RNA–Protein interactions for RNA: ENST00000600006.5

CHMP2A-205, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-205ENST00000600006 USHBP1Q8N6Y0 703 aa10.93□□□□□ -0.66
CHMP2A-205ENST00000600006 TOGARAM1Q9Y4F4 1720 aa10.92□□□□□ -0.66
CHMP2A-205ENST00000600006 NPC1L1Q9UHC9 1359 aa10.92□□□□□ -0.66
CHMP2A-205ENST00000600006 PAPPAQ13219 1627 aa10.92□□□□□ -0.66
CHMP2A-205ENST00000600006 PLSCR1O15162 318 aa10.92□□□□□ -0.66
CHMP2A-205ENST00000600006 PPM1GO15355 546 aaPredicted RBP10.92□□□□□ -0.66
CHMP2A-205ENST00000600006 PER1O15534 1290 aaPredicted RBP10.92□□□□□ -0.66
CHMP2A-205ENST00000600006 TNNT2P45379 298 aaPredicted RBP10.92□□□□□ -0.66
CHMP2A-205ENST00000600006 MORC1Q86VD1 984 aa10.92□□□□□ -0.66
CHMP2A-205ENST00000600006 LY75O60449 1722 aa10.92□□□□□ -0.66
CHMP2A-205ENST00000600006 PLEKHG2Q9H7P9 1386 aa10.91□□□□□ -0.66
CHMP2A-205ENST00000600006 TATP17735 454 aaPredicted RBP10.91□□□□□ -0.66
CHMP2A-205ENST00000600006 RAPGEF4Q8WZA2 1011 aa10.91□□□□□ -0.66
CHMP2A-205ENST00000600006 KCNQ2O43526 872 aa10.9□□□□□ -0.66
CHMP2A-205ENST00000600006 EIF4A2Q14240 407 aaKnown RBP10.9□□□□□ -0.66
CHMP2A-205ENST00000600006 ZCRB1Q8TBF4 217 aaKnown RBP10.9□□□□□ -0.66
CHMP2A-205ENST00000600006 EYA1Q99502 592 aa10.9□□□□□ -0.66
CHMP2A-205ENST00000600006 ITGB4P16144 1822 aa10.9□□□□□ -0.66
CHMP2A-205ENST00000600006 IGSF1Q8N6C5 1336 aa10.89□□□□□ -0.67
CHMP2A-205ENST00000600006 PCDH11XQ9BZA7 1347 aa10.89□□□□□ -0.67
CHMP2A-205ENST00000600006 PCDH11YQ9BZA8 1340 aa10.89□□□□□ -0.67
CHMP2A-205ENST00000600006 DDX54Q8TDD1 881 aaKnown RBP10.89□□□□□ -0.67
CHMP2A-205ENST00000600006 ACSBG1Q96GR2 724 aa10.89□□□□□ -0.67
CHMP2A-205ENST00000600006 CASZ1Q86V15 1759 aa10.89□□□□□ -0.67
CHMP2A-205ENST00000600006 KAT6BQ8WYB5 2073 aa10.89□□□□□ -0.67
CHMP2A-205ENST00000600006 PSDA5PKW4 1024 aaPredicted RBP10.88□□□□□ -0.67
CHMP2A-205ENST00000600006 QSER1Q2KHR3 1735 aa10.87□□□□□ -0.67
CHMP2A-205ENST00000600006 R3HDM1Q15032 1099 aaKnown RBP10.87□□□□□ -0.67
CHMP2A-205ENST00000600006 COL3A1P02461 1466 aaPredicted RBP10.87□□□□□ -0.67
CHMP2A-205ENST00000600006 CYP27B1O15528 508 aa10.86□□□□□ -0.67
CHMP2A-205ENST00000600006 NBPF14Q5TI25 921 aa10.86□□□□□ -0.67
CHMP2A-205ENST00000600006 PROM2Q8N271 834 aa10.86□□□□□ -0.67
CHMP2A-205ENST00000600006 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.86□□□□□ -0.67
CHMP2A-205ENST00000600006 KDRP35968 1356 aa10.86□□□□□ -0.67
CHMP2A-205ENST00000600006 TXNRD1Q16881 649 aa10.85□□□□□ -0.67
CHMP2A-205ENST00000600006 CC2D1BQ5T0F9 858 aaKnown RBP10.85□□□□□ -0.67
CHMP2A-205ENST00000600006 ANO8Q9HCE9 1232 aaPredicted RBP10.85□□□□□ -0.67
CHMP2A-205ENST00000600006 TUBGCP6Q96RT7 1819 aa10.85□□□□□ -0.67
CHMP2A-205ENST00000600006 IL13P35225 146 aa10.84□□□□□ -0.67
CHMP2A-205ENST00000600006 PRIM1P49642 420 aaKnown RBP10.84□□□□□ -0.67
CHMP2A-205ENST00000600006 SPG7Q9UQ90 795 aa10.84□□□□□ -0.67
CHMP2A-205ENST00000600006 C5P01031 1676 aa10.84□□□□□ -0.67
CHMP2A-205ENST00000600006 TAF1LQ8IZX4 1826 aa10.84□□□□□ -0.67
CHMP2A-205ENST00000600006 MTHFSP49914 203 aa10.83□□□□□ -0.68
CHMP2A-205ENST00000600006 NKX1-1Q15270 411 aaPredicted RBP10.83□□□□□ -0.68
CHMP2A-205ENST00000600006 VIRMAQ69YN4 1812 aaKnown RBP10.83□□□□□ -0.68
CHMP2A-205ENST00000600006 PHKG2P15735 406 aa10.82□□□□□ -0.68
CHMP2A-205ENST00000600006 AEBP1Q8IUX7 1158 aa10.82□□□□□ -0.68
CHMP2A-205ENST00000600006 SYTL4Q96C24 671 aaPredicted RBP10.82□□□□□ -0.68
CHMP2A-205ENST00000600006 SCN11AQ9UI33 1791 aa10.82□□□□□ -0.68
CHMP2A-205ENST00000600006 SLC27A3Q5K4L6 730 aa10.81□□□□□ -0.68
CHMP2A-205ENST00000600006 IFNL2Q8IZJ0 200 aa10.81□□□□□ -0.68
CHMP2A-205ENST00000600006 ADAMTS7Q9UKP4 1686 aa10.81□□□□□ -0.68
CHMP2A-205ENST00000600006 COL24A1Q17RW2 1714 aa10.81□□□□□ -0.68
CHMP2A-205ENST00000600006 ZNF831Q5JPB2 1677 aa10.8□□□□□ -0.68
CHMP2A-205ENST00000600006 SLC15A2Q16348 729 aa10.8□□□□□ -0.68
CHMP2A-205ENST00000600006 SULT6B1Q6IMI4 303 aa10.8□□□□□ -0.68
CHMP2A-205ENST00000600006 LRRC4BQ9NT99 713 aa10.8□□□□□ -0.68
CHMP2A-205ENST00000600006 STK32BQ9NY57 414 aa10.8□□□□□ -0.68
CHMP2A-205ENST00000600006 KDM6AO15550 1401 aaPredicted RBP10.8□□□□□ -0.68
CHMP2A-205ENST00000600006 PALLDQ8WX93 1383 aa10.79□□□□□ -0.68
CHMP2A-205ENST00000600006 DIAPH1O60610 1272 aaKnown RBP10.79□□□□□ -0.68
CHMP2A-205ENST00000600006 AMOTQ4VCS5 1084 aa10.79□□□□□ -0.68
CHMP2A-205ENST00000600006 PLEKHO1Q53GL0 409 aaPredicted RBP10.79□□□□□ -0.68
CHMP2A-205ENST00000600006 C4BP0C0L5 1744 aa10.78□□□□□ -0.68
CHMP2A-205ENST00000600006 CICQ96RK0 1608 aaPredicted RBP10.78□□□□□ -0.68
CHMP2A-205ENST00000600006 CNGB1Q14028 1251 aaPredicted RBP10.78□□□□□ -0.68
CHMP2A-205ENST00000600006 MPRIPQ6WCQ1 1025 aa10.78□□□□□ -0.68
CHMP2A-205ENST00000600006 MRC1P22897 1456 aa10.78□□□□□ -0.68
CHMP2A-205ENST00000600006 HSP90AB1P08238 724 aaKnown RBP10.77□□□□□ -0.69
CHMP2A-205ENST00000600006 ZNF827Q17R98 1081 aa10.77□□□□□ -0.69
CHMP2A-205ENST00000600006 ZNF530Q6P9A1 599 aaPredicted RBP10.77□□□□□ -0.69
CHMP2A-205ENST00000600006 PIGBQ92521 554 aa10.77□□□□□ -0.69
CHMP2A-205ENST00000600006 AKT1S1Q96B36 256 aa10.77□□□□□ -0.69
CHMP2A-205ENST00000600006 CCNL1Q9UK58 526 aaPredicted RBP10.77□□□□□ -0.69
CHMP2A-205ENST00000600006 COL5A3P25940 1745 aaPredicted RBP10.77□□□□□ -0.69
CHMP2A-205ENST00000600006 UBR3Q6ZT12 1888 aa10.76□□□□□ -0.69
CHMP2A-205ENST00000600006 PPP2R1AP30153 589 aa10.76□□□□□ -0.69
CHMP2A-205ENST00000600006 SMARCC1Q92922 1105 aaPredicted RBP10.76□□□□□ -0.69
CHMP2A-205ENST00000600006 DCAF5Q96JK2 942 aa10.76□□□□□ -0.69
CHMP2A-205ENST00000600006 PDGFDQ9GZP0 370 aaPredicted RBP10.76□□□□□ -0.69
CHMP2A-205ENST00000600006 TMOD3Q9NYL9 352 aa10.76□□□□□ -0.69
CHMP2A-205ENST00000600006 ERVV-2B6SEH9 535 aa10.75□□□□□ -0.69
CHMP2A-205ENST00000600006 HMOX1P09601 288 aa10.75□□□□□ -0.69
CHMP2A-205ENST00000600006 KCNQ4P56696 695 aa10.75□□□□□ -0.69
CHMP2A-205ENST00000600006 CFAP53Q96M91 514 aa10.75□□□□□ -0.69
CHMP2A-205ENST00000600006 SPON1Q9HCB6 807 aa10.75□□□□□ -0.69
CHMP2A-205ENST00000600006 SIPA1L3O60292 1781 aaPredicted RBP10.75□□□□□ -0.69
CHMP2A-205ENST00000600006 C1orf141Q5JVX7 400 aa10.74□□□□□ -0.69
CHMP2A-205ENST00000600006 TJP1Q07157 1748 aa10.74□□□□□ -0.69
CHMP2A-205ENST00000600006 PNPLA7Q6ZV29 1317 aa10.74□□□□□ -0.69
CHMP2A-205ENST00000600006 UBR2Q8IWV8 1755 aa10.73□□□□□ -0.69
CHMP2A-205ENST00000600006 U2SURPO15042 1029 aaKnown RBP10.73□□□□□ -0.69
CHMP2A-205ENST00000600006 AKAP4Q5JQC9 854 aa10.73□□□□□ -0.69
CHMP2A-205ENST00000600006 LOC102724428A0A0B4J2F2 783 aa10.72□□□□□ -0.69
CHMP2A-205ENST00000600006 ZBTB7AO95365 584 aa10.72□□□□□ -0.69
CHMP2A-205ENST00000600006 HMGB2P26583 209 aaKnown RBP10.72□□□□□ -0.69
CHMP2A-205ENST00000600006 SIK1P57059 783 aa10.72□□□□□ -0.69
CHMP2A-205ENST00000600006 MTHFSDQ2M296 383 aaKnown RBP10.72□□□□□ -0.69
CHMP2A-205ENST00000600006 MTFR1LQ9H019 292 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms