RNA–Protein interactions for RNA: ENST00000597507.1

C19orf54-207, Transcript of chromosome 19 open reading frame 54, humanhuman

TSL 2

Gene C19orf54, Length 947 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf54-207ENST00000597507 ANKRD36BQ8N2N9 1353 aa23.35■■□□□ 1.33
C19orf54-207ENST00000597507 COL23A1Q86Y22 540 aaPredicted RBP23.34■■□□□ 1.33
C19orf54-207ENST00000597507 NSD2O96028 1365 aa23.34■■□□□ 1.33
C19orf54-207ENST00000597507 DOT1LQ8TEK3 1739 aa23.33■■□□□ 1.33
C19orf54-207ENST00000597507 HDGFL2Q7Z4V5 671 aaPredicted RBP23.32■■□□□ 1.32
C19orf54-207ENST00000597507 MSH5O43196 834 aa23.31■■□□□ 1.32
C19orf54-207ENST00000597507 CCNL1Q9UK58 526 aaPredicted RBP23.31■■□□□ 1.32
C19orf54-207ENST00000597507 RGPD2P0DJD1 1756 aa23.31■■□□□ 1.32
C19orf54-207ENST00000597507 EDC4Q6P2E9 1401 aaKnown RBP23.31■■□□□ 1.32
C19orf54-207ENST00000597507 NEUROD1Q13562 356 aa23.3■■□□□ 1.32
C19orf54-207ENST00000597507 FAM208AQ9UK61 1670 aaKnown RBP23.29■■□□□ 1.32
C19orf54-207ENST00000597507 MSL1Q68DK7 614 aa23.29■■□□□ 1.32
C19orf54-207ENST00000597507 ATP10DQ9P241 1426 aa23.29■■□□□ 1.32
C19orf54-207ENST00000597507 A0A1W2PP64 1363 aa23.28■■□□□ 1.32
C19orf54-207ENST00000597507 FBLN1P23142 703 aa23.28■■□□□ 1.32
C19orf54-207ENST00000597507 ZCRB1Q8TBF4 217 aaKnown RBP23.28■■□□□ 1.32
C19orf54-207ENST00000597507 TERF2IPQ9NYB0 399 aa23.26■■□□□ 1.31
C19orf54-207ENST00000597507 HOXC9P31274 260 aa23.25■■□□□ 1.31
C19orf54-207ENST00000597507 MAP3K19Q56UN5 1328 aa23.25■■□□□ 1.31
C19orf54-207ENST00000597507 MEGF6O75095 1541 aa23.24■■□□□ 1.31
C19orf54-207ENST00000597507 GPBP1L1Q9HC44 474 aaPredicted RBP23.23■■□□□ 1.31
C19orf54-207ENST00000597507 CD2APQ9Y5K6 639 aa23.23■■□□□ 1.31
C19orf54-207ENST00000597507 USP47Q96K76 1375 aa23.23■■□□□ 1.31
C19orf54-207ENST00000597507 CARD11Q9BXL7 1154 aa23.22■■□□□ 1.31
C19orf54-207ENST00000597507 AMPHP49418 695 aa23.21■■□□□ 1.31
C19orf54-207ENST00000597507 C5P01031 1676 aa23.19■■□□□ 1.3
C19orf54-207ENST00000597507 ADCY9O60503 1353 aa23.19■■□□□ 1.3
C19orf54-207ENST00000597507 HSPA6P17066 643 aa23.19■■□□□ 1.3
C19orf54-207ENST00000597507 NBPF6Q5VWK0 638 aa23.19■■□□□ 1.3
C19orf54-207ENST00000597507 ZNF526Q8TF50 670 aaPredicted RBP23.19■■□□□ 1.3
C19orf54-207ENST00000597507 COG3Q96JB2 828 aa23.19■■□□□ 1.3
C19orf54-207ENST00000597507 NBPF4Q96M43 638 aa23.19■■□□□ 1.3
C19orf54-207ENST00000597507 TAF1LQ8IZX4 1826 aa23.19■■□□□ 1.3
C19orf54-207ENST00000597507 PUS7Q96PZ0 661 aaKnown RBP23.18■■□□□ 1.3
C19orf54-207ENST00000597507 USHBP1Q8N6Y0 703 aa23.17■■□□□ 1.3
C19orf54-207ENST00000597507 AMIGO3Q86WK7 504 aa23.15■■□□□ 1.3
C19orf54-207ENST00000597507 FLAD1Q8NFF5 587 aa23.15■■□□□ 1.3
C19orf54-207ENST00000597507 WWC3Q9ULE0 1092 aa23.14■■□□□ 1.29
C19orf54-207ENST00000597507 RRS1Q15050 365 aaKnown RBP23.13■■□□□ 1.29
C19orf54-207ENST00000597507 SMIM5Q71RC9 77 aa23.13■■□□□ 1.29
C19orf54-207ENST00000597507 CGNL1Q0VF96 1302 aa23.12■■□□□ 1.29
C19orf54-207ENST00000597507 RAPGEF4Q8WZA2 1011 aa23.12■■□□□ 1.29
C19orf54-207ENST00000597507 PALLDQ8WX93 1383 aa23.12■■□□□ 1.29
C19orf54-207ENST00000597507 MPRIPQ6WCQ1 1025 aa23.11■■□□□ 1.29
C19orf54-207ENST00000597507 IGSF1Q8N6C5 1336 aa23.1■■□□□ 1.29
C19orf54-207ENST00000597507 C4BP0C0L5 1744 aa23.09■■□□□ 1.29
C19orf54-207ENST00000597507 TOGARAM1Q9Y4F4 1720 aa23.09■■□□□ 1.29
C19orf54-207ENST00000597507 TATP17735 454 aaPredicted RBP23.09■■□□□ 1.29
C19orf54-207ENST00000597507 TESK2Q96S53 571 aa23.09■■□□□ 1.29
C19orf54-207ENST00000597507 ITGB4P16144 1822 aa23.09■■□□□ 1.29
C19orf54-207ENST00000597507 UBR3Q6ZT12 1888 aa23.09■■□□□ 1.29
C19orf54-207ENST00000597507 KIF3CO14782 793 aa23.08■■□□□ 1.29
C19orf54-207ENST00000597507 RTL1A6NKG5 1358 aa23.08■■□□□ 1.29
C19orf54-207ENST00000597507 CYP27B1O15528 508 aa23.07■■□□□ 1.28
C19orf54-207ENST00000597507 FYB1O15117 783 aa23.06■■□□□ 1.28
C19orf54-207ENST00000597507 PHF14O94880 888 aa23.06■■□□□ 1.28
C19orf54-207ENST00000597507 HMGB2P26583 209 aaKnown RBP23.06■■□□□ 1.28
C19orf54-207ENST00000597507 HSP90AB2PQ58FF8 381 aa23.06■■□□□ 1.28
C19orf54-207ENST00000597507 AK7Q96M32 723 aa23.06■■□□□ 1.28
C19orf54-207ENST00000597507 PCDH11XQ9BZA7 1347 aa23.06■■□□□ 1.28
C19orf54-207ENST00000597507 PCDH11YQ9BZA8 1340 aa23.06■■□□□ 1.28
C19orf54-207ENST00000597507 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.05■■□□□ 1.28
C19orf54-207ENST00000597507 GGNBP2Q9H3C7 697 aa23.05■■□□□ 1.28
C19orf54-207ENST00000597507 ST20-MTHFSA0A0A6YYL1 179 aa23.03■■□□□ 1.28
C19orf54-207ENST00000597507 SMARCC1Q92922 1105 aaPredicted RBP23.03■■□□□ 1.28
C19orf54-207ENST00000597507 SMG6Q86US8 1419 aaKnown RBP23.02■■□□□ 1.28
C19orf54-207ENST00000597507 PIGBQ92521 554 aa23.02■■□□□ 1.28
C19orf54-207ENST00000597507 MAP2P11137 1827 aaKnown RBP23.01■■□□□ 1.27
C19orf54-207ENST00000597507 INSRP06213 1382 aa23.01■■□□□ 1.27
C19orf54-207ENST00000597507 LINC00116Q8NCU8 138 aa23■■□□□ 1.27
C19orf54-207ENST00000597507 SSFA2P28290 1259 aa22.99■■□□□ 1.27
C19orf54-207ENST00000597507 LOC102724428A0A0B4J2F2 783 aa22.97■■□□□ 1.27
C19orf54-207ENST00000597507 SIK1P57059 783 aa22.97■■□□□ 1.27
C19orf54-207ENST00000597507 NKX1-1Q15270 411 aaPredicted RBP22.97■■□□□ 1.27
C19orf54-207ENST00000597507 DNAJC5GQ8N7S2 189 aa22.97■■□□□ 1.27
C19orf54-207ENST00000597507 APLP1P51693 650 aa22.96■■□□□ 1.27
C19orf54-207ENST00000597507 NSD3Q9BZ95 1437 aa22.96■■□□□ 1.27
C19orf54-207ENST00000597507 CICQ96RK0 1608 aaPredicted RBP22.96■■□□□ 1.27
C19orf54-207ENST00000597507 PKD1L3Q7Z443 1732 aa22.96■■□□□ 1.27
C19orf54-207ENST00000597507 FLT4P35916 1363 aa22.95■■□□□ 1.26
C19orf54-207ENST00000597507 ITPK1Q13572 414 aa22.95■■□□□ 1.26
C19orf54-207ENST00000597507 N4BP2Q86UW6 1770 aaPredicted RBP22.94■■□□□ 1.26
C19orf54-207ENST00000597507 KIAA1551Q9HCM1 1747 aa22.94■■□□□ 1.26
C19orf54-207ENST00000597507 TOMM70O94826 608 aa22.93■■□□□ 1.26
C19orf54-207ENST00000597507 MMP10P09238 476 aa22.93■■□□□ 1.26
C19orf54-207ENST00000597507 ASAP1Q9ULH1 1129 aa22.93■■□□□ 1.26
C19orf54-207ENST00000597507 KIF13BQ9NQT8 1826 aa22.93■■□□□ 1.26
C19orf54-207ENST00000597507 GNPATO15228 680 aa22.92■■□□□ 1.26
C19orf54-207ENST00000597507 SLC24A1O60721 1099 aa22.92■■□□□ 1.26
C19orf54-207ENST00000597507 PXDNLA1KZ92 1463 aa22.92■■□□□ 1.26
C19orf54-207ENST00000597507 KIF24Q5T7B8 1368 aa22.91■■□□□ 1.26
C19orf54-207ENST00000597507 TONSLQ96HA7 1378 aa22.91■■□□□ 1.26
C19orf54-207ENST00000597507 EMILIN1Q9Y6C2 1016 aa22.91■■□□□ 1.26
C19orf54-207ENST00000597507 KIF20BQ96Q89 1820 aa22.91■■□□□ 1.26
C19orf54-207ENST00000597507 A0A0G2JLW4 131 aa22.9■■□□□ 1.26
C19orf54-207ENST00000597507 ATP6V1AP38606 617 aa22.9■■□□□ 1.26
C19orf54-207ENST00000597507 BCS1LQ9Y276 419 aa22.9■■□□□ 1.26
C19orf54-207ENST00000597507 NMRK2Q9NPI5 230 aa22.89■■□□□ 1.25
C19orf54-207ENST00000597507 TMOD3Q9NYL9 352 aa22.89■■□□□ 1.25
C19orf54-207ENST00000597507 SPG7Q9UQ90 795 aa22.89■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms