RNA–Protein interactions for RNA: ENST00000597347.5

SOX2-OT-226, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 1,342 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-226ENST00000597347 FAM208AQ9UK61 1670 aaKnown RBP13.35□□□□□ -0.27
SOX2-OT-226ENST00000597347 TNS2Q63HR2 1409 aa13.35□□□□□ -0.27
SOX2-OT-226ENST00000597347 SMG6Q86US8 1419 aaKnown RBP13.35□□□□□ -0.27
SOX2-OT-226ENST00000597347 PEAK1Q9H792 1746 aa13.34□□□□□ -0.27
SOX2-OT-226ENST00000597347 RGPD5Q99666 1765 aa13.34□□□□□ -0.27
SOX2-OT-226ENST00000597347 RGPD1P0DJD0 1748 aa13.33□□□□□ -0.28
SOX2-OT-226ENST00000597347 EN1Q05925 392 aaPredicted RBP13.33□□□□□ -0.28
SOX2-OT-226ENST00000597347 ZCRB1Q8TBF4 217 aaKnown RBP13.33□□□□□ -0.28
SOX2-OT-226ENST00000597347 EMILIN1Q9Y6C2 1016 aa13.33□□□□□ -0.28
SOX2-OT-226ENST00000597347 LRRC37A3O60309 1634 aa13.32□□□□□ -0.28
SOX2-OT-226ENST00000597347 HMGB2P26583 209 aaKnown RBP13.32□□□□□ -0.28
SOX2-OT-226ENST00000597347 POLR3GLQ9BT43 218 aa13.32□□□□□ -0.28
SOX2-OT-226ENST00000597347 KIF20BQ96Q89 1820 aa13.31□□□□□ -0.28
SOX2-OT-226ENST00000597347 MORC1Q86VD1 984 aa13.31□□□□□ -0.28
SOX2-OT-226ENST00000597347 RAPGEF4Q8WZA2 1011 aa13.31□□□□□ -0.28
SOX2-OT-226ENST00000597347 LTV1Q96GA3 475 aaPredicted RBP13.31□□□□□ -0.28
SOX2-OT-226ENST00000597347 TATP17735 454 aaPredicted RBP13.3□□□□□ -0.28
SOX2-OT-226ENST00000597347 NKX1-1Q15270 411 aaPredicted RBP13.3□□□□□ -0.28
SOX2-OT-226ENST00000597347 EZH2Q15910 746 aaKnown RBP13.3□□□□□ -0.28
SOX2-OT-226ENST00000597347 EYA1Q99502 592 aa13.3□□□□□ -0.28
SOX2-OT-226ENST00000597347 ANKRD26Q9UPS8 1709 aa13.29□□□□□ -0.28
SOX2-OT-226ENST00000597347 WNK3Q9BYP7 1800 aa13.29□□□□□ -0.28
SOX2-OT-226ENST00000597347 PROM2Q8N271 834 aa13.28□□□□□ -0.28
SOX2-OT-226ENST00000597347 TNS1Q9HBL0 1735 aaKnown RBP13.27□□□□□ -0.28
SOX2-OT-226ENST00000597347 EIF4A2Q14240 407 aaKnown RBP13.27□□□□□ -0.29
SOX2-OT-226ENST00000597347 NBPF14Q5TI25 921 aa13.27□□□□□ -0.29
SOX2-OT-226ENST00000597347 IGSF1Q8N6C5 1336 aa13.27□□□□□ -0.29
SOX2-OT-226ENST00000597347 SPG7Q9UQ90 795 aa13.26□□□□□ -0.29
SOX2-OT-226ENST00000597347 RGPD3A6NKT7 1758 aaPredicted RBP13.26□□□□□ -0.29
SOX2-OT-226ENST00000597347 RGPD4Q7Z3J3 1758 aa13.26□□□□□ -0.29
SOX2-OT-226ENST00000597347 PPM1GO15355 546 aaPredicted RBP13.25□□□□□ -0.29
SOX2-OT-226ENST00000597347 POLA2Q14181 598 aa13.25□□□□□ -0.29
SOX2-OT-226ENST00000597347 DDX54Q8TDD1 881 aaKnown RBP13.25□□□□□ -0.29
SOX2-OT-226ENST00000597347 PCDH11XQ9BZA7 1347 aa13.25□□□□□ -0.29
SOX2-OT-226ENST00000597347 PCDH11YQ9BZA8 1340 aa13.25□□□□□ -0.29
SOX2-OT-226ENST00000597347 MEGF6O75095 1541 aa13.24□□□□□ -0.29
SOX2-OT-226ENST00000597347 KCNQ2O43526 872 aa13.24□□□□□ -0.29
SOX2-OT-226ENST00000597347 IL13P35225 146 aa13.24□□□□□ -0.29
SOX2-OT-226ENST00000597347 AMOTQ4VCS5 1084 aa13.24□□□□□ -0.29
SOX2-OT-226ENST00000597347 SLC27A3Q5K4L6 730 aa13.24□□□□□ -0.29
SOX2-OT-226ENST00000597347 PTF1AQ7RTS3 328 aa13.24□□□□□ -0.29
SOX2-OT-226ENST00000597347 MAP2P11137 1827 aaKnown RBP13.24□□□□□ -0.29
SOX2-OT-226ENST00000597347 SBF2Q86WG5 1849 aa13.24□□□□□ -0.29
SOX2-OT-226ENST00000597347 KDRP35968 1356 aa13.23□□□□□ -0.29
SOX2-OT-226ENST00000597347 MTHFSP49914 203 aa13.23□□□□□ -0.29
SOX2-OT-226ENST00000597347 TXNRD1Q16881 649 aa13.23□□□□□ -0.29
SOX2-OT-226ENST00000597347 ATF5Q9Y2D1 282 aaPredicted RBP13.23□□□□□ -0.29
SOX2-OT-226ENST00000597347 CYP27B1O15528 508 aa13.22□□□□□ -0.29
SOX2-OT-226ENST00000597347 ZEB1P37275 1124 aaPredicted RBP13.22□□□□□ -0.29
SOX2-OT-226ENST00000597347 TNNT2P45379 298 aaPredicted RBP13.22□□□□□ -0.29
SOX2-OT-226ENST00000597347 PRIM1P49642 420 aaKnown RBP13.21□□□□□ -0.29
SOX2-OT-226ENST00000597347 IFNL2Q8IZJ0 200 aa13.21□□□□□ -0.29
SOX2-OT-226ENST00000597347 HSP90AB1P08238 724 aaKnown RBP13.2□□□□□ -0.3
SOX2-OT-226ENST00000597347 PLEKHO1Q53GL0 409 aaPredicted RBP13.2□□□□□ -0.3
SOX2-OT-226ENST00000597347 USHBP1Q8N6Y0 703 aa13.2□□□□□ -0.3
SOX2-OT-226ENST00000597347 NHSQ6T4R5 1651 aa13.2□□□□□ -0.3
SOX2-OT-226ENST00000597347 RREB1Q92766 1687 aa13.19□□□□□ -0.3
SOX2-OT-226ENST00000597347 ERVV-2B6SEH9 535 aa13.18□□□□□ -0.3
SOX2-OT-226ENST00000597347 ATXN8OSP0DMR3 200 aa13.18□□□□□ -0.3
SOX2-OT-226ENST00000597347 PHKG2P15735 406 aa13.18□□□□□ -0.3
SOX2-OT-226ENST00000597347 ACSBG1Q96GR2 724 aa13.18□□□□□ -0.3
SOX2-OT-226ENST00000597347 DIAPH1O60610 1272 aaKnown RBP13.17□□□□□ -0.3
SOX2-OT-226ENST00000597347 R3HDM1Q15032 1099 aaKnown RBP13.17□□□□□ -0.3
SOX2-OT-226ENST00000597347 SLC15A2Q16348 729 aa13.17□□□□□ -0.3
SOX2-OT-226ENST00000597347 CC2D1BQ5T0F9 858 aaKnown RBP13.17□□□□□ -0.3
SOX2-OT-226ENST00000597347 SMARCC1Q92922 1105 aaPredicted RBP13.17□□□□□ -0.3
SOX2-OT-226ENST00000597347 DCAF5Q96JK2 942 aa13.17□□□□□ -0.3
SOX2-OT-226ENST00000597347 RGPD2P0DJD1 1756 aa13.17□□□□□ -0.3
SOX2-OT-226ENST00000597347 PKD1L3Q7Z443 1732 aa13.16□□□□□ -0.3
SOX2-OT-226ENST00000597347 SULT6B1Q6IMI4 303 aa13.15□□□□□ -0.3
SOX2-OT-226ENST00000597347 LRRC4BQ9NT99 713 aa13.15□□□□□ -0.3
SOX2-OT-226ENST00000597347 SLC16A10Q8TF71 515 aa13.14□□□□□ -0.31
SOX2-OT-226ENST00000597347 AKT1S1Q96B36 256 aa13.14□□□□□ -0.31
SOX2-OT-226ENST00000597347 STK32BQ9NY57 414 aa13.14□□□□□ -0.31
SOX2-OT-226ENST00000597347 SHANK3Q9BYB0 1731 aa13.14□□□□□ -0.31
SOX2-OT-226ENST00000597347 NUP188Q5SRE5 1749 aa13.14□□□□□ -0.31
SOX2-OT-226ENST00000597347 PSDA5PKW4 1024 aaPredicted RBP13.13□□□□□ -0.31
SOX2-OT-226ENST00000597347 PIGBQ92521 554 aa13.13□□□□□ -0.31
SOX2-OT-226ENST00000597347 PPP2R1AP30153 589 aa13.13□□□□□ -0.31
SOX2-OT-226ENST00000597347 AKAP4Q5JQC9 854 aa13.13□□□□□ -0.31
SOX2-OT-226ENST00000597347 SYTL4Q96C24 671 aaPredicted RBP13.13□□□□□ -0.31
SOX2-OT-226ENST00000597347 CFAP53Q96M91 514 aa13.13□□□□□ -0.31
SOX2-OT-226ENST00000597347 SPON1Q9HCB6 807 aa13.13□□□□□ -0.31
SOX2-OT-226ENST00000597347 ANO8Q9HCE9 1232 aaPredicted RBP13.13□□□□□ -0.31
SOX2-OT-226ENST00000597347 LRP5O75197 1615 aa13.12□□□□□ -0.31
SOX2-OT-226ENST00000597347 NUDCQ9Y266 331 aa13.12□□□□□ -0.31
SOX2-OT-226ENST00000597347 FCHSD2O94868 740 aa13.11□□□□□ -0.31
SOX2-OT-226ENST00000597347 RALBP1Q15311 655 aa13.11□□□□□ -0.31
SOX2-OT-226ENST00000597347 MPRIPQ6WCQ1 1025 aa13.11□□□□□ -0.31
SOX2-OT-226ENST00000597347 AEBP1Q8IUX7 1158 aa13.11□□□□□ -0.31
SOX2-OT-226ENST00000597347 FLAD1Q8NFF5 587 aa13.11□□□□□ -0.31
SOX2-OT-226ENST00000597347 TMOD3Q9NYL9 352 aa13.11□□□□□ -0.31
SOX2-OT-226ENST00000597347 BTAF1O14981 1849 aa13.1□□□□□ -0.31
SOX2-OT-226ENST00000597347 COL3A1P02461 1466 aaPredicted RBP13.1□□□□□ -0.31
SOX2-OT-226ENST00000597347 C1orf141Q5JVX7 400 aa13.1□□□□□ -0.31
SOX2-OT-226ENST00000597347 ZNF530Q6P9A1 599 aaPredicted RBP13.1□□□□□ -0.31
SOX2-OT-226ENST00000597347 RBM42Q9BTD8 480 aaKnown RBP13.1□□□□□ -0.31
SOX2-OT-226ENST00000597347 CCNL1Q9UK58 526 aaPredicted RBP13.1□□□□□ -0.31
SOX2-OT-226ENST00000597347 ZBTB12Q9Y330 459 aaPredicted RBP13.1□□□□□ -0.31
SOX2-OT-226ENST00000597347 MTFR1LQ9H019 292 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms