RNA–Protein interactions for RNA: ENST00000599389.1

CEACAM1-213, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 5 BASIC

Gene CEACAM1, Length 1,342 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-213ENST00000599389 CSB-PGBD3P0DP91 1061 aa10.42□□□□□ -0.74
CEACAM1-213ENST00000599389 TNS4Q8IZW8 715 aa10.42□□□□□ -0.74
CEACAM1-213ENST00000599389 KLRG1Q96E93 195 aa10.42□□□□□ -0.74
CEACAM1-213ENST00000599389 KIF13BQ9NQT8 1826 aa10.41□□□□□ -0.74
CEACAM1-213ENST00000599389 MON2Q7Z3U7 1717 aa10.41□□□□□ -0.74
CEACAM1-213ENST00000599389 COL23A1Q86Y22 540 aaPredicted RBP10.41□□□□□ -0.74
CEACAM1-213ENST00000599389 KCNH5Q8NCM2 988 aa10.41□□□□□ -0.74
CEACAM1-213ENST00000599389 UBR3Q6ZT12 1888 aa10.4□□□□□ -0.74
CEACAM1-213ENST00000599389 ANKRD36BQ8N2N9 1353 aa10.4□□□□□ -0.74
CEACAM1-213ENST00000599389 IL2RBP14784 551 aa10.4□□□□□ -0.74
CEACAM1-213ENST00000599389 KCNQ4P56696 695 aa10.4□□□□□ -0.74
CEACAM1-213ENST00000599389 DCAF11Q8TEB1 546 aa10.4□□□□□ -0.74
CEACAM1-213ENST00000599389 CABP2Q9NPB3 220 aa10.39□□□□□ -0.75
CEACAM1-213ENST00000599389 BRCA1P38398 1863 aaKnown RBP10.39□□□□□ -0.75
CEACAM1-213ENST00000599389 IGSF1Q8N6C5 1336 aa10.39□□□□□ -0.75
CEACAM1-213ENST00000599389 PKD1L3Q7Z443 1732 aa10.38□□□□□ -0.75
CEACAM1-213ENST00000599389 SRPK2P78362 688 aaKnown RBP10.38□□□□□ -0.75
CEACAM1-213ENST00000599389 MSL1Q68DK7 614 aa10.38□□□□□ -0.75
CEACAM1-213ENST00000599389 PPP4R3CPQ6ZMV5 832 aa10.38□□□□□ -0.75
CEACAM1-213ENST00000599389 CABP1Q9NZU7 370 aa10.38□□□□□ -0.75
CEACAM1-213ENST00000599389 KDM2AQ9Y2K7 1162 aa10.38□□□□□ -0.75
CEACAM1-213ENST00000599389 TTC21BQ7Z4L5 1316 aa10.38□□□□□ -0.75
CEACAM1-213ENST00000599389 C10orf71Q711Q0 1435 aa10.37□□□□□ -0.75
CEACAM1-213ENST00000599389 RBM46Q8TBY0 533 aaKnown RBP10.37□□□□□ -0.75
CEACAM1-213ENST00000599389 TTC21AQ8NDW8 1320 aa10.37□□□□□ -0.75
CEACAM1-213ENST00000599389 HTRA3P83110 453 aa10.36□□□□□ -0.75
CEACAM1-213ENST00000599389 RNF216Q9NWF9 866 aaPredicted RBP10.36□□□□□ -0.75
CEACAM1-213ENST00000599389 C4BP0C0L5 1744 aa10.36□□□□□ -0.75
CEACAM1-213ENST00000599389 USP31Q70CQ4 1352 aa10.36□□□□□ -0.75
CEACAM1-213ENST00000599389 TNRC6CQ9HCJ0 1690 aaKnown RBP10.36□□□□□ -0.75
CEACAM1-213ENST00000599389 NMRK2Q9NPI5 230 aa10.35□□□□□ -0.75
CEACAM1-213ENST00000599389 NLRP2Q9NX02 1062 aa10.35□□□□□ -0.75
CEACAM1-213ENST00000599389 CCNL1Q9UK58 526 aaPredicted RBP10.35□□□□□ -0.75
CEACAM1-213ENST00000599389 CENPJQ9HC77 1338 aaPredicted RBP10.35□□□□□ -0.75
CEACAM1-213ENST00000599389 PXDNLA1KZ92 1463 aa10.35□□□□□ -0.75
CEACAM1-213ENST00000599389 ARFGEF1Q9Y6D6 1849 aa10.35□□□□□ -0.75
CEACAM1-213ENST00000599389 SOX12O15370 315 aa10.34□□□□□ -0.75
CEACAM1-213ENST00000599389 CNKSR2Q8WXI2 1034 aa10.34□□□□□ -0.75
CEACAM1-213ENST00000599389 N4BP2Q86UW6 1770 aaPredicted RBP10.34□□□□□ -0.75
CEACAM1-213ENST00000599389 PRIM1P49642 420 aaKnown RBP10.33□□□□□ -0.76
CEACAM1-213ENST00000599389 FSTL1Q12841 308 aa10.33□□□□□ -0.76
CEACAM1-213ENST00000599389 RGPD2P0DJD1 1756 aa10.33□□□□□ -0.76
CEACAM1-213ENST00000599389 MAP2P11137 1827 aaKnown RBP10.33□□□□□ -0.76
CEACAM1-213ENST00000599389 AMIGO3Q86WK7 504 aa10.33□□□□□ -0.76
CEACAM1-213ENST00000599389 WWC3Q9ULE0 1092 aa10.33□□□□□ -0.76
CEACAM1-213ENST00000599389 MEGF6O75095 1541 aa10.32□□□□□ -0.76
CEACAM1-213ENST00000599389 NBPF1Q3BBV0 1214 aa10.32□□□□□ -0.76
CEACAM1-213ENST00000599389 FLAD1Q8NFF5 587 aa10.32□□□□□ -0.76
CEACAM1-213ENST00000599389 ANKRD24Q8TF21 1146 aa10.32□□□□□ -0.76
CEACAM1-213ENST00000599389 ZNF692Q9BU19 519 aaPredicted RBP10.32□□□□□ -0.76
CEACAM1-213ENST00000599389 USP47Q96K76 1375 aa10.31□□□□□ -0.76
CEACAM1-213ENST00000599389 PLEKHG2Q9H7P9 1386 aa10.31□□□□□ -0.76
CEACAM1-213ENST00000599389 CD163L1Q9NR16 1453 aa10.31□□□□□ -0.76
CEACAM1-213ENST00000599389 PCDH10Q9P2E7 1040 aa10.31□□□□□ -0.76
CEACAM1-213ENST00000599389 SBF1O95248 1867 aa10.3□□□□□ -0.76
CEACAM1-213ENST00000599389 ITGB4P16144 1822 aa10.3□□□□□ -0.76
CEACAM1-213ENST00000599389 SBNO2Q9Y2G9 1366 aa10.3□□□□□ -0.76
CEACAM1-213ENST00000599389 HSPA1AP0DMV8 641 aaKnown RBP10.3□□□□□ -0.76
CEACAM1-213ENST00000599389 HSPA1BP0DMV9 641 aaKnown RBP10.3□□□□□ -0.76
CEACAM1-213ENST00000599389 DDX54Q8TDD1 881 aaKnown RBP10.3□□□□□ -0.76
CEACAM1-213ENST00000599389 SYTL4Q96C24 671 aaPredicted RBP10.3□□□□□ -0.76
CEACAM1-213ENST00000599389 TNRC18O15417 2968 aaPredicted RBP10.29□□□□□ -0.76
CEACAM1-213ENST00000599389 KCPQ6ZWJ8 1503 aa10.29□□□□□ -0.76
CEACAM1-213ENST00000599389 NSD3Q9BZ95 1437 aa10.29□□□□□ -0.76
CEACAM1-213ENST00000599389 KTN1Q86UP2 1357 aaKnown RBP10.29□□□□□ -0.76
CEACAM1-213ENST00000599389 RAB3GAP2Q9H2M9 1393 aa10.29□□□□□ -0.76
CEACAM1-213ENST00000599389 PALLDQ8WX93 1383 aa10.27□□□□□ -0.77
CEACAM1-213ENST00000599389 EVC2Q86UK5 1308 aa10.27□□□□□ -0.77
CEACAM1-213ENST00000599389 RTN4Q9NQC3 1192 aaKnown RBP10.26□□□□□ -0.77
CEACAM1-213ENST00000599389 C4AP0C0L4 1744 aa10.26□□□□□ -0.77
CEACAM1-213ENST00000599389 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.25□□□□□ -0.77
CEACAM1-213ENST00000599389 HMGB2P26583 209 aaKnown RBP10.25□□□□□ -0.77
CEACAM1-213ENST00000599389 SSFA2P28290 1259 aa10.25□□□□□ -0.77
CEACAM1-213ENST00000599389 NME9Q86XW9 330 aa10.25□□□□□ -0.77
CEACAM1-213ENST00000599389 ZCRB1Q8TBF4 217 aaKnown RBP10.25□□□□□ -0.77
CEACAM1-213ENST00000599389 IP6K1Q92551 441 aa10.25□□□□□ -0.77
CEACAM1-213ENST00000599389 AMER1Q5JTC6 1135 aaPredicted RBP10.24□□□□□ -0.77
CEACAM1-213ENST00000599389 C16orf71Q8IYS4 520 aaPredicted RBP10.24□□□□□ -0.77
CEACAM1-213ENST00000599389 PDE4DIPQ5VU43 2346 aa10.23□□□□□ -0.77
CEACAM1-213ENST00000599389 TGFB2P61812 414 aa10.23□□□□□ -0.77
CEACAM1-213ENST00000599389 C9orf131Q5VYM1 1079 aa10.23□□□□□ -0.77
CEACAM1-213ENST00000599389 SMIM5Q71RC9 77 aa10.23□□□□□ -0.77
CEACAM1-213ENST00000599389 SMC1BQ8NDV3 1235 aa10.23□□□□□ -0.77
CEACAM1-213ENST00000599389 AK7Q96M32 723 aa10.23□□□□□ -0.77
CEACAM1-213ENST00000599389 BCS1LQ9Y276 419 aa10.23□□□□□ -0.77
CEACAM1-213ENST00000599389 KDM6AO15550 1401 aaPredicted RBP10.23□□□□□ -0.77
CEACAM1-213ENST00000599389 EDC4Q6P2E9 1401 aaKnown RBP10.23□□□□□ -0.77
CEACAM1-213ENST00000599389 KDM2BQ8NHM5 1336 aa10.22□□□□□ -0.77
CEACAM1-213ENST00000599389 TIAM2Q8IVF5 1701 aa10.21□□□□□ -0.77
CEACAM1-213ENST00000599389 CGNL1Q0VF96 1302 aa10.21□□□□□ -0.77
CEACAM1-213ENST00000599389 ZNF831Q5JPB2 1677 aa10.21□□□□□ -0.77
CEACAM1-213ENST00000599389 PHF14O94880 888 aa10.21□□□□□ -0.78
CEACAM1-213ENST00000599389 MMP10P09238 476 aa10.21□□□□□ -0.78
CEACAM1-213ENST00000599389 ARHGAP27Q6ZUM4 889 aa10.21□□□□□ -0.78
CEACAM1-213ENST00000599389 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.21□□□□□ -0.783e-8■■□□□ 12.2
CEACAM1-213ENST00000599389 COL5A3P25940 1745 aaPredicted RBP10.21□□□□□ -0.78
CEACAM1-213ENST00000599389 A0A0G2JLW4 131 aa10.2□□□□□ -0.78
CEACAM1-213ENST00000599389 KCNA3P22001 575 aa10.2□□□□□ -0.78
CEACAM1-213ENST00000599389 LINC00116Q8NCU8 138 aa10.2□□□□□ -0.78
CEACAM1-213ENST00000599389 DCAF5Q96JK2 942 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms