RNA–Protein interactions for RNA: ENST00000598895.5

ZNF548-209, Transcript of zinc finger protein 548, humanhuman

TSL 4 BASIC

Gene ZNF548, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-209ENST00000598895 TATP17735 454 aaPredicted RBP16.38■□□□□ 0.21
ZNF548-209ENST00000598895 EYA1Q99502 592 aa16.38■□□□□ 0.21
ZNF548-209ENST00000598895 EZH2Q15910 746 aaKnown RBP16.37■□□□□ 0.21
ZNF548-209ENST00000598895 ZCRB1Q8TBF4 217 aaKnown RBP16.37■□□□□ 0.21
ZNF548-209ENST00000598895 MTHFSP49914 203 aa16.36■□□□□ 0.21
ZNF548-209ENST00000598895 NHSQ6T4R5 1651 aa16.35■□□□□ 0.21
ZNF548-209ENST00000598895 KCNQ2O43526 872 aa16.35■□□□□ 0.21
ZNF548-209ENST00000598895 GTF3C3Q9Y5Q9 886 aa16.35■□□□□ 0.21
ZNF548-209ENST00000598895 DOT1LQ8TEK3 1739 aa16.35■□□□□ 0.21
ZNF548-209ENST00000598895 NPC1L1Q9UHC9 1359 aa16.34■□□□□ 0.21
ZNF548-209ENST00000598895 BCL11BQ9C0K0 894 aaPredicted RBP16.33■□□□□ 0.2
ZNF548-209ENST00000598895 NCAPD2Q15021 1401 aa16.33■□□□□ 0.2
ZNF548-209ENST00000598895 PKD1L3Q7Z443 1732 aa16.33■□□□□ 0.2
ZNF548-209ENST00000598895 BCL9O00512 1426 aa16.32■□□□□ 0.2
ZNF548-209ENST00000598895 DDX10Q13206 875 aaKnown RBP16.32■□□□□ 0.2
ZNF548-209ENST00000598895 RREB1Q92766 1687 aa16.32■□□□□ 0.2
ZNF548-209ENST00000598895 CAMKK2Q96RR4 588 aa16.32■□□□□ 0.2
ZNF548-209ENST00000598895 KAT6BQ8WYB5 2073 aa16.31■□□□□ 0.2
ZNF548-209ENST00000598895 BTAF1O14981 1849 aa16.31■□□□□ 0.2
ZNF548-209ENST00000598895 IGSF1Q8N6C5 1336 aa16.31■□□□□ 0.2
ZNF548-209ENST00000598895 AEBP1Q8IUX7 1158 aa16.31■□□□□ 0.2
ZNF548-209ENST00000598895 SYTL4Q96C24 671 aaPredicted RBP16.31■□□□□ 0.2
ZNF548-209ENST00000598895 NUP188Q5SRE5 1749 aa16.31■□□□□ 0.2
ZNF548-209ENST00000598895 PCDH11XQ9BZA7 1347 aa16.3■□□□□ 0.2
ZNF548-209ENST00000598895 PCDH11YQ9BZA8 1340 aa16.3■□□□□ 0.2
ZNF548-209ENST00000598895 IL13P35225 146 aa16.3■□□□□ 0.2
ZNF548-209ENST00000598895 PSDA5PKW4 1024 aaPredicted RBP16.28■□□□□ 0.2
ZNF548-209ENST00000598895 CYP27B1O15528 508 aa16.28■□□□□ 0.2
ZNF548-209ENST00000598895 SULT6B1Q6IMI4 303 aa16.28■□□□□ 0.2
ZNF548-209ENST00000598895 SPG7Q9UQ90 795 aa16.28■□□□□ 0.2
ZNF548-209ENST00000598895 RGPD3A6NKT7 1758 aaPredicted RBP16.28■□□□□ 0.2
ZNF548-209ENST00000598895 RGPD4Q7Z3J3 1758 aa16.28■□□□□ 0.2
ZNF548-209ENST00000598895 DIAPH1O60610 1272 aaKnown RBP16.27■□□□□ 0.2
ZNF548-209ENST00000598895 HMOX1P09601 288 aa16.27■□□□□ 0.2
ZNF548-209ENST00000598895 PPP2R1AP30153 589 aa16.27■□□□□ 0.2
ZNF548-209ENST00000598895 PRIM1P49642 420 aaKnown RBP16.27■□□□□ 0.2
ZNF548-209ENST00000598895 TOGARAM1Q9Y4F4 1720 aa16.27■□□□□ 0.19
ZNF548-209ENST00000598895 COL3A1P02461 1466 aaPredicted RBP16.26■□□□□ 0.19
ZNF548-209ENST00000598895 PARD3Q8TEW0 1356 aa16.26■□□□□ 0.19
ZNF548-209ENST00000598895 U2SURPO15042 1029 aaKnown RBP16.25■□□□□ 0.19
ZNF548-209ENST00000598895 PLSCR1O15162 318 aa16.25■□□□□ 0.19
ZNF548-209ENST00000598895 R3HDM1Q15032 1099 aaKnown RBP16.24■□□□□ 0.19
ZNF548-209ENST00000598895 ITGB4P16144 1822 aa16.24■□□□□ 0.19
ZNF548-209ENST00000598895 PHKG2P15735 406 aa16.23■□□□□ 0.19
ZNF548-209ENST00000598895 TXNRD1Q16881 649 aa16.23■□□□□ 0.19
ZNF548-209ENST00000598895 MIER1Q8N108 512 aa16.23■□□□□ 0.19
ZNF548-209ENST00000598895 PROM2Q8N271 834 aa16.23■□□□□ 0.19
ZNF548-209ENST00000598895 PLEKHO1Q53GL0 409 aaPredicted RBP16.22■□□□□ 0.19
ZNF548-209ENST00000598895 MPRIPQ6WCQ1 1025 aa16.22■□□□□ 0.19
ZNF548-209ENST00000598895 IFNL2Q8IZJ0 200 aa16.22■□□□□ 0.19
ZNF548-209ENST00000598895 CFAP53Q96M91 514 aa16.22■□□□□ 0.19
ZNF548-209ENST00000598895 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.22■□□□□ 0.19
ZNF548-209ENST00000598895 ZNF530Q6P9A1 599 aaPredicted RBP16.21■□□□□ 0.19
ZNF548-209ENST00000598895 KDRP35968 1356 aa16.21■□□□□ 0.19
ZNF548-209ENST00000598895 KCNQ4P56696 695 aa16.2■□□□□ 0.18
ZNF548-209ENST00000598895 NBPF14Q5TI25 921 aa16.2■□□□□ 0.18
ZNF548-209ENST00000598895 AMOTQ4VCS5 1084 aa16.19■□□□□ 0.18
ZNF548-209ENST00000598895 ANO8Q9HCE9 1232 aaPredicted RBP16.19■□□□□ 0.18
ZNF548-209ENST00000598895 NKX1-1Q15270 411 aaPredicted RBP16.18■□□□□ 0.18
ZNF548-209ENST00000598895 LY75O60449 1722 aa16.18■□□□□ 0.18
ZNF548-209ENST00000598895 C1orf141Q5JVX7 400 aa16.17■□□□□ 0.18
ZNF548-209ENST00000598895 PLEKHG2Q9H7P9 1386 aa16.16■□□□□ 0.18
ZNF548-209ENST00000598895 PIGBQ92521 554 aa16.16■□□□□ 0.18
ZNF548-209ENST00000598895 LRRC4BQ9NT99 713 aa16.16■□□□□ 0.18
ZNF548-209ENST00000598895 KDM6AO15550 1401 aaPredicted RBP16.16■□□□□ 0.18
ZNF548-209ENST00000598895 VIRMAQ69YN4 1812 aaKnown RBP16.15■□□□□ 0.18
ZNF548-209ENST00000598895 U2AF1L5P0DN76 240 aaPredicted RBP16.15■□□□□ 0.18
ZNF548-209ENST00000598895 U2AF1Q01081 240 aaKnown RBP eCLIP16.15■□□□□ 0.18
ZNF548-209ENST00000598895 MTHFSDQ2M296 383 aaKnown RBP16.15■□□□□ 0.18
ZNF548-209ENST00000598895 TMOD3Q9NYL9 352 aa16.15■□□□□ 0.18
ZNF548-209ENST00000598895 NUDCQ9Y266 331 aa16.15■□□□□ 0.18
ZNF548-209ENST00000598895 PAPPAQ13219 1627 aa16.15■□□□□ 0.18
ZNF548-209ENST00000598895 YTHDC1Q96MU7 727 aaKnown RBP16.14■□□□□ 0.17
ZNF548-209ENST00000598895 STK32BQ9NY57 414 aa16.14■□□□□ 0.17
ZNF548-209ENST00000598895 PALLDQ8WX93 1383 aa16.13■□□□□ 0.17
ZNF548-209ENST00000598895 SCN11AQ9UI33 1791 aa16.13■□□□□ 0.17
ZNF548-209ENST00000598895 HSP90AB1P08238 724 aaKnown RBP16.13■□□□□ 0.17
ZNF548-209ENST00000598895 PRKAR2BP31323 418 aa16.13■□□□□ 0.17
ZNF548-209ENST00000598895 RALBP1Q15311 655 aa16.13■□□□□ 0.17
ZNF548-209ENST00000598895 DCAF5Q96JK2 942 aa16.13■□□□□ 0.17
ZNF548-209ENST00000598895 CCNL1Q9UK58 526 aaPredicted RBP16.13■□□□□ 0.17
ZNF548-209ENST00000598895 CABP4P57796 275 aa16.12■□□□□ 0.17
ZNF548-209ENST00000598895 C5P01031 1676 aa16.11■□□□□ 0.17
ZNF548-209ENST00000598895 SLC15A2Q16348 729 aa16.11■□□□□ 0.17
ZNF548-209ENST00000598895 ZNF827Q17R98 1081 aa16.11■□□□□ 0.17
ZNF548-209ENST00000598895 AKAP4Q5JQC9 854 aa16.11■□□□□ 0.17
ZNF548-209ENST00000598895 SLC27A3Q5K4L6 730 aa16.11■□□□□ 0.17
ZNF548-209ENST00000598895 PDGFDQ9GZP0 370 aaPredicted RBP16.11■□□□□ 0.17
ZNF548-209ENST00000598895 RSPH6AQ9H0K4 717 aa16.11■□□□□ 0.17
ZNF548-209ENST00000598895 ASAP1Q9ULH1 1129 aa16.11■□□□□ 0.17
ZNF548-209ENST00000598895 PHACTR3Q96KR7 559 aa16.1■□□□□ 0.17
ZNF548-209ENST00000598895 LGR6Q9HBX8 967 aa16.1■□□□□ 0.17
ZNF548-209ENST00000598895 MYBBP1AQ9BQG0 1328 aaKnown RBP16.1■□□□□ 0.17
ZNF548-209ENST00000598895 CASZ1Q86V15 1759 aa16.09■□□□□ 0.17
ZNF548-209ENST00000598895 ERVV-2B6SEH9 535 aa16.09■□□□□ 0.17
ZNF548-209ENST00000598895 NFATC2IPQ8NCF5 419 aa16.09■□□□□ 0.17
ZNF548-209ENST00000598895 SMARCC1Q92922 1105 aaPredicted RBP16.09■□□□□ 0.17
ZNF548-209ENST00000598895 ATG3Q9NT62 314 aa16.09■□□□□ 0.17
ZNF548-209ENST00000598895 TAF1LQ8IZX4 1826 aa16.09■□□□□ 0.17
ZNF548-209ENST00000598895 TUBGCP6Q96RT7 1819 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms