RNA–Protein interactions for RNA: ENST00000598352.1

C19orf54-208, Transcript of chromosome 19 open reading frame 54, humanhuman

TSL 1 (best)

Gene C19orf54, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf54-208ENST00000598352 DDX54Q8TDD1 881 aaKnown RBP16.99■□□□□ 0.31
C19orf54-208ENST00000598352 SRCAPQ6ZRS2 3230 aa16.98■□□□□ 0.31
C19orf54-208ENST00000598352 PROM2Q8N271 834 aa16.98■□□□□ 0.31
C19orf54-208ENST00000598352 RAPGEF4Q8WZA2 1011 aa16.98■□□□□ 0.31
C19orf54-208ENST00000598352 TATP17735 454 aaPredicted RBP16.97■□□□□ 0.31
C19orf54-208ENST00000598352 ACSBG1Q96GR2 724 aa16.97■□□□□ 0.31
C19orf54-208ENST00000598352 CC2D1BQ5T0F9 858 aaKnown RBP16.96■□□□□ 0.31
C19orf54-208ENST00000598352 IGSF1Q8N6C5 1336 aa16.96■□□□□ 0.3
C19orf54-208ENST00000598352 CYP27B1O15528 508 aa16.95■□□□□ 0.3
C19orf54-208ENST00000598352 SHANK3Q9BYB0 1731 aa16.95■□□□□ 0.3
C19orf54-208ENST00000598352 IL13P35225 146 aa16.93■□□□□ 0.3
C19orf54-208ENST00000598352 MTHFSP49914 203 aa16.93■□□□□ 0.3
C19orf54-208ENST00000598352 NHSQ6T4R5 1651 aa16.93■□□□□ 0.3
C19orf54-208ENST00000598352 RREB1Q92766 1687 aa16.92■□□□□ 0.3
C19orf54-208ENST00000598352 PSDA5PKW4 1024 aaPredicted RBP16.92■□□□□ 0.3
C19orf54-208ENST00000598352 PRIM1P49642 420 aaKnown RBP16.92■□□□□ 0.3
C19orf54-208ENST00000598352 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.92■□□□□ 0.3
C19orf54-208ENST00000598352 PCDH11XQ9BZA7 1347 aa16.91■□□□□ 0.3
C19orf54-208ENST00000598352 PCDH11YQ9BZA8 1340 aa16.91■□□□□ 0.3
C19orf54-208ENST00000598352 RGPD3A6NKT7 1758 aaPredicted RBP16.9■□□□□ 0.3
C19orf54-208ENST00000598352 RGPD4Q7Z3J3 1758 aa16.9■□□□□ 0.3
C19orf54-208ENST00000598352 R3HDM1Q15032 1099 aaKnown RBP16.9■□□□□ 0.3
C19orf54-208ENST00000598352 NKX1-1Q15270 411 aaPredicted RBP16.9■□□□□ 0.3
C19orf54-208ENST00000598352 TXNRD1Q16881 649 aa16.9■□□□□ 0.3
C19orf54-208ENST00000598352 NUP188Q5SRE5 1749 aa16.9■□□□□ 0.3
C19orf54-208ENST00000598352 AEBP1Q8IUX7 1158 aa16.89■□□□□ 0.29
C19orf54-208ENST00000598352 ANO8Q9HCE9 1232 aaPredicted RBP16.89■□□□□ 0.29
C19orf54-208ENST00000598352 PLEKHG2Q9H7P9 1386 aa16.89■□□□□ 0.29
C19orf54-208ENST00000598352 KAT6BQ8WYB5 2073 aa16.89■□□□□ 0.29
C19orf54-208ENST00000598352 PKD1L3Q7Z443 1732 aa16.88■□□□□ 0.29
C19orf54-208ENST00000598352 SPG7Q9UQ90 795 aa16.88■□□□□ 0.29
C19orf54-208ENST00000598352 CNGB1Q14028 1251 aaPredicted RBP16.87■□□□□ 0.29
C19orf54-208ENST00000598352 KDRP35968 1356 aa16.87■□□□□ 0.29
C19orf54-208ENST00000598352 BTAF1O14981 1849 aa16.86■□□□□ 0.29
C19orf54-208ENST00000598352 NBPF14Q5TI25 921 aa16.86■□□□□ 0.29
C19orf54-208ENST00000598352 LRRC4BQ9NT99 713 aa16.86■□□□□ 0.29
C19orf54-208ENST00000598352 PHKG2P15735 406 aa16.85■□□□□ 0.29
C19orf54-208ENST00000598352 SULT6B1Q6IMI4 303 aa16.85■□□□□ 0.29
C19orf54-208ENST00000598352 SYTL4Q96C24 671 aaPredicted RBP16.85■□□□□ 0.29
C19orf54-208ENST00000598352 COL3A1P02461 1466 aaPredicted RBP16.85■□□□□ 0.29
C19orf54-208ENST00000598352 DOT1LQ8TEK3 1739 aa16.84■□□□□ 0.29
C19orf54-208ENST00000598352 DIAPH1O60610 1272 aaKnown RBP16.82■□□□□ 0.28
C19orf54-208ENST00000598352 PPP2R1AP30153 589 aa16.82■□□□□ 0.28
C19orf54-208ENST00000598352 PLEKHO1Q53GL0 409 aaPredicted RBP16.82■□□□□ 0.28
C19orf54-208ENST00000598352 IFNL2Q8IZJ0 200 aa16.82■□□□□ 0.28
C19orf54-208ENST00000598352 PIGBQ92521 554 aa16.82■□□□□ 0.28
C19orf54-208ENST00000598352 AMOTQ4VCS5 1084 aa16.81■□□□□ 0.28
C19orf54-208ENST00000598352 TOGARAM1Q9Y4F4 1720 aa16.81■□□□□ 0.28
C19orf54-208ENST00000598352 SLC27A3Q5K4L6 730 aa16.8■□□□□ 0.28
C19orf54-208ENST00000598352 ZNF530Q6P9A1 599 aaPredicted RBP16.8■□□□□ 0.28
C19orf54-208ENST00000598352 PAPPAQ13219 1627 aa16.79■□□□□ 0.28
C19orf54-208ENST00000598352 HMOX1P09601 288 aa16.79■□□□□ 0.28
C19orf54-208ENST00000598352 ZEB1P37275 1124 aaPredicted RBP16.79■□□□□ 0.28
C19orf54-208ENST00000598352 KCNQ4P56696 695 aa16.79■□□□□ 0.28
C19orf54-208ENST00000598352 SLC15A2Q16348 729 aa16.79■□□□□ 0.28
C19orf54-208ENST00000598352 MPRIPQ6WCQ1 1025 aa16.79■□□□□ 0.28
C19orf54-208ENST00000598352 PDGFDQ9GZP0 370 aaPredicted RBP16.79■□□□□ 0.28
C19orf54-208ENST00000598352 ZNF827Q17R98 1081 aa16.78■□□□□ 0.28
C19orf54-208ENST00000598352 AKT1S1Q96B36 256 aa16.78■□□□□ 0.28
C19orf54-208ENST00000598352 STK32BQ9NY57 414 aa16.78■□□□□ 0.28
C19orf54-208ENST00000598352 DDX10Q13206 875 aaKnown RBP16.77■□□□□ 0.28
C19orf54-208ENST00000598352 DCAF5Q96JK2 942 aa16.77■□□□□ 0.28
C19orf54-208ENST00000598352 KDM6AO15550 1401 aaPredicted RBP16.77■□□□□ 0.27
C19orf54-208ENST00000598352 HSP90AB1P08238 724 aaKnown RBP16.76■□□□□ 0.27
C19orf54-208ENST00000598352 PALLDQ8WX93 1383 aa16.76■□□□□ 0.27
C19orf54-208ENST00000598352 LRP5O75197 1615 aa16.75■□□□□ 0.27
C19orf54-208ENST00000598352 ERVV-2B6SEH9 535 aa16.75■□□□□ 0.27
C19orf54-208ENST00000598352 TMOD3Q9NYL9 352 aa16.75■□□□□ 0.27
C19orf54-208ENST00000598352 CCNL1Q9UK58 526 aaPredicted RBP16.75■□□□□ 0.27
C19orf54-208ENST00000598352 ASAP1Q9ULH1 1129 aa16.75■□□□□ 0.27
C19orf54-208ENST00000598352 LY75O60449 1722 aa16.75■□□□□ 0.27
C19orf54-208ENST00000598352 ITGB4P16144 1822 aa16.75■□□□□ 0.27
C19orf54-208ENST00000598352 SMARCC1Q92922 1105 aaPredicted RBP16.74■□□□□ 0.27
C19orf54-208ENST00000598352 CFAP53Q96M91 514 aa16.74■□□□□ 0.27
C19orf54-208ENST00000598352 U2SURPO15042 1029 aaKnown RBP16.73■□□□□ 0.27
C19orf54-208ENST00000598352 MTHFSDQ2M296 383 aaKnown RBP16.73■□□□□ 0.27
C19orf54-208ENST00000598352 C1orf141Q5JVX7 400 aa16.73■□□□□ 0.27
C19orf54-208ENST00000598352 ATG3Q9NT62 314 aa16.73■□□□□ 0.27
C19orf54-208ENST00000598352 CASZ1Q86V15 1759 aa16.72■□□□□ 0.27
C19orf54-208ENST00000598352 AKAP4Q5JQC9 854 aa16.72■□□□□ 0.27
C19orf54-208ENST00000598352 RSPH6AQ9H0K4 717 aa16.71■□□□□ 0.27
C19orf54-208ENST00000598352 LGR6Q9HBX8 967 aa16.71■□□□□ 0.27
C19orf54-208ENST00000598352 LOC102724428A0A0B4J2F2 783 aa16.7■□□□□ 0.26
C19orf54-208ENST00000598352 SIK1P57059 783 aa16.7■□□□□ 0.26
C19orf54-208ENST00000598352 SPON1Q9HCB6 807 aa16.7■□□□□ 0.26
C19orf54-208ENST00000598352 RNMTO43148 476 aaKnown RBP16.69■□□□□ 0.26
C19orf54-208ENST00000598352 ZBTB7AO95365 584 aa16.69■□□□□ 0.26
C19orf54-208ENST00000598352 CABP4P57796 275 aa16.69■□□□□ 0.26
C19orf54-208ENST00000598352 RALBP1Q15311 655 aa16.69■□□□□ 0.26
C19orf54-208ENST00000598352 PHACTR3Q96KR7 559 aa16.69■□□□□ 0.26
C19orf54-208ENST00000598352 SLC4A9Q96Q91 983 aa16.69■□□□□ 0.26
C19orf54-208ENST00000598352 NUDCQ9Y266 331 aa16.69■□□□□ 0.26
C19orf54-208ENST00000598352 PNPLA7Q6ZV29 1317 aa16.69■□□□□ 0.26
C19orf54-208ENST00000598352 PTGER2P43116 358 aa16.68■□□□□ 0.26
C19orf54-208ENST00000598352 NFATC2IPQ8NCF5 419 aa16.68■□□□□ 0.26
C19orf54-208ENST00000598352 U2AF1L5P0DN76 240 aaPredicted RBP16.67■□□□□ 0.26
C19orf54-208ENST00000598352 PRKAR2BP31323 418 aa16.67■□□□□ 0.26
C19orf54-208ENST00000598352 U2AF1Q01081 240 aaKnown RBP eCLIP16.67■□□□□ 0.26
C19orf54-208ENST00000598352 ITPK1Q13572 414 aa16.67■□□□□ 0.26
C19orf54-208ENST00000598352 SGIP1Q9BQI5 828 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms