RNA–Protein interactions for RNA: ENST00000598886.1

SMG9-208, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 681 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-208ENST00000598886 AMPHP49418 695 aa21.96■■□□□ 1.11
SMG9-208ENST00000598886 NBPF6Q5VWK0 638 aa21.96■■□□□ 1.11
SMG9-208ENST00000598886 NBPF4Q96M43 638 aa21.96■■□□□ 1.11
SMG9-208ENST00000598886 CLSPNQ9HAW4 1339 aa21.96■■□□□ 1.11
SMG9-208ENST00000598886 INSRP06213 1382 aa21.96■■□□□ 1.11
SMG9-208ENST00000598886 KIF24Q5T7B8 1368 aa21.96■■□□□ 1.11
SMG9-208ENST00000598886 NSD3Q9BZ95 1437 aa21.96■■□□□ 1.11
SMG9-208ENST00000598886 MAP2P11137 1827 aaKnown RBP21.95■■□□□ 1.1
SMG9-208ENST00000598886 ZNF827Q17R98 1081 aa21.95■■□□□ 1.1
SMG9-208ENST00000598886 ITGB4P16144 1822 aa21.93■■□□□ 1.1
SMG9-208ENST00000598886 FLT4P35916 1363 aa21.93■■□□□ 1.1
SMG9-208ENST00000598886 DDX54Q8TDD1 881 aaKnown RBP21.93■■□□□ 1.1
SMG9-208ENST00000598886 TAF1LQ8IZX4 1826 aa21.92■■□□□ 1.1
SMG9-208ENST00000598886 CDCA8Q53HL2 280 aa21.92■■□□□ 1.1
SMG9-208ENST00000598886 AKT1S1Q96B36 256 aa21.92■■□□□ 1.1
SMG9-208ENST00000598886 PPP1R1BQ9UD71 204 aaPredicted RBP21.92■■□□□ 1.1
SMG9-208ENST00000598886 HSP90AB2PQ58FF8 381 aa21.91■■□□□ 1.1
SMG9-208ENST00000598886 ZCRB1Q8TBF4 217 aaKnown RBP21.91■■□□□ 1.1
SMG9-208ENST00000598886 C5P01031 1676 aa21.91■■□□□ 1.1
SMG9-208ENST00000598886 SMG6Q86US8 1419 aaKnown RBP21.9■■□□□ 1.1
SMG9-208ENST00000598886 USHBP1Q8N6Y0 703 aa21.9■■□□□ 1.1
SMG9-208ENST00000598886 MTFR1LQ9H019 292 aa21.9■■□□□ 1.1
SMG9-208ENST00000598886 CGNL1Q0VF96 1302 aa21.89■■□□□ 1.1
SMG9-208ENST00000598886 ATF5Q9Y2D1 282 aaPredicted RBP21.89■■□□□ 1.09
SMG9-208ENST00000598886 PRIM1P49642 420 aaKnown RBP21.88■■□□□ 1.09
SMG9-208ENST00000598886 SLC27A3Q5K4L6 730 aa21.88■■□□□ 1.09
SMG9-208ENST00000598886 UTRNP46939 3433 aa21.87■■□□□ 1.09
SMG9-208ENST00000598886 EMILIN1Q9Y6C2 1016 aa21.86■■□□□ 1.09
SMG9-208ENST00000598886 MAP3K5Q99683 1374 aa21.86■■□□□ 1.09
SMG9-208ENST00000598886 PNPLA7Q6ZV29 1317 aa21.84■■□□□ 1.09
SMG9-208ENST00000598886 KCNQ4P56696 695 aa21.83■■□□□ 1.09
SMG9-208ENST00000598886 FHDC1Q9C0D6 1143 aaPredicted RBP21.83■■□□□ 1.09
SMG9-208ENST00000598886 RAPGEF4Q8WZA2 1011 aa21.81■■□□□ 1.08
SMG9-208ENST00000598886 SYTL4Q96C24 671 aaPredicted RBP21.81■■□□□ 1.08
SMG9-208ENST00000598886 SYT17Q9BSW7 474 aa21.81■■□□□ 1.08
SMG9-208ENST00000598886 PCDH11XQ9BZA7 1347 aa21.8■■□□□ 1.08
SMG9-208ENST00000598886 PCDH11YQ9BZA8 1340 aa21.8■■□□□ 1.08
SMG9-208ENST00000598886 CHD4Q14839 1912 aa21.8■■□□□ 1.08
SMG9-208ENST00000598886 CYP27B1O15528 508 aa21.8■■□□□ 1.08
SMG9-208ENST00000598886 TATP17735 454 aaPredicted RBP21.8■■□□□ 1.08
SMG9-208ENST00000598886 WASHC2AQ641Q2 1341 aa21.8■■□□□ 1.08
SMG9-208ENST00000598886 PCGF6Q9BYE7 350 aa21.79■■□□□ 1.08
SMG9-208ENST00000598886 UBR3Q6ZT12 1888 aa21.79■■□□□ 1.08
SMG9-208ENST00000598886 C4BP0C0L5 1744 aa21.78■■□□□ 1.08
SMG9-208ENST00000598886 YY1P25490 414 aa21.78■■□□□ 1.08
SMG9-208ENST00000598886 ARXQ96QS3 562 aa21.78■■□□□ 1.08
SMG9-208ENST00000598886 SLC16A10Q8TF71 515 aa21.77■■□□□ 1.08
SMG9-208ENST00000598886 POLKQ9UBT6 870 aa21.76■■□□□ 1.07
SMG9-208ENST00000598886 CCNL1Q9UK58 526 aaPredicted RBP21.75■■□□□ 1.07
SMG9-208ENST00000598886 NKX1-1Q15270 411 aaPredicted RBP21.74■■□□□ 1.07
SMG9-208ENST00000598886 HSPA5P11021 654 aaKnown RBP21.73■■□□□ 1.07
SMG9-208ENST00000598886 EYA1Q99502 592 aa21.73■■□□□ 1.07
SMG9-208ENST00000598886 PALLDQ8WX93 1383 aa21.73■■□□□ 1.07
SMG9-208ENST00000598886 TFCP2L1Q9NZI6 479 aa21.72■■□□□ 1.07
SMG9-208ENST00000598886 PLEKHG2Q9H7P9 1386 aa21.72■■□□□ 1.07
SMG9-208ENST00000598886 GOLGB1Q14789 3259 aaKnown RBP21.71■■□□□ 1.07
SMG9-208ENST00000598886 ZNF831Q5JPB2 1677 aa21.71■■□□□ 1.07
SMG9-208ENST00000598886 PPM1GO15355 546 aaPredicted RBP21.69■■□□□ 1.06
SMG9-208ENST00000598886 EIF4G2P78344 907 aaKnown RBP eCLIP21.69■■□□□ 1.06
SMG9-208ENST00000598886 COL23A1Q86Y22 540 aaPredicted RBP21.69■■□□□ 1.06
SMG9-208ENST00000598886 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.69■■□□□ 1.06
SMG9-208ENST00000598886 DCAF8L1A6NGE4 600 aa21.68■■□□□ 1.06
SMG9-208ENST00000598886 EIF4A2Q14240 407 aaKnown RBP21.68■■□□□ 1.06
SMG9-208ENST00000598886 COL5A3P25940 1745 aaPredicted RBP21.67■■□□□ 1.06
SMG9-208ENST00000598886 IGSF1Q8N6C5 1336 aa21.67■■□□□ 1.06
SMG9-208ENST00000598886 MPRIPQ6WCQ1 1025 aa21.67■■□□□ 1.06
SMG9-208ENST00000598886 AMIGO3Q86WK7 504 aa21.67■■□□□ 1.06
SMG9-208ENST00000598886 PIGBQ92521 554 aa21.67■■□□□ 1.06
SMG9-208ENST00000598886 PANK3Q9H999 370 aa21.66■■□□□ 1.06
SMG9-208ENST00000598886 SPG7Q9UQ90 795 aa21.65■■□□□ 1.06
SMG9-208ENST00000598886 PHKG2P15735 406 aa21.64■■□□□ 1.05
SMG9-208ENST00000598886 POLD1P28340 1107 aa21.63■■□□□ 1.05
SMG9-208ENST00000598886 TNNT2P45379 298 aaPredicted RBP21.63■■□□□ 1.05
SMG9-208ENST00000598886 NLGN2Q8NFZ4 835 aa21.63■■□□□ 1.05
SMG9-208ENST00000598886 POLR3GLQ9BT43 218 aa21.63■■□□□ 1.05
SMG9-208ENST00000598886 KDRP35968 1356 aa21.62■■□□□ 1.05
SMG9-208ENST00000598886 SMARCC1Q92922 1105 aaPredicted RBP21.62■■□□□ 1.05
SMG9-208ENST00000598886 CICQ96RK0 1608 aaPredicted RBP21.62■■□□□ 1.05
SMG9-208ENST00000598886 KDM6AO15550 1401 aaPredicted RBP21.61■■□□□ 1.05
SMG9-208ENST00000598886 CCER1Q8TC90 406 aaPredicted RBP21.6■■□□□ 1.05
SMG9-208ENST00000598886 VIRMAQ69YN4 1812 aaKnown RBP21.59■■□□□ 1.05
SMG9-208ENST00000598886 SCN11AQ9UI33 1791 aa21.59■■□□□ 1.05
SMG9-208ENST00000598886 IFNL2Q8IZJ0 200 aa21.59■■□□□ 1.05
SMG9-208ENST00000598886 ZNF784Q8NCA9 323 aaPredicted RBP21.59■■□□□ 1.05
SMG9-208ENST00000598886 KIAA1551Q9HCM1 1747 aa21.58■■□□□ 1.05
SMG9-208ENST00000598886 MSL1Q68DK7 614 aa21.58■■□□□ 1.05
SMG9-208ENST00000598886 LINC00116Q8NCU8 138 aa21.58■■□□□ 1.05
SMG9-208ENST00000598886 ASAP1Q9ULH1 1129 aa21.58■■□□□ 1.05
SMG9-208ENST00000598886 C4AP0C0L4 1744 aa21.58■■□□□ 1.04
SMG9-208ENST00000598886 KIF13BQ9NQT8 1826 aa21.57■■□□□ 1.04
SMG9-208ENST00000598886 LOC102724428A0A0B4J2F2 783 aa21.57■■□□□ 1.04
SMG9-208ENST00000598886 SIK1P57059 783 aa21.57■■□□□ 1.04
SMG9-208ENST00000598886 ITPK1Q13572 414 aa21.57■■□□□ 1.04
SMG9-208ENST00000598886 TJP1Q07157 1748 aa21.56■■□□□ 1.04
SMG9-208ENST00000598886 SMIM5Q71RC9 77 aa21.56■■□□□ 1.04
SMG9-208ENST00000598886 FLAD1Q8NFF5 587 aa21.56■■□□□ 1.04
SMG9-208ENST00000598886 TMOD3Q9NYL9 352 aa21.56■■□□□ 1.04
SMG9-208ENST00000598886 ATG3Q9NT62 314 aa21.55■■□□□ 1.04
SMG9-208ENST00000598886 MYH14Q7Z406 1995 aaKnown RBP21.55■■□□□ 1.04
SMG9-208ENST00000598886 KIF7Q2M1P5 1343 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms