RNA–Protein interactions for RNA: ENST00000597828.5

SOX2-OT-228, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 864 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-228ENST00000597828 AMPHP49418 695 aa16.99■□□□□ 0.31
SOX2-OT-228ENST00000597828 LRRC4BQ9NT99 713 aa16.99■□□□□ 0.31
SOX2-OT-228ENST00000597828 NSD2O96028 1365 aa16.99■□□□□ 0.31
SOX2-OT-228ENST00000597828 TMF1P82094 1093 aa16.98■□□□□ 0.31
SOX2-OT-228ENST00000597828 FYB1O15117 783 aa16.97■□□□□ 0.31
SOX2-OT-228ENST00000597828 USHBP1Q8N6Y0 703 aa16.97■□□□□ 0.31
SOX2-OT-228ENST00000597828 YY1P25490 414 aa16.96■□□□□ 0.31
SOX2-OT-228ENST00000597828 UTRNP46939 3433 aa16.96■□□□□ 0.31
SOX2-OT-228ENST00000597828 UBR3Q6ZT12 1888 aa16.95■□□□□ 0.3
SOX2-OT-228ENST00000597828 KCNQ4P56696 695 aa16.95■□□□□ 0.3
SOX2-OT-228ENST00000597828 SGIP1Q9BQI5 828 aa16.95■□□□□ 0.3
SOX2-OT-228ENST00000597828 VIRMAQ69YN4 1812 aaKnown RBP16.95■□□□□ 0.3
SOX2-OT-228ENST00000597828 NSD3Q9BZ95 1437 aa16.95■□□□□ 0.3
SOX2-OT-228ENST00000597828 NBPF6Q5VWK0 638 aa16.94■□□□□ 0.3
SOX2-OT-228ENST00000597828 SYTL4Q96C24 671 aaPredicted RBP16.94■□□□□ 0.3
SOX2-OT-228ENST00000597828 NBPF4Q96M43 638 aa16.94■□□□□ 0.3
SOX2-OT-228ENST00000597828 MTFR1LQ9H019 292 aa16.94■□□□□ 0.3
SOX2-OT-228ENST00000597828 SMG6Q86US8 1419 aaKnown RBP16.94■□□□□ 0.3
SOX2-OT-228ENST00000597828 FHDC1Q9C0D6 1143 aaPredicted RBP16.93■□□□□ 0.3
SOX2-OT-228ENST00000597828 SLC24A1O60721 1099 aa16.92■□□□□ 0.3
SOX2-OT-228ENST00000597828 PRIM1P49642 420 aaKnown RBP16.92■□□□□ 0.3
SOX2-OT-228ENST00000597828 ZCRB1Q8TBF4 217 aaKnown RBP16.92■□□□□ 0.3
SOX2-OT-228ENST00000597828 HSP90AB2PQ58FF8 381 aa16.91■□□□□ 0.3
SOX2-OT-228ENST00000597828 AKT1S1Q96B36 256 aa16.91■□□□□ 0.3
SOX2-OT-228ENST00000597828 INSRP06213 1382 aa16.9■□□□□ 0.3
SOX2-OT-228ENST00000597828 FLT4P35916 1363 aa16.9■□□□□ 0.3
SOX2-OT-228ENST00000597828 C4BP0C0L5 1744 aa16.9■□□□□ 0.3
SOX2-OT-228ENST00000597828 SYT17Q9BSW7 474 aa16.9■□□□□ 0.3
SOX2-OT-228ENST00000597828 CARD14Q9BXL6 1004 aa16.9■□□□□ 0.3
SOX2-OT-228ENST00000597828 PNPLA7Q6ZV29 1317 aa16.9■□□□□ 0.3
SOX2-OT-228ENST00000597828 EMILIN1Q9Y6C2 1016 aa16.89■□□□□ 0.29
SOX2-OT-228ENST00000597828 DCAF8L1A6NGE4 600 aa16.88■□□□□ 0.29
SOX2-OT-228ENST00000597828 SLC27A3Q5K4L6 730 aa16.88■□□□□ 0.29
SOX2-OT-228ENST00000597828 ARXQ96QS3 562 aa16.87■□□□□ 0.29
SOX2-OT-228ENST00000597828 NCAPD2Q15021 1401 aa16.87■□□□□ 0.29
SOX2-OT-228ENST00000597828 RAPGEF4Q8WZA2 1011 aa16.86■□□□□ 0.29
SOX2-OT-228ENST00000597828 KIF24Q5T7B8 1368 aa16.86■□□□□ 0.29
SOX2-OT-228ENST00000597828 TATP17735 454 aaPredicted RBP16.85■□□□□ 0.29
SOX2-OT-228ENST00000597828 CDCA8Q53HL2 280 aa16.85■□□□□ 0.29
SOX2-OT-228ENST00000597828 KLHL34Q8N239 644 aa16.84■□□□□ 0.29
SOX2-OT-228ENST00000597828 PCGF6Q9BYE7 350 aa16.84■□□□□ 0.29
SOX2-OT-228ENST00000597828 TFCP2L1Q9NZI6 479 aa16.84■□□□□ 0.29
SOX2-OT-228ENST00000597828 CCNL1Q9UK58 526 aaPredicted RBP16.84■□□□□ 0.29
SOX2-OT-228ENST00000597828 CGNL1Q0VF96 1302 aa16.84■□□□□ 0.29
SOX2-OT-228ENST00000597828 PCDH11XQ9BZA7 1347 aa16.84■□□□□ 0.29
SOX2-OT-228ENST00000597828 PCDH11YQ9BZA8 1340 aa16.84■□□□□ 0.29
SOX2-OT-228ENST00000597828 MAP3K5Q99683 1374 aa16.84■□□□□ 0.29
SOX2-OT-228ENST00000597828 GOLGB1Q14789 3259 aaKnown RBP16.84■□□□□ 0.29
SOX2-OT-228ENST00000597828 COL5A3P25940 1745 aaPredicted RBP16.82■□□□□ 0.28
SOX2-OT-228ENST00000597828 CYP27B1O15528 508 aa16.82■□□□□ 0.28
SOX2-OT-228ENST00000597828 POLR3GLQ9BT43 218 aa16.82■□□□□ 0.28
SOX2-OT-228ENST00000597828 PALLDQ8WX93 1383 aa16.81■□□□□ 0.28
SOX2-OT-228ENST00000597828 PPM1GO15355 546 aaPredicted RBP16.81■□□□□ 0.28
SOX2-OT-228ENST00000597828 SLC16A10Q8TF71 515 aa16.8■□□□□ 0.28
SOX2-OT-228ENST00000597828 MPRIPQ6WCQ1 1025 aa16.79■□□□□ 0.28
SOX2-OT-228ENST00000597828 COL23A1Q86Y22 540 aaPredicted RBP16.79■□□□□ 0.28
SOX2-OT-228ENST00000597828 SCN11AQ9UI33 1791 aa16.79■□□□□ 0.28
SOX2-OT-228ENST00000597828 C4AP0C0L4 1744 aa16.79■□□□□ 0.28
SOX2-OT-228ENST00000597828 POLD1P28340 1107 aa16.78■□□□□ 0.28
SOX2-OT-228ENST00000597828 NLGN2Q8NFZ4 835 aa16.78■□□□□ 0.28
SOX2-OT-228ENST00000597828 MYH14Q7Z406 1995 aaKnown RBP16.78■□□□□ 0.28
SOX2-OT-228ENST00000597828 MSH5O43196 834 aa16.77■□□□□ 0.28
SOX2-OT-228ENST00000597828 MSL1Q68DK7 614 aa16.77■□□□□ 0.28
SOX2-OT-228ENST00000597828 TIMELESSQ9UNS1 1208 aa16.77■□□□□ 0.28
SOX2-OT-228ENST00000597828 WASHC2AQ641Q2 1341 aa16.76■□□□□ 0.27
SOX2-OT-228ENST00000597828 CLSPNQ9HAW4 1339 aa16.76■□□□□ 0.27
SOX2-OT-228ENST00000597828 ZNF831Q5JPB2 1677 aa16.76■□□□□ 0.27
SOX2-OT-228ENST00000597828 KIF13BQ9NQT8 1826 aa16.76■□□□□ 0.27
SOX2-OT-228ENST00000597828 TNNT2P45379 298 aaPredicted RBP16.76■□□□□ 0.27
SOX2-OT-228ENST00000597828 ZNF784Q8NCA9 323 aaPredicted RBP16.76■□□□□ 0.27
SOX2-OT-228ENST00000597828 EYA1Q99502 592 aa16.76■□□□□ 0.27
SOX2-OT-228ENST00000597828 N4BP2Q86UW6 1770 aaPredicted RBP16.76■□□□□ 0.27
SOX2-OT-228ENST00000597828 KIAA1551Q9HCM1 1747 aa16.76■□□□□ 0.27
SOX2-OT-228ENST00000597828 AMIGO3Q86WK7 504 aa16.75■□□□□ 0.27
SOX2-OT-228ENST00000597828 PELP1Q8IZL8 1130 aaKnown RBP16.75■□□□□ 0.27
SOX2-OT-228ENST00000597828 POLKQ9UBT6 870 aa16.75■□□□□ 0.27
SOX2-OT-228ENST00000597828 HSPA5P11021 654 aaKnown RBP16.74■□□□□ 0.27
SOX2-OT-228ENST00000597828 SMIM5Q71RC9 77 aa16.74■□□□□ 0.27
SOX2-OT-228ENST00000597828 GPR162Q16538 588 aa16.73■□□□□ 0.27
SOX2-OT-228ENST00000597828 PIGBQ92521 554 aa16.73■□□□□ 0.27
SOX2-OT-228ENST00000597828 BRCA1P38398 1863 aaKnown RBP16.73■□□□□ 0.27
SOX2-OT-228ENST00000597828 TJP1Q07157 1748 aa16.73■□□□□ 0.27
SOX2-OT-228ENST00000597828 EIF4A2Q14240 407 aaKnown RBP16.72■□□□□ 0.27
SOX2-OT-228ENST00000597828 SPG7Q9UQ90 795 aa16.71■□□□□ 0.27
SOX2-OT-228ENST00000597828 NKX1-1Q15270 411 aaPredicted RBP16.7■□□□□ 0.26
SOX2-OT-228ENST00000597828 PHF14O94880 888 aa16.69■□□□□ 0.26
SOX2-OT-228ENST00000597828 PHKG2P15735 406 aa16.69■□□□□ 0.26
SOX2-OT-228ENST00000597828 YBX3P16989 372 aaKnown RBP eCLIP16.69■□□□□ 0.26
SOX2-OT-228ENST00000597828 EIF4G2P78344 907 aaKnown RBP eCLIP16.69■□□□□ 0.26
SOX2-OT-228ENST00000597828 LINC00116Q8NCU8 138 aa16.69■□□□□ 0.26
SOX2-OT-228ENST00000597828 AK7Q96M32 723 aa16.69■□□□□ 0.26
SOX2-OT-228ENST00000597828 PANK3Q9H999 370 aa16.69■□□□□ 0.26
SOX2-OT-228ENST00000597828 SMARCC1Q92922 1105 aaPredicted RBP16.68■□□□□ 0.26
SOX2-OT-228ENST00000597828 ASAP1Q9ULH1 1129 aa16.68■□□□□ 0.26
SOX2-OT-228ENST00000597828 IGSF1Q8N6C5 1336 aa16.68■□□□□ 0.26
SOX2-OT-228ENST00000597828 CICQ96RK0 1608 aaPredicted RBP16.67■□□□□ 0.26
SOX2-OT-228ENST00000597828 TMOD3Q9NYL9 352 aa16.67■□□□□ 0.26
SOX2-OT-228ENST00000597828 KDM6AO15550 1401 aaPredicted RBP16.67■□□□□ 0.26
SOX2-OT-228ENST00000597828 KDRP35968 1356 aa16.66■□□□□ 0.26
SOX2-OT-228ENST00000597828 LOC102724428A0A0B4J2F2 783 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms