□□ -0.33
FARP1-228ENST00000600032 KCNH5Q8NCM2 988 aa13.02□□□□□ -0.33
FARP1-228ENST00000600032 PIK3C2AO00443 1686 aa13.02□□□□□ -0.33
FARP1-228ENST00000600032 ZBTB7CA1YPR0 619 aa13.01□□□□□ -0.33
FARP1-228ENST00000600032 ZNF316A6NFI3 1004 aaPredicted RBP13.01□□□□□ -0.33
FARP1-228ENST00000600032 C11orf95C9JLR9 678 aaPredicted RBP13.01□□□□□ -0.33
FARP1-228ENST00000600032 SLC24A1O60721 1099 aa13.01□□□□□ -0.33
FARP1-228ENST00000600032 LARP1Q6PKG0 1096 aaKnown RBP13.01□□□□□ -0.33
FARP1-228ENST00000600032 TTC21BQ7Z4L5 1316 aa13.01□□□□□ -0.33
FARP1-228ENST00000600032 AATKQ6ZMQ8 1374 aa13.01□□□□□ -0.33
FARP1-228ENST00000600032 KTN1Q86UP2 1357 aaKnown RBP13.01□□□□□ -0.33
FARP1-228ENST00000600032 COL5A2P05997 1499 aaPredicted RBP13.01□□□□□ -0.33
FARP1-228ENST00000600032 DISP2A7MBM2 1401 aa12.99□□□□□ -0.33
FARP1-228ENST00000600032 CRB1P82279 1406 aa12.99□□□□□ -0.33
FARP1-228ENST00000600032 CPSF1Q10570 1443 aaKnown RBP12.98□□□□□ -0.33
FARP1-228ENST00000600032 FAM182BQ5T319 152 aa12.98□□□□□ -0.33
FARP1-228ENST00000600032 HDGFL2Q7Z4V5 671 aaPredicted RBP12.98□□□□□ -0.33
FARP1-228ENST00000600032 MON2Q7Z3U7 1717 aa12.98□□□□□ -0.33
FARP1-228ENST00000600032 PARD3Q8TEW0 1356 aa12.97□□□□□ -0.33
FARP1-228ENST00000600032 TNS1Q9HBL0 1735 aaKnown RBP12.97□□□□□ -0.33
FARP1-228ENST00000600032 PARP4Q9UKK3 1724 aaKnown RBP12.97□□□□□ -0.33
FARP1-228ENST00000600032 TOM1L2Q6ZVM7 507 aa12.97□□□□□ -0.33
FARP1-228ENST00000600032 PCDHGA4Q9Y5G9 962 aa12.97□□□□□ -0.33
FARP1-228ENST00000600032 ABCC6O95255 1503 aa12.97□□□□□ -0.33
FARP1-228ENST00000600032 TRIM37O94972 964 aa12.96□□□□□ -0.33
FARP1-228ENST00000600032 EN1Q05925 392 aaPredicted RBP12.96□□□□□ -0.33
FARP1-228ENST00000600032 TMC1Q8TDI8 760 aa12.96□□□□□ -0.33
FARP1-228ENST00000600032 KHSRPQ92945 711 aaKnown RBP eCLIP12.96□□□□□ -0.334e-8■■■□□ 17.1
FARP1-228ENST00000600032 PUS7Q96PZ0 661 aaKnown RBP12.96□□□□□ -0.33
FARP1-228ENST00000600032 CDCA7Q9BWT1 371 aaPredicted RBP12.96□□□□□ -0.33
FARP1-228ENST00000600032 TERF2IPQ9NYB0 399 aa12.96□□□□□ -0.33
FARP1-228ENST00000600032 NINLQ9Y2I6 1382 aa12.95□□□□□ -0.34
FARP1-228ENST00000600032 WDR17Q8IZU2 1322 aa12.95□□□□□ -0.34
FARP1-228ENST00000600032 ARHGEF25Q86VW2 580 aa12.95□□□□□ -0.34
FARP1-228ENST00000600032 CSB-PGBD3P0DP91 1061 aa12.94□□□□□ -0.34
FARP1-228ENST00000600032 FOXK1P85037 733 aa12.94□□□□□ -0.34
FARP1-228ENST00000600032 GPHNQ9NQX3 736 aaPredicted RBP12.94□□□□□ -0.34
FARP1-228ENST00000600032 OVOS2A0A0G2JMS6 1433 aa12.94□□□□□ -0.34
FARP1-228ENST00000600032 OVOS2A0A0J9YW53 1432 aa12.94□□□□□ -0.34
FARP1-228ENST00000600032 OVOS2Q6IE36 1432 aa12.94□□□□□ -0.34
FARP1-228ENST00000600032 EDC4Q6P2E9 1401 aaKnown RBP12.94□□□□□ -0.34
FARP1-228ENST00000600032 COL18A1P39060 1754 aa12.94□□□□□ -0.34
FARP1-228ENST00000600032 APBA3O96018 575 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 1601.5 ms