RNA–Protein interactions for RNA: ENST00000599082.1

SOX2-OT-231, SOX2 overlapping transcript, human

TSL 5

Gene SOX2-OT, Length 839 nt, Biotype sense overlapping.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SOX2-OT-231	ENST00000599082	PDIA4	P13667	645 aa	Known RBP	12	□□□□□ -0.49
SOX2-OT-231	ENST00000599082	LARP1	Q6PKG0	1096 aa	Known RBP	12	□□□□□ -0.49
SOX2-OT-231	ENST00000599082	SIRT1	Q96EB6	747 aa		12	□□□□□ -0.49
SOX2-OT-231	ENST00000599082	ZMIZ1	Q9ULJ6	1067 aa		12	□□□□□ -0.49
SOX2-OT-231	ENST00000599082	ERVK-9	P63128	1117 aa		11.99	□□□□□ -0.49
SOX2-OT-231	ENST00000599082	GTF2I	P78347	998 aa		11.99	□□□□□ -0.49
SOX2-OT-231	ENST00000599082	PPP1R26	Q5T8A7	1209 aa	Predicted RBP	11.99	□□□□□ -0.49
SOX2-OT-231	ENST00000599082	TRIM67	Q6ZTA4	783 aa		11.99	□□□□□ -0.49
SOX2-OT-231	ENST00000599082	NOVA2	Q9UNW9	492 aa	Known RBP	11.99	□□□□□ -0.49
SOX2-OT-231	ENST00000599082	TNFRSF10A	O00220	468 aa		11.98	□□□□□ -0.49
SOX2-OT-231	ENST00000599082	ZBTB7B	O15156	539 aa	Predicted RBP	11.98	□□□□□ -0.49
SOX2-OT-231	ENST00000599082	ATP1A2	P50993	1020 aa		11.98	□□□□□ -0.49
SOX2-OT-231	ENST00000599082	TRAIP	Q9BWF2	469 aa		11.98	□□□□□ -0.49
SOX2-OT-231	ENST00000599082	DNAAF2	Q9NVR5	837 aa	Known RBP	11.98	□□□□□ -0.49
SOX2-OT-231	ENST00000599082	UST	Q9Y2C2	406 aa		11.98	□□□□□ -0.49
SOX2-OT-231	ENST00000599082	PCDHGA11	Q9Y5H2	935 aa		11.98	□□□□□ -0.49
SOX2-OT-231	ENST00000599082	MYC	P01106	439 aa	Predicted RBP	11.97	□□□□□ -0.49
SOX2-OT-231	ENST00000599082	CC2D2B	Q6DHV5	1058 aa		11.97	□□□□□ -0.49
SOX2-OT-231	ENST00000599082	ZNF784	Q8NCA9	323 aa	Predicted RBP	11.97	□□□□□ -0.49
SOX2-OT-231	ENST00000599082	CYLD	Q9NQC7	956 aa		11.97	□□□□□ -0.49
SOX2-OT-231	ENST00000599082	KIAA1024	Q9UPX6	916 aa		11.97	□□□□□ -0.49
SOX2-OT-231	ENST00000599082	WASF2	Q9Y6W5	498 aa		11.97	□□□□□ -0.49
SOX2-OT-231	ENST00000599082	TMEM88B	A6NKF7	163 aa		11.96	□□□□□ -0.49
SOX2-OT-231	ENST00000599082		J3QL48	77 aa		11.96	□□□□□ -0.49
SOX2-OT-231	ENST00000599082	NNT	Q13423	1086 aa		11.96	□□□□□ -0.49
SOX2-OT-231	ENST00000599082	CYP4X1	Q8N118	509 aa		11.96	□□□□□ -0.49
SOX2-OT-231	ENST00000599082	LARGE2	Q8N3Y3	721 aa		11.96	□□□□□ -0.49
SOX2-OT-231	ENST00000599082	STK32A	Q8WU08	396 aa		11.96	□□□□□ -0.49
SOX2-OT-231	ENST00000599082	ZNF594	Q96JF6	807 aa	Predicted RBP	11.96	□□□□□ -0.49
SOX2-OT-231	ENST00000599082	TOR4A	Q9NXH8	423 aa		11.96	□□□□□ -0.49
SOX2-OT-231	ENST00000599082	TTC24	A2A3L6	582 aa	Predicted RBP	11.95	□□□□□ -0.5
SOX2-OT-231	ENST00000599082	CARNS1	A5YM72	827 aa		11.95	□□□□□ -0.5
SOX2-OT-231	ENST00000599082	LILRA1	O75019	489 aa		11.95	□□□□□ -0.5
SOX2-OT-231	ENST00000599082	DKK1	O94907	266 aa		11.95	□□□□□ -0.5
SOX2-OT-231	ENST00000599082	ANKMY2	Q8IV38	441 aa		11.95	□□□□□ -0.5
SOX2-OT-231	ENST00000599082	PRR20E	P86478	221 aa		11.94	□□□□□ -0.5
SOX2-OT-231	ENST00000599082	PRR20C	P86479	221 aa		11.94	□□□□□ -0.5
SOX2-OT-231	ENST00000599082	PRR20D	P86480	221 aa		11.94	□□□□□ -0.5
SOX2-OT-231	ENST00000599082	PRR20B	P86481	221 aa		11.94	□□□□□ -0.5
SOX2-OT-231	ENST00000599082	PRR20A	P86496	221 aa		11.94	□□□□□ -0.5
SOX2-OT-231	ENST00000599082	MYT1	Q01538	1121 aa		11.94	□□□□□ -0.5
SOX2-OT-231	ENST00000599082	PDE4C	Q08493	712 aa		11.94	□□□□□ -0.5
SOX2-OT-231	ENST00000599082	TMEM164	Q5U3C3	297 aa		11.94	□□□□□ -0.5
SOX2-OT-231	ENST00000599082	SIX5	Q8N196	739 aa		11.94	□□□□□ -0.5
SOX2-OT-231	ENST00000599082	OSBPL3	Q9H4L5	887 aa		11.94	□□□□□ -0.5
SOX2-OT-231	ENST00000599082	EMILIN1	Q9Y6C2	1016 aa		11.94	□□□□□ -0.5
SOX2-OT-231	ENST00000599082	DPYD	Q12882	1025 aa		11.93	□□□□□ -0.5
SOX2-OT-231	ENST00000599082	PKDCC	Q504Y2	493 aa		11.93	□□□□□ -0.5
SOX2-OT-231	ENST00000599082	TRIM52	Q96A61	297 aa		11.93	□□□□□ -0.5
SOX2-OT-231	ENST00000599082	PGPEP1	Q9NXJ5	209 aa		11.93	□□□□□ -0.5
SOX2-OT-231	ENST00000599082	SMPD1	P17405	629 aa		11.92	□□□□□ -0.5
SOX2-OT-231	ENST00000599082	CCDC102B	Q68D86	513 aa		11.92	□□□□□ -0.5
SOX2-OT-231	ENST00000599082	FAM200A	Q8TCP9	573 aa		11.92	□□□□□ -0.5
SOX2-OT-231	ENST00000599082	ESF1	Q9H501	851 aa	Known RBP	11.92	□□□□□ -0.5
SOX2-OT-231	ENST00000599082	POTEC	B2RU33	542 aa		11.91	□□□□□ -0.5
SOX2-OT-231	ENST00000599082	PSME1	Q06323	249 aa		11.91	□□□□□ -0.5
SOX2-OT-231	ENST00000599082	TPCN2	Q8NHX9	752 aa		11.91	□□□□□ -0.5
SOX2-OT-231	ENST00000599082	KLF16	Q9BXK1	252 aa	Predicted RBP	11.91	□□□□□ -0.5
SOX2-OT-231	ENST00000599082	DGAT1	O75907	488 aa		11.9	□□□□□ -0.5
SOX2-OT-231	ENST00000599082	ADD1	P35611	737 aa	Known RBP	11.9	□□□□□ -0.5
SOX2-OT-231	ENST00000599082	FAM69C	Q0P6D2	419 aa		11.88	□□□□□ -0.51
SOX2-OT-231	ENST00000599082	ITPKC	Q96DU7	683 aa		11.88	□□□□□ -0.51
SOX2-OT-231	ENST00000599082	SFI1	A8K8P3	1242 aa		11.87	□□□□□ -0.51
SOX2-OT-231	ENST00000599082	SEC13	P55735	322 aa		11.87	□□□□□ -0.51
SOX2-OT-231	ENST00000599082	ZIC2	O95409	532 aa	Predicted RBP	11.86	□□□□□ -0.51
SOX2-OT-231	ENST00000599082	WDR4	P57081	412 aa	Known RBP	11.86	□□□□□ -0.51
SOX2-OT-231	ENST00000599082	CYP2U1	Q7Z449	544 aa		11.86	□□□□□ -0.51
SOX2-OT-231	ENST00000599082	ZFAND3	Q9H8U3	227 aa		11.86	□□□□□ -0.51
SOX2-OT-231	ENST00000599082	RBM19	Q9Y4C8	960 aa	Known RBP	11.86	□□□□□ -0.51
SOX2-OT-231	ENST00000599082	TMEM229A	B2RXF0	380 aa		11.85	□□□□□ -0.51
SOX2-OT-231	ENST00000599082	STAU1	O95793	577 aa	Known RBP	11.85	□□□□□ -0.51
SOX2-OT-231	ENST00000599082	TIMP2	P16035	220 aa		11.85	□□□□□ -0.51
SOX2-OT-231	ENST00000599082	SCNN1D	P51172	638 aa		11.85	□□□□□ -0.51
SOX2-OT-231	ENST00000599082	CBLB	Q13191	982 aa		11.85	□□□□□ -0.51
SOX2-OT-231	ENST00000599082	SERBP1	Q8NC51	408 aa	Known RBP eCLIP	11.85	□□□□□ -0.51
SOX2-OT-231	ENST00000599082	HPS1	Q92902	700 aa		11.85	□□□□□ -0.51
SOX2-OT-231	ENST00000599082		Q6ZVU0	165 aa		11.84	□□□□□ -0.51
SOX2-OT-231	ENST00000599082	SLAIN2	Q9P270	581 aa		11.84	□□□□□ -0.51
SOX2-OT-231	ENST00000599082	GNRH1	P01148	92 aa		11.83	□□□□□ -0.52
SOX2-OT-231	ENST00000599082	ADH1A	P07327	375 aa		11.83	□□□□□ -0.52
SOX2-OT-231	ENST00000599082	GDF10	P55107	478 aa		11.83	□□□□□ -0.52
SOX2-OT-231	ENST00000599082	SWI5	Q1ZZU3	235 aa		11.83	□□□□□ -0.52
SOX2-OT-231	ENST00000599082	KDF1	Q8NAX2	398 aa	Predicted RBP	11.83	□□□□□ -0.52
SOX2-OT-231	ENST00000599082	ZNF358	Q9NW07	568 aa		11.83	□□□□□ -0.52
SOX2-OT-231	ENST00000599082	WASL	O00401	505 aa	Predicted RBP	11.82	□□□□□ -0.52
SOX2-OT-231	ENST00000599082	LCE2A	Q5TA79	106 aa	Predicted RBP	11.82	□□□□□ -0.52
SOX2-OT-231	ENST00000599082	CLP1	Q92989	425 aa	Known RBP	11.82	□□□□□ -0.52
SOX2-OT-231	ENST00000599082	ETNK1	Q9HBU6	452 aa		11.82	□□□□□ -0.52
SOX2-OT-231	ENST00000599082		M0R2N6	131 aa		11.81	□□□□□ -0.52
SOX2-OT-231	ENST00000599082	BRD1	O95696	1058 aa		11.8	□□□□□ -0.52
SOX2-OT-231	ENST00000599082	INHA	P05111	366 aa		11.8	□□□□□ -0.52
SOX2-OT-231	ENST00000599082	TREML4	Q6UXN2	200 aa		11.8	□□□□□ -0.52
SOX2-OT-231	ENST00000599082	KCTD17	Q8N5Z5	321 aa		11.8	□□□□□ -0.52
SOX2-OT-231	ENST00000599082	TSEN2	Q8NCE0	465 aa	Known RBP	11.8	□□□□□ -0.52
SOX2-OT-231	ENST00000599082	ARHGEF10L	Q9HCE6	1279 aa		11.8	□□□□□ -0.52
SOX2-OT-231	ENST00000599082	FAM187A	A6NFU0	413 aa		11.79	□□□□□ -0.52
SOX2-OT-231	ENST00000599082	TRIM26	Q12899	539 aa	Predicted RBP	11.79	□□□□□ -0.52
SOX2-OT-231	ENST00000599082	AEBP1	Q8IUX7	1158 aa		11.79	□□□□□ -0.52
SOX2-OT-231	ENST00000599082	AGBL1	Q96MI9	1066 aa		11.79	□□□□□ -0.52
SOX2-OT-231	ENST00000599082	RAB6B	Q9NRW1	208 aa		11.79	□□□□□ -0.52

Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms