RNA–Protein interactions for RNA: ENST00000598422.1

XRCC1-208, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 2

Gene XRCC1, Length 701 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-208ENST00000598422 NHSQ6T4R5 1651 aa19.99■□□□□ 0.79
XRCC1-208ENST00000598422 SRCAPQ6ZRS2 3230 aa19.99■□□□□ 0.79
XRCC1-208ENST00000598422 PCDH11XQ9BZA7 1347 aa19.99■□□□□ 0.79
XRCC1-208ENST00000598422 PCDH11YQ9BZA8 1340 aa19.99■□□□□ 0.79
XRCC1-208ENST00000598422 NUP188Q5SRE5 1749 aa19.99■□□□□ 0.79
XRCC1-208ENST00000598422 RGPD3A6NKT7 1758 aaPredicted RBP19.98■□□□□ 0.79
XRCC1-208ENST00000598422 RGPD4Q7Z3J3 1758 aa19.98■□□□□ 0.79
XRCC1-208ENST00000598422 SBF2Q86WG5 1849 aa19.97■□□□□ 0.79
XRCC1-208ENST00000598422 PRIM1P49642 420 aaKnown RBP19.96■□□□□ 0.79
XRCC1-208ENST00000598422 PROM2Q8N271 834 aa19.96■□□□□ 0.79
XRCC1-208ENST00000598422 ANO8Q9HCE9 1232 aaPredicted RBP19.96■□□□□ 0.79
XRCC1-208ENST00000598422 EIF4A2Q14240 407 aaKnown RBP19.95■□□□□ 0.78
XRCC1-208ENST00000598422 EYA1Q99502 592 aa19.95■□□□□ 0.78
XRCC1-208ENST00000598422 STK32BQ9NY57 414 aa19.95■□□□□ 0.78
XRCC1-208ENST00000598422 ANKRD26Q9UPS8 1709 aa19.95■□□□□ 0.78
XRCC1-208ENST00000598422 LRP5O75197 1615 aa19.94■□□□□ 0.78
XRCC1-208ENST00000598422 AMER1Q5JTC6 1135 aaPredicted RBP19.93■□□□□ 0.78
XRCC1-208ENST00000598422 SPG7Q9UQ90 795 aa19.93■□□□□ 0.78
XRCC1-208ENST00000598422 RGPD2P0DJD1 1756 aa19.93■□□□□ 0.78
XRCC1-208ENST00000598422 NCAPD2Q15021 1401 aa19.93■□□□□ 0.78
XRCC1-208ENST00000598422 SLC15A2Q16348 729 aa19.89■□□□□ 0.77
XRCC1-208ENST00000598422 SLC27A3Q5K4L6 730 aa19.89■□□□□ 0.77
XRCC1-208ENST00000598422 SPON1Q9HCB6 807 aa19.89■□□□□ 0.77
XRCC1-208ENST00000598422 IGSF1Q8N6C5 1336 aa19.88■□□□□ 0.77
XRCC1-208ENST00000598422 CYP27B1O15528 508 aa19.88■□□□□ 0.77
XRCC1-208ENST00000598422 CC2D1BQ5T0F9 858 aaKnown RBP19.88■□□□□ 0.77
XRCC1-208ENST00000598422 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.87■□□□□ 0.77
XRCC1-208ENST00000598422 BTAF1O14981 1849 aa19.87■□□□□ 0.77
XRCC1-208ENST00000598422 DOT1LQ8TEK3 1739 aa19.87■□□□□ 0.77
XRCC1-208ENST00000598422 SHANK3Q9BYB0 1731 aa19.86■□□□□ 0.77
XRCC1-208ENST00000598422 PPP1R1BQ9UD71 204 aaPredicted RBP19.86■□□□□ 0.77
XRCC1-208ENST00000598422 PLEKHG2Q9H7P9 1386 aa19.85■□□□□ 0.77
XRCC1-208ENST00000598422 PER1O15534 1290 aaPredicted RBP19.85■□□□□ 0.77
XRCC1-208ENST00000598422 CNGB1Q14028 1251 aaPredicted RBP19.85■□□□□ 0.77
XRCC1-208ENST00000598422 LRRC4BQ9NT99 713 aa19.85■□□□□ 0.77
XRCC1-208ENST00000598422 MAP2P11137 1827 aaKnown RBP19.85■□□□□ 0.77
XRCC1-208ENST00000598422 MPRIPQ6WCQ1 1025 aa19.84■□□□□ 0.77
XRCC1-208ENST00000598422 CCNL1Q9UK58 526 aaPredicted RBP19.84■□□□□ 0.77
XRCC1-208ENST00000598422 ZBTB7AO95365 584 aa19.83■□□□□ 0.77
XRCC1-208ENST00000598422 MTHFSP49914 203 aa19.83■□□□□ 0.77
XRCC1-208ENST00000598422 IFNL2Q8IZJ0 200 aa19.83■□□□□ 0.77
XRCC1-208ENST00000598422 PHKG2P15735 406 aa19.82■□□□□ 0.76
XRCC1-208ENST00000598422 ZNF827Q17R98 1081 aa19.82■□□□□ 0.76
XRCC1-208ENST00000598422 PKD1L3Q7Z443 1732 aa19.82■□□□□ 0.76
XRCC1-208ENST00000598422 NPC1L1Q9UHC9 1359 aa19.82■□□□□ 0.76
XRCC1-208ENST00000598422 KCNQ4P56696 695 aa19.81■□□□□ 0.76
XRCC1-208ENST00000598422 NKX1-1Q15270 411 aaPredicted RBP19.81■□□□□ 0.76
XRCC1-208ENST00000598422 PLEKHO1Q53GL0 409 aaPredicted RBP19.81■□□□□ 0.76
XRCC1-208ENST00000598422 PDGFDQ9GZP0 370 aaPredicted RBP19.81■□□□□ 0.76
XRCC1-208ENST00000598422 PALLDQ8WX93 1383 aa19.81■□□□□ 0.76
XRCC1-208ENST00000598422 SULT6B1Q6IMI4 303 aa19.8■□□□□ 0.76
XRCC1-208ENST00000598422 AEBP1Q8IUX7 1158 aa19.8■□□□□ 0.76
XRCC1-208ENST00000598422 SMARCC1Q92922 1105 aaPredicted RBP19.8■□□□□ 0.76
XRCC1-208ENST00000598422 PAPPAQ13219 1627 aa19.8■□□□□ 0.76
XRCC1-208ENST00000598422 HSP90AB1P08238 724 aaKnown RBP19.79■□□□□ 0.76
XRCC1-208ENST00000598422 IL13P35225 146 aa19.79■□□□□ 0.76
XRCC1-208ENST00000598422 AMOTQ4VCS5 1084 aa19.79■□□□□ 0.76
XRCC1-208ENST00000598422 TMOD3Q9NYL9 352 aa19.79■□□□□ 0.76
XRCC1-208ENST00000598422 TFCP2L1Q9NZI6 479 aa19.79■□□□□ 0.76
XRCC1-208ENST00000598422 HMGB2P26583 209 aaKnown RBP19.78■□□□□ 0.76
XRCC1-208ENST00000598422 ZNF530Q6P9A1 599 aaPredicted RBP19.78■□□□□ 0.76
XRCC1-208ENST00000598422 AKT1S1Q96B36 256 aa19.78■□□□□ 0.76
XRCC1-208ENST00000598422 MTFR1LQ9H019 292 aa19.78■□□□□ 0.76
XRCC1-208ENST00000598422 PIGBQ92521 554 aa19.77■□□□□ 0.76
XRCC1-208ENST00000598422 ATF5Q9Y2D1 282 aaPredicted RBP19.77■□□□□ 0.76
XRCC1-208ENST00000598422 KAT6BQ8WYB5 2073 aa19.77■□□□□ 0.75
XRCC1-208ENST00000598422 CASZ1Q86V15 1759 aa19.76■□□□□ 0.75
XRCC1-208ENST00000598422 C1orf141Q5JVX7 400 aa19.76■□□□□ 0.75
XRCC1-208ENST00000598422 KDRP35968 1356 aa19.75■□□□□ 0.75
XRCC1-208ENST00000598422 DIAPH1O60610 1272 aaKnown RBP19.75■□□□□ 0.75
XRCC1-208ENST00000598422 DCAF5Q96JK2 942 aa19.74■□□□□ 0.75
XRCC1-208ENST00000598422 TOGARAM1Q9Y4F4 1720 aa19.73■□□□□ 0.75
XRCC1-208ENST00000598422 MSH5O43196 834 aa19.72■□□□□ 0.75
XRCC1-208ENST00000598422 PNPLA7Q6ZV29 1317 aa19.72■□□□□ 0.75
XRCC1-208ENST00000598422 ERVV-2B6SEH9 535 aa19.71■□□□□ 0.75
XRCC1-208ENST00000598422 HMOX1P09601 288 aa19.71■□□□□ 0.75
XRCC1-208ENST00000598422 PTGER2P43116 358 aa19.71■□□□□ 0.75
XRCC1-208ENST00000598422 SLC16A10Q8TF71 515 aa19.71■□□□□ 0.75
XRCC1-208ENST00000598422 LY75O60449 1722 aa19.71■□□□□ 0.75
XRCC1-208ENST00000598422 CABP4P57796 275 aa19.7■□□□□ 0.74
XRCC1-208ENST00000598422 AK7Q96M32 723 aa19.7■□□□□ 0.74
XRCC1-208ENST00000598422 CFAP53Q96M91 514 aa19.7■□□□□ 0.74
XRCC1-208ENST00000598422 LOC102724428A0A0B4J2F2 783 aa19.69■□□□□ 0.74
XRCC1-208ENST00000598422 U2SURPO15042 1029 aaKnown RBP19.69■□□□□ 0.74
XRCC1-208ENST00000598422 SIK1P57059 783 aa19.69■□□□□ 0.74
XRCC1-208ENST00000598422 ASAP1Q9ULH1 1129 aa19.69■□□□□ 0.74
XRCC1-208ENST00000598422 KDM6AO15550 1401 aaPredicted RBP19.68■□□□□ 0.74
XRCC1-208ENST00000598422 POLD1P28340 1107 aa19.68■□□□□ 0.74
XRCC1-208ENST00000598422 DCAF8L1A6NGE4 600 aa19.67■□□□□ 0.74
XRCC1-208ENST00000598422 ATG3Q9NT62 314 aa19.67■□□□□ 0.74
XRCC1-208ENST00000598422 AKAP4Q5JQC9 854 aa19.66■□□□□ 0.74
XRCC1-208ENST00000598422 FLAD1Q8NFF5 587 aa19.66■□□□□ 0.74
XRCC1-208ENST00000598422 ARXQ96QS3 562 aa19.66■□□□□ 0.74
XRCC1-208ENST00000598422 COL3A1P02461 1466 aaPredicted RBP19.66■□□□□ 0.74
XRCC1-208ENST00000598422 ATP6V1AP38606 617 aa19.65■□□□□ 0.74
XRCC1-208ENST00000598422 SGIP1Q9BQI5 828 aa19.65■□□□□ 0.74
XRCC1-208ENST00000598422 COL23A1Q86Y22 540 aaPredicted RBP19.64■□□□□ 0.73
XRCC1-208ENST00000598422 FHDC1Q9C0D6 1143 aaPredicted RBP19.64■□□□□ 0.73
XRCC1-208ENST00000598422 RBM42Q9BTD8 480 aaKnown RBP19.63■□□□□ 0.73
XRCC1-208ENST00000598422 NUDCQ9Y266 331 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms