RNA–Protein interactions for RNA: ENST00000599563.5

SH2D3A-208, Transcript of SH2 domain containing 3A, humanhuman

TSL 3

Gene SH2D3A, Length 845 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-208ENST00000599563 DDX10Q13206 875 aaKnown RBP17.5■□□□□ 0.39
SH2D3A-208ENST00000599563 DDX54Q8TDD1 881 aaKnown RBP17.5■□□□□ 0.39
SH2D3A-208ENST00000599563 EMILIN1Q9Y6C2 1016 aa17.5■□□□□ 0.39
SH2D3A-208ENST00000599563 MEGF6O75095 1541 aa17.5■□□□□ 0.39
SH2D3A-208ENST00000599563 DOT1LQ8TEK3 1739 aa17.49■□□□□ 0.39
SH2D3A-208ENST00000599563 PPM1GO15355 546 aaPredicted RBP17.48■□□□□ 0.39
SH2D3A-208ENST00000599563 PTF1AQ7RTS3 328 aa17.48■□□□□ 0.39
SH2D3A-208ENST00000599563 KNSTRNQ9Y448 316 aa17.48■□□□□ 0.39
SH2D3A-208ENST00000599563 KCNQ2O43526 872 aa17.47■□□□□ 0.39
SH2D3A-208ENST00000599563 TXNRD1Q16881 649 aa17.47■□□□□ 0.39
SH2D3A-208ENST00000599563 ACSBG1Q96GR2 724 aa17.47■□□□□ 0.39
SH2D3A-208ENST00000599563 POLKQ9UBT6 870 aa17.47■□□□□ 0.39
SH2D3A-208ENST00000599563 PKD1L3Q7Z443 1732 aa17.47■□□□□ 0.39
SH2D3A-208ENST00000599563 NCAPD2Q15021 1401 aa17.47■□□□□ 0.39
SH2D3A-208ENST00000599563 PCDH11XQ9BZA7 1347 aa17.46■□□□□ 0.38
SH2D3A-208ENST00000599563 PCDH11YQ9BZA8 1340 aa17.46■□□□□ 0.38
SH2D3A-208ENST00000599563 SRCAPQ6ZRS2 3230 aa17.45■□□□□ 0.38
SH2D3A-208ENST00000599563 PLEKHG2Q9H7P9 1386 aa17.45■□□□□ 0.38
SH2D3A-208ENST00000599563 USHBP1Q8N6Y0 703 aa17.45■□□□□ 0.38
SH2D3A-208ENST00000599563 MORC1Q86VD1 984 aa17.44■□□□□ 0.38
SH2D3A-208ENST00000599563 STK32BQ9NY57 414 aa17.44■□□□□ 0.38
SH2D3A-208ENST00000599563 TNNT2P45379 298 aaPredicted RBP17.43■□□□□ 0.38
SH2D3A-208ENST00000599563 PROM2Q8N271 834 aa17.43■□□□□ 0.38
SH2D3A-208ENST00000599563 PER1O15534 1290 aaPredicted RBP17.42■□□□□ 0.38
SH2D3A-208ENST00000599563 HMGB2P26583 209 aaKnown RBP17.42■□□□□ 0.38
SH2D3A-208ENST00000599563 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.42■□□□□ 0.38
SH2D3A-208ENST00000599563 CASZ1Q86V15 1759 aa17.42■□□□□ 0.38
SH2D3A-208ENST00000599563 LY75O60449 1722 aa17.41■□□□□ 0.38
SH2D3A-208ENST00000599563 SLC27A3Q5K4L6 730 aa17.41■□□□□ 0.38
SH2D3A-208ENST00000599563 SYTL4Q96C24 671 aaPredicted RBP17.41■□□□□ 0.38
SH2D3A-208ENST00000599563 SPG7Q9UQ90 795 aa17.41■□□□□ 0.38
SH2D3A-208ENST00000599563 PAPPAQ13219 1627 aa17.4■□□□□ 0.38
SH2D3A-208ENST00000599563 PRIM1P49642 420 aaKnown RBP17.4■□□□□ 0.38
SH2D3A-208ENST00000599563 SPON1Q9HCB6 807 aa17.4■□□□□ 0.38
SH2D3A-208ENST00000599563 QSER1Q2KHR3 1735 aa17.39■□□□□ 0.37
SH2D3A-208ENST00000599563 SLC15A2Q16348 729 aa17.39■□□□□ 0.37
SH2D3A-208ENST00000599563 EYA1Q99502 592 aa17.39■□□□□ 0.37
SH2D3A-208ENST00000599563 ANO8Q9HCE9 1232 aaPredicted RBP17.39■□□□□ 0.37
SH2D3A-208ENST00000599563 ITGB4P16144 1822 aa17.38■□□□□ 0.37
SH2D3A-208ENST00000599563 EIF4A2Q14240 407 aaKnown RBP17.38■□□□□ 0.37
SH2D3A-208ENST00000599563 AMER1Q5JTC6 1135 aaPredicted RBP17.37■□□□□ 0.37
SH2D3A-208ENST00000599563 CNGB1Q14028 1251 aaPredicted RBP17.36■□□□□ 0.37
SH2D3A-208ENST00000599563 IGSF1Q8N6C5 1336 aa17.36■□□□□ 0.37
SH2D3A-208ENST00000599563 CYP27B1O15528 508 aa17.35■□□□□ 0.37
SH2D3A-208ENST00000599563 NKX1-1Q15270 411 aaPredicted RBP17.35■□□□□ 0.37
SH2D3A-208ENST00000599563 NPC1L1Q9UHC9 1359 aa17.35■□□□□ 0.37
SH2D3A-208ENST00000599563 PPP1R1BQ9UD71 204 aaPredicted RBP17.34■□□□□ 0.37
SH2D3A-208ENST00000599563 TOGARAM1Q9Y4F4 1720 aa17.34■□□□□ 0.37
SH2D3A-208ENST00000599563 CC2D1BQ5T0F9 858 aaKnown RBP17.33■□□□□ 0.36
SH2D3A-208ENST00000599563 IFNL2Q8IZJ0 200 aa17.33■□□□□ 0.36
SH2D3A-208ENST00000599563 SMARCC1Q92922 1105 aaPredicted RBP17.33■□□□□ 0.36
SH2D3A-208ENST00000599563 LRRC4BQ9NT99 713 aa17.32■□□□□ 0.36
SH2D3A-208ENST00000599563 AMOTQ4VCS5 1084 aa17.31■□□□□ 0.36
SH2D3A-208ENST00000599563 MTFR1LQ9H019 292 aa17.31■□□□□ 0.36
SH2D3A-208ENST00000599563 CCNL1Q9UK58 526 aaPredicted RBP17.31■□□□□ 0.36
SH2D3A-208ENST00000599563 C5P01031 1676 aa17.31■□□□□ 0.36
SH2D3A-208ENST00000599563 HSP90AB1P08238 724 aaKnown RBP17.3■□□□□ 0.36
SH2D3A-208ENST00000599563 PLEKHO1Q53GL0 409 aaPredicted RBP17.3■□□□□ 0.36
SH2D3A-208ENST00000599563 MPRIPQ6WCQ1 1025 aa17.3■□□□□ 0.36
SH2D3A-208ENST00000599563 TAF1LQ8IZX4 1826 aa17.3■□□□□ 0.36
SH2D3A-208ENST00000599563 PHKG2P15735 406 aa17.29■□□□□ 0.36
SH2D3A-208ENST00000599563 SLC16A10Q8TF71 515 aa17.29■□□□□ 0.36
SH2D3A-208ENST00000599563 AKT1S1Q96B36 256 aa17.29■□□□□ 0.36
SH2D3A-208ENST00000599563 KDRP35968 1356 aa17.28■□□□□ 0.36
SH2D3A-208ENST00000599563 TUBGCP6Q96RT7 1819 aa17.28■□□□□ 0.36
SH2D3A-208ENST00000599563 ZBTB7AO95365 584 aa17.28■□□□□ 0.36
SH2D3A-208ENST00000599563 TMOD3Q9NYL9 352 aa17.28■□□□□ 0.36
SH2D3A-208ENST00000599563 PALLDQ8WX93 1383 aa17.28■□□□□ 0.36
SH2D3A-208ENST00000599563 MTHFSP49914 203 aa17.27■□□□□ 0.36
SH2D3A-208ENST00000599563 ZNF827Q17R98 1081 aa17.27■□□□□ 0.36
SH2D3A-208ENST00000599563 TFCP2L1Q9NZI6 479 aa17.27■□□□□ 0.36
SH2D3A-208ENST00000599563 IL13P35225 146 aa17.26■□□□□ 0.35
SH2D3A-208ENST00000599563 DIEXFQ68CQ4 756 aaKnown RBP17.26■□□□□ 0.35
SH2D3A-208ENST00000599563 DCAF5Q96JK2 942 aa17.26■□□□□ 0.35
SH2D3A-208ENST00000599563 PDGFDQ9GZP0 370 aaPredicted RBP17.26■□□□□ 0.35
SH2D3A-208ENST00000599563 COL24A1Q17RW2 1714 aa17.25■□□□□ 0.35
SH2D3A-208ENST00000599563 C1orf141Q5JVX7 400 aa17.25■□□□□ 0.35
SH2D3A-208ENST00000599563 SULT6B1Q6IMI4 303 aa17.25■□□□□ 0.35
SH2D3A-208ENST00000599563 PIGBQ92521 554 aa17.25■□□□□ 0.35
SH2D3A-208ENST00000599563 DCAF8L1A6NGE4 600 aa17.24■□□□□ 0.35
SH2D3A-208ENST00000599563 ERVV-2B6SEH9 535 aa17.24■□□□□ 0.35
SH2D3A-208ENST00000599563 ZNF530Q6P9A1 599 aaPredicted RBP17.24■□□□□ 0.35
SH2D3A-208ENST00000599563 ATF5Q9Y2D1 282 aaPredicted RBP17.24■□□□□ 0.35
SH2D3A-208ENST00000599563 ZNF831Q5JPB2 1677 aa17.23■□□□□ 0.35
SH2D3A-208ENST00000599563 DIAPH1O60610 1272 aaKnown RBP17.23■□□□□ 0.35
SH2D3A-208ENST00000599563 PTGER2P43116 358 aa17.23■□□□□ 0.35
SH2D3A-208ENST00000599563 FLAD1Q8NFF5 587 aa17.23■□□□□ 0.35
SH2D3A-208ENST00000599563 PNPLA7Q6ZV29 1317 aa17.22■□□□□ 0.35
SH2D3A-208ENST00000599563 C4BP0C0L5 1744 aa17.22■□□□□ 0.35
SH2D3A-208ENST00000599563 AEBP1Q8IUX7 1158 aa17.22■□□□□ 0.35
SH2D3A-208ENST00000599563 PRKRIP1Q9H875 184 aaPredicted RBP17.22■□□□□ 0.35
SH2D3A-208ENST00000599563 SCN11AQ9UI33 1791 aa17.22■□□□□ 0.35
SH2D3A-208ENST00000599563 KCNQ4P56696 695 aa17.21■□□□□ 0.35
SH2D3A-208ENST00000599563 POLD1P28340 1107 aa17.2■□□□□ 0.34
SH2D3A-208ENST00000599563 SGIP1Q9BQI5 828 aa17.2■□□□□ 0.34
SH2D3A-208ENST00000599563 VIRMAQ69YN4 1812 aaKnown RBP17.19■□□□□ 0.34
SH2D3A-208ENST00000599563 UBR3Q6ZT12 1888 aa17.19■□□□□ 0.34
SH2D3A-208ENST00000599563 LOC102724428A0A0B4J2F2 783 aa17.19■□□□□ 0.34
SH2D3A-208ENST00000599563 SIK1P57059 783 aa17.19■□□□□ 0.34
SH2D3A-208ENST00000599563 CFAP53Q96M91 514 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms