RNA–Protein interactions for RNA: ENST00000597369.1

IRF3-218, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-218ENST00000597369 NLRP2Q9NX02 1062 aa19■□□□□ 0.63
IRF3-218ENST00000597369 CCNL1Q9UK58 526 aaPredicted RBP18.99■□□□□ 0.63
IRF3-218ENST00000597369 ANKRD36BQ8N2N9 1353 aa18.98■□□□□ 0.63
IRF3-218ENST00000597369 NMRK2Q9NPI5 230 aa18.98■□□□□ 0.63
IRF3-218ENST00000597369 SOX12O15370 315 aa18.97■□□□□ 0.63
IRF3-218ENST00000597369 HMGB2P26583 209 aaKnown RBP18.97■□□□□ 0.63
IRF3-218ENST00000597369 PRIM1P49642 420 aaKnown RBP18.97■□□□□ 0.63
IRF3-218ENST00000597369 TTC21BQ7Z4L5 1316 aa18.97■□□□□ 0.63
IRF3-218ENST00000597369 NSD2O96028 1365 aa18.96■□□□□ 0.63
IRF3-218ENST00000597369 ZNF692Q9BU19 519 aaPredicted RBP18.96■□□□□ 0.63
IRF3-218ENST00000597369 DDX54Q8TDD1 881 aaKnown RBP18.95■□□□□ 0.62
IRF3-218ENST00000597369 SYTL4Q96C24 671 aaPredicted RBP18.95■□□□□ 0.62
IRF3-218ENST00000597369 TTC21AQ8NDW8 1320 aa18.95■□□□□ 0.62
IRF3-218ENST00000597369 DOT1LQ8TEK3 1739 aa18.94■□□□□ 0.62
IRF3-218ENST00000597369 KIAA1210Q9ULL0 1709 aa18.94■□□□□ 0.62
IRF3-218ENST00000597369 C5P01031 1676 aa18.93■□□□□ 0.62
IRF3-218ENST00000597369 USP54Q70EL1 1684 aa18.93■□□□□ 0.62
IRF3-218ENST00000597369 C16orf71Q8IYS4 520 aaPredicted RBP18.93■□□□□ 0.62
IRF3-218ENST00000597369 HSPA1AP0DMV8 641 aaKnown RBP18.92■□□□□ 0.62
IRF3-218ENST00000597369 HSPA1BP0DMV9 641 aaKnown RBP18.92■□□□□ 0.62
IRF3-218ENST00000597369 TAF1LQ8IZX4 1826 aa18.92■□□□□ 0.62
IRF3-218ENST00000597369 CENPJQ9HC77 1338 aaPredicted RBP18.9■□□□□ 0.62
IRF3-218ENST00000597369 LTN1O94822 1766 aa18.9■□□□□ 0.62
IRF3-218ENST00000597369 ANKRD24Q8TF21 1146 aa18.89■□□□□ 0.61
IRF3-218ENST00000597369 USP47Q96K76 1375 aa18.89■□□□□ 0.61
IRF3-218ENST00000597369 C10orf71Q711Q0 1435 aa18.89■□□□□ 0.61
IRF3-218ENST00000597369 KIF13BQ9NQT8 1826 aa18.87■□□□□ 0.61
IRF3-218ENST00000597369 USP31Q70CQ4 1352 aa18.85■□□□□ 0.61
IRF3-218ENST00000597369 PLEKHG2Q9H7P9 1386 aa18.85■□□□□ 0.61
IRF3-218ENST00000597369 UBR3Q6ZT12 1888 aa18.85■□□□□ 0.61
IRF3-218ENST00000597369 KIAA1551Q9HCM1 1747 aa18.84■□□□□ 0.61
IRF3-218ENST00000597369 FAM208AQ9UK61 1670 aaKnown RBP18.83■□□□□ 0.61
IRF3-218ENST00000597369 TGFB2P61812 414 aa18.83■□□□□ 0.6
IRF3-218ENST00000597369 SMC1BQ8NDV3 1235 aa18.83■□□□□ 0.6
IRF3-218ENST00000597369 TOGARAM1Q9Y4F4 1720 aa18.83■□□□□ 0.6
IRF3-218ENST00000597369 KDM2BQ8NHM5 1336 aa18.82■□□□□ 0.6
IRF3-218ENST00000597369 NBPF1Q3BBV0 1214 aa18.82■□□□□ 0.6
IRF3-218ENST00000597369 ARHGAP27Q6ZUM4 889 aa18.82■□□□□ 0.6
IRF3-218ENST00000597369 N4BP2Q86UW6 1770 aaPredicted RBP18.82■□□□□ 0.6
IRF3-218ENST00000597369 C4BP0C0L5 1744 aa18.82■□□□□ 0.6
IRF3-218ENST00000597369 PXDNLA1KZ92 1463 aa18.82■□□□□ 0.6
IRF3-218ENST00000597369 BCS1LQ9Y276 419 aa18.81■□□□□ 0.6
IRF3-218ENST00000597369 TNRC6CQ9HCJ0 1690 aaKnown RBP18.81■□□□□ 0.6
IRF3-218ENST00000597369 ZCRB1Q8TBF4 217 aaKnown RBP18.8■□□□□ 0.6
IRF3-218ENST00000597369 NSD3Q9BZ95 1437 aa18.8■□□□□ 0.6
IRF3-218ENST00000597369 PKD1L3Q7Z443 1732 aa18.8■□□□□ 0.6
IRF3-218ENST00000597369 BRCA1P38398 1863 aaKnown RBP18.8■□□□□ 0.6
IRF3-218ENST00000597369 EVC2Q86UK5 1308 aa18.79■□□□□ 0.6
IRF3-218ENST00000597369 C9orf131Q5VYM1 1079 aa18.79■□□□□ 0.6
IRF3-218ENST00000597369 AMIGO3Q86WK7 504 aa18.79■□□□□ 0.6
IRF3-218ENST00000597369 RRAGCQ9HB90 399 aa18.79■□□□□ 0.6
IRF3-218ENST00000597369 KTN1Q86UP2 1357 aaKnown RBP18.79■□□□□ 0.6
IRF3-218ENST00000597369 KCPQ6ZWJ8 1503 aa18.79■□□□□ 0.6
IRF3-218ENST00000597369 ARFGEF1Q9Y6D6 1849 aa18.79■□□□□ 0.6
IRF3-218ENST00000597369 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.78■□□□□ 0.6
IRF3-218ENST00000597369 AK7Q96M32 723 aa18.78■□□□□ 0.6
IRF3-218ENST00000597369 MON2Q7Z3U7 1717 aa18.77■□□□□ 0.6
IRF3-218ENST00000597369 SSFA2P28290 1259 aa18.77■□□□□ 0.6
IRF3-218ENST00000597369 IP6K1Q92551 441 aa18.76■□□□□ 0.59
IRF3-218ENST00000597369 PALLDQ8WX93 1383 aa18.76■□□□□ 0.59
IRF3-218ENST00000597369 A0A0G2JLW4 131 aa18.75■□□□□ 0.59
IRF3-218ENST00000597369 SBF1O95248 1867 aa18.75■□□□□ 0.59
IRF3-218ENST00000597369 PRDM10Q9NQV6 1147 aa18.74■□□□□ 0.59
IRF3-218ENST00000597369 FCHSD2O94868 740 aa18.73■□□□□ 0.59
IRF3-218ENST00000597369 PHF14O94880 888 aa18.73■□□□□ 0.59
IRF3-218ENST00000597369 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.72■□□□□ 0.59
IRF3-218ENST00000597369 MMP10P09238 476 aa18.71■□□□□ 0.59
IRF3-218ENST00000597369 SMIM5Q71RC9 77 aa18.71■□□□□ 0.59
IRF3-218ENST00000597369 NME9Q86XW9 330 aa18.71■□□□□ 0.59
IRF3-218ENST00000597369 SMARCC1Q92922 1105 aaPredicted RBP18.71■□□□□ 0.59
IRF3-218ENST00000597369 CGNL1Q0VF96 1302 aa18.71■□□□□ 0.59
IRF3-218ENST00000597369 RGPD2P0DJD1 1756 aa18.7■□□□□ 0.58
IRF3-218ENST00000597369 MEGF6O75095 1541 aa18.7■□□□□ 0.58
IRF3-218ENST00000597369 FAM161AQ3B820 660 aa18.7■□□□□ 0.58
IRF3-218ENST00000597369 DPEP1P16444 411 aa18.69■□□□□ 0.58
IRF3-218ENST00000597369 MAP2P11137 1827 aaKnown RBP18.68■□□□□ 0.58
IRF3-218ENST00000597369 ITGB4P16144 1822 aa18.68■□□□□ 0.58
IRF3-218ENST00000597369 KCNA3P22001 575 aa18.68■□□□□ 0.58
IRF3-218ENST00000597369 LTV1Q96GA3 475 aaPredicted RBP18.68■□□□□ 0.58
IRF3-218ENST00000597369 RNF181Q9P0P0 153 aa18.68■□□□□ 0.58
IRF3-218ENST00000597369 SBNO2Q9Y2G9 1366 aa18.68■□□□□ 0.58
IRF3-218ENST00000597369 MPRIPQ6WCQ1 1025 aa18.67■□□□□ 0.58
IRF3-218ENST00000597369 ZC3H4Q9UPT8 1303 aaKnown RBP18.67■□□□□ 0.58
IRF3-218ENST00000597369 FOXN1O15353 648 aa18.66■□□□□ 0.58
IRF3-218ENST00000597369 VEGFAP15692 232 aaPredicted RBP18.66■□□□□ 0.58
IRF3-218ENST00000597369 DCAF5Q96JK2 942 aa18.66■□□□□ 0.58
IRF3-218ENST00000597369 NLGN1Q8N2Q7 840 aa18.65■□□□□ 0.58
IRF3-218ENST00000597369 RAB3GAP2Q9H2M9 1393 aa18.65■□□□□ 0.58
IRF3-218ENST00000597369 CCDC87Q9NVE4 849 aa18.64■□□□□ 0.57
IRF3-218ENST00000597369 PIM2Q9P1W9 311 aa18.64■□□□□ 0.57
IRF3-218ENST00000597369 LINC00116Q8NCU8 138 aa18.63■□□□□ 0.57
IRF3-218ENST00000597369 CD163L1Q9NR16 1453 aa18.63■□□□□ 0.57
IRF3-218ENST00000597369 CTCFP49711 727 aaPredicted RBP18.62■□□□□ 0.57
IRF3-218ENST00000597369 RGS19P49795 217 aa18.62■□□□□ 0.57
IRF3-218ENST00000597369 CREBZFQ9NS37 354 aa18.62■□□□□ 0.57
IRF3-218ENST00000597369 C4AP0C0L4 1744 aa18.62■□□□□ 0.57
IRF3-218ENST00000597369 PCDH11XQ9BZA7 1347 aa18.61■□□□□ 0.57
IRF3-218ENST00000597369 PCDH11YQ9BZA8 1340 aa18.61■□□□□ 0.57
IRF3-218ENST00000597369 GLTPD2A6NH11 291 aa18.61■□□□□ 0.57
IRF3-218ENST00000597369 GNPATO15228 680 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms