RNA–Protein interactions for RNA: ENST00000599589.5

ARHGEF1-218, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-218ENST00000599589 PIK3R4Q99570 1358 aa23.74■■□□□ 1.39
ARHGEF1-218ENST00000599589 ZGPATQ8N5A5 531 aaKnown RBP23.74■■□□□ 1.39
ARHGEF1-218ENST00000599589 ZNF428Q96B54 188 aa23.74■■□□□ 1.39
ARHGEF1-218ENST00000599589 USP26Q9BXU7 913 aa23.74■■□□□ 1.39
ARHGEF1-218ENST00000599589 PTCH1Q13635 1447 aa23.74■■□□□ 1.39
ARHGEF1-218ENST00000599589 VAMP4O75379 141 aa23.74■■□□□ 1.39
ARHGEF1-218ENST00000599589 PRDM4Q9UKN5 801 aa23.74■■□□□ 1.39
ARHGEF1-218ENST00000599589 TSPYL6Q8N831 410 aa23.73■■□□□ 1.39
ARHGEF1-218ENST00000599589 ARHGAP45Q92619 1136 aa23.73■■□□□ 1.39
ARHGEF1-218ENST00000599589 CHAMP1Q96JM3 812 aa23.72■■□□□ 1.39
ARHGEF1-218ENST00000599589 ELL2O00472 640 aaPredicted RBP23.72■■□□□ 1.39
ARHGEF1-218ENST00000599589 ARID3AQ99856 593 aa23.72■■□□□ 1.39
ARHGEF1-218ENST00000599589 CWC22Q9HCG8 908 aaKnown RBP23.72■■□□□ 1.39
ARHGEF1-218ENST00000599589 TTC22Q5TAA0 569 aa23.71■■□□□ 1.39
ARHGEF1-218ENST00000599589 THUMPD2Q9BTF0 503 aaKnown RBP23.71■■□□□ 1.39
ARHGEF1-218ENST00000599589 KNDC1Q76NI1 1749 aa23.71■■□□□ 1.39
ARHGEF1-218ENST00000599589 SYCE3A1L190 88 aa23.71■■□□□ 1.39
ARHGEF1-218ENST00000599589 TMEM63CQ9P1W3 806 aa23.71■■□□□ 1.39
ARHGEF1-218ENST00000599589 ZDHHC9Q9Y397 364 aa23.71■■□□□ 1.39
ARHGEF1-218ENST00000599589 ABCC4O15439 1325 aa23.71■■□□□ 1.39
ARHGEF1-218ENST00000599589 CSPP1Q1MSJ5 1256 aa23.7■■□□□ 1.38
ARHGEF1-218ENST00000599589 LRSAM1Q6UWE0 723 aa23.7■■□□□ 1.38
ARHGEF1-218ENST00000599589 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.7■■□□□ 1.38
ARHGEF1-218ENST00000599589 C16orf71Q8IYS4 520 aaPredicted RBP23.7■■□□□ 1.38
ARHGEF1-218ENST00000599589 LRRC7Q96NW7 1537 aa23.7■■□□□ 1.38
ARHGEF1-218ENST00000599589 PRKAR2BP31323 418 aa23.69■■□□□ 1.38
ARHGEF1-218ENST00000599589 NSFL1CQ9UNZ2 370 aaKnown RBP23.69■■□□□ 1.38
ARHGEF1-218ENST00000599589 CPS1P31327 1500 aa23.69■■□□□ 1.38
ARHGEF1-218ENST00000599589 PNPLA6Q8IY17 1366 aa23.69■■□□□ 1.38
ARHGEF1-218ENST00000599589 KIF20BQ96Q89 1820 aa23.69■■□□□ 1.38
ARHGEF1-218ENST00000599589 CPSF1Q10570 1443 aaKnown RBP23.69■■□□□ 1.38
ARHGEF1-218ENST00000599589 CEBPAP49715 358 aaPredicted RBP23.68■■□□□ 1.38
ARHGEF1-218ENST00000599589 NUDT16Q96DE0 195 aaKnown RBP23.68■■□□□ 1.38
ARHGEF1-218ENST00000599589 DYNC1I1O14576 645 aa23.68■■□□□ 1.38
ARHGEF1-218ENST00000599589 MCM5P33992 734 aa23.68■■□□□ 1.38
ARHGEF1-218ENST00000599589 CCDC39Q9UFE4 941 aa23.68■■□□□ 1.38
ARHGEF1-218ENST00000599589 PLEKHG1Q9ULL1 1385 aa23.68■■□□□ 1.38
ARHGEF1-218ENST00000599589 ADAMTS13Q76LX8 1427 aa23.68■■□□□ 1.38
ARHGEF1-218ENST00000599589 FCHSD2O94868 740 aa23.67■■□□□ 1.38
ARHGEF1-218ENST00000599589 INTS3Q68E01 1043 aaKnown RBP23.67■■□□□ 1.38
ARHGEF1-218ENST00000599589 ST18O60284 1047 aa23.67■■□□□ 1.38
ARHGEF1-218ENST00000599589 CFAP44Q96MT7 982 aa23.67■■□□□ 1.38
ARHGEF1-218ENST00000599589 CCDC61Q9Y6R9 512 aa23.67■■□□□ 1.38
ARHGEF1-218ENST00000599589 LTKP29376 864 aa23.66■■□□□ 1.38
ARHGEF1-218ENST00000599589 EDC4Q6P2E9 1401 aaKnown RBP23.66■■□□□ 1.38
ARHGEF1-218ENST00000599589 FOXD4L5Q5VV16 416 aaPredicted RBP23.65■■□□□ 1.38
ARHGEF1-218ENST00000599589 SASS6Q6UVJ0 657 aa23.65■■□□□ 1.38
ARHGEF1-218ENST00000599589 FOXD4L4Q8WXT5 416 aaPredicted RBP23.65■■□□□ 1.38
ARHGEF1-218ENST00000599589 RNF214Q8ND24 703 aa23.65■■□□□ 1.38
ARHGEF1-218ENST00000599589 DCTPP1Q9H773 170 aa23.65■■□□□ 1.38
ARHGEF1-218ENST00000599589 OTUD7AQ8TE49 926 aaPredicted RBP23.64■■□□□ 1.38
ARHGEF1-218ENST00000599589 EID1Q9Y6B2 187 aa23.64■■□□□ 1.37
ARHGEF1-218ENST00000599589 PHACTR3Q96KR7 559 aa23.63■■□□□ 1.37
ARHGEF1-218ENST00000599589 MTERF4Q7Z6M4 381 aaKnown RBP23.63■■□□□ 1.37
ARHGEF1-218ENST00000599589 ROBO2Q9HCK4 1378 aa23.63■■□□□ 1.37
ARHGEF1-218ENST00000599589 MBIPQ9NS73 344 aa23.62■■□□□ 1.37
ARHGEF1-218ENST00000599589 POLKQ9UBT6 870 aa23.62■■□□□ 1.37
ARHGEF1-218ENST00000599589 SDSP20132 328 aa23.62■■□□□ 1.37
ARHGEF1-218ENST00000599589 HMOX1P09601 288 aa23.61■■□□□ 1.37
ARHGEF1-218ENST00000599589 NFE2L2Q16236 605 aa23.61■■□□□ 1.37
ARHGEF1-218ENST00000599589 TWISTNBQ3B726 338 aaPredicted RBP23.61■■□□□ 1.37
ARHGEF1-218ENST00000599589 GNAI1P63096 354 aa23.61■■□□□ 1.37
ARHGEF1-218ENST00000599589 FBLN1P23142 703 aa23.6■■□□□ 1.37
ARHGEF1-218ENST00000599589 API5Q9BZZ5 524 aaKnown RBP23.6■■□□□ 1.37
ARHGEF1-218ENST00000599589 CASC1Q6TDU7 716 aa23.6■■□□□ 1.37
ARHGEF1-218ENST00000599589 CDC42BPGQ6DT37 1551 aa23.6■■□□□ 1.37
ARHGEF1-218ENST00000599589 IFT57Q9NWB7 429 aa23.59■■□□□ 1.37
ARHGEF1-218ENST00000599589 PTMAP06454 111 aaKnown RBP23.59■■□□□ 1.37
ARHGEF1-218ENST00000599589 SMAP1Q8IYB5 467 aaPredicted RBP23.59■■□□□ 1.37
ARHGEF1-218ENST00000599589 C8orf58Q8NAV2 365 aa23.59■■□□□ 1.37
ARHGEF1-218ENST00000599589 C3P01024 1663 aa23.58■■□□□ 1.37
ARHGEF1-218ENST00000599589 NCKAP5LQ9HCH0 1330 aa23.58■■□□□ 1.37
ARHGEF1-218ENST00000599589 ZBTB7CA1YPR0 619 aa23.58■■□□□ 1.37
ARHGEF1-218ENST00000599589 APBB1O00213 710 aa23.58■■□□□ 1.37
ARHGEF1-218ENST00000599589 NME9Q86XW9 330 aa23.58■■□□□ 1.37
ARHGEF1-218ENST00000599589 SMARCA5O60264 1052 aaPredicted RBP23.57■■□□□ 1.36
ARHGEF1-218ENST00000599589 MBD3O95983 291 aa23.57■■□□□ 1.36
ARHGEF1-218ENST00000599589 PRR36Q9H6K5 1346 aa23.57■■□□□ 1.36
ARHGEF1-218ENST00000599589 TRHP20396 242 aaPredicted RBP23.56■■□□□ 1.36
ARHGEF1-218ENST00000599589 SLC26A8Q96RN1 970 aa23.56■■□□□ 1.36
ARHGEF1-218ENST00000599589 SLIT1O75093 1534 aa23.56■■□□□ 1.36
ARHGEF1-218ENST00000599589 ARHGAP23Q9P227 1491 aa23.56■■□□□ 1.36
ARHGEF1-218ENST00000599589 ZNF853P0CG23 659 aa23.56■■□□□ 1.36
ARHGEF1-218ENST00000599589 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP23.56■■□□□ 1.36
ARHGEF1-218ENST00000599589 COG3Q96JB2 828 aa23.55■■□□□ 1.36
ARHGEF1-218ENST00000599589 PRDM10Q9NQV6 1147 aa23.55■■□□□ 1.36
ARHGEF1-218ENST00000599589 REC8O95072 547 aa23.55■■□□□ 1.36
ARHGEF1-218ENST00000599589 KIAA2012Q0VF49 1180 aa23.55■■□□□ 1.36
ARHGEF1-218ENST00000599589 PLPPR3Q6T4P5 718 aa23.55■■□□□ 1.36
ARHGEF1-218ENST00000599589 THEMISQ8N1K5 641 aaPredicted RBP23.55■■□□□ 1.36
ARHGEF1-218ENST00000599589 TSPY26PQ9H489 355 aa23.55■■□□□ 1.36
ARHGEF1-218ENST00000599589 AATKQ6ZMQ8 1374 aa23.55■■□□□ 1.36
ARHGEF1-218ENST00000599589 ANKRD44Q8N8A2 993 aa23.54■■□□□ 1.36
ARHGEF1-218ENST00000599589 TBX22Q9Y458 520 aa23.54■■□□□ 1.36
ARHGEF1-218ENST00000599589 FER1L4A9Z1Z3 1794 aa23.53■■□□□ 1.36
ARHGEF1-218ENST00000599589 MON2Q7Z3U7 1717 aa23.53■■□□□ 1.36
ARHGEF1-218ENST00000599589 JARID2Q92833 1246 aaPredicted RBP23.52■■□□□ 1.36
ARHGEF1-218ENST00000599589 TMX3Q96JJ7 454 aa23.52■■□□□ 1.36
ARHGEF1-218ENST00000599589 ZRANB1Q9UGI0 708 aa23.52■■□□□ 1.36
ARHGEF1-218ENST00000599589 ATP10DQ9P241 1426 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms