RNA–Protein interactions for RNA: ENST00000596580.2

FARP1-219, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5 BASIC

Gene FARP1, Length 13,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-219ENST00000596580 CCDC27Q2M243 656 aa9.42□□□□□ -0.9
FARP1-219ENST00000596580 CCDC112Q8NEF3 446 aa9.42□□□□□ -0.9
FARP1-219ENST00000596580 TSPYL1Q9H0U9 437 aa9.42□□□□□ -0.9
FARP1-219ENST00000596580 HSP90AB3PQ58FF7 597 aa9.42□□□□□ -0.9
FARP1-219ENST00000596580 NUTM2FA1L443 756 aa9.42□□□□□ -0.9
FARP1-219ENST00000596580 MPHOSPH8Q99549 860 aa9.42□□□□□ -0.9
FARP1-219ENST00000596580 PTPRCP08575 1304 aa9.42□□□□□ -0.9
FARP1-219ENST00000596580 RAD21O60216 631 aa9.42□□□□□ -0.9
FARP1-219ENST00000596580 CETN2P41208 172 aa9.42□□□□□ -0.9
FARP1-219ENST00000596580 SCAF11Q99590 1463 aaKnown RBP9.42□□□□□ -0.9
FARP1-219ENST00000596580 GBP2P32456 591 aaPredicted RBP9.42□□□□□ -0.9
FARP1-219ENST00000596580 PPP4R3BQ5MIZ7 849 aa9.42□□□□□ -0.9
FARP1-219ENST00000596580 FEZ1Q99689 392 aa9.42□□□□□ -0.9
FARP1-219ENST00000596580 GOLGA6L9A6NEM1 432 aa9.42□□□□□ -0.9
FARP1-219ENST00000596580 ME1P48163 572 aa9.41□□□□□ -0.9
FARP1-219ENST00000596580 PANK1Q8TE04 598 aa9.41□□□□□ -0.9
FARP1-219ENST00000596580 PKNOX2Q96KN3 472 aa9.41□□□□□ -0.9
FARP1-219ENST00000596580 MCM5P33992 734 aa9.41□□□□□ -0.9
FARP1-219ENST00000596580 UBAC1Q9BSL1 405 aa9.41□□□□□ -0.9
FARP1-219ENST00000596580 KRT18P05783 430 aaKnown RBP9.41□□□□□ -0.9
FARP1-219ENST00000596580 TNIP1Q15025 636 aa9.41□□□□□ -0.9
FARP1-219ENST00000596580 DUOX2Q9NRD8 1548 aa9.41□□□□□ -0.9
FARP1-219ENST00000596580 GRIN2AQ12879 1464 aa9.41□□□□□ -0.9
FARP1-219ENST00000596580 JAKMIP3Q5VZ66 844 aa9.41□□□□□ -0.9
FARP1-219ENST00000596580 DDX12PQ92771 950 aa9.41□□□□□ -0.9
FARP1-219ENST00000596580 SOGA3Q5TF21 947 aa9.41□□□□□ -0.9
FARP1-219ENST00000596580 BLOC1S2Q6QNY1 142 aa9.41□□□□□ -0.9
FARP1-219ENST00000596580 GTPBP4Q9BZE4 634 aaKnown RBP9.41□□□□□ -0.9
FARP1-219ENST00000596580 ARHGEF12Q9NZN5 1544 aa9.41□□□□□ -0.9
FARP1-219ENST00000596580 HMOX1P09601 288 aa9.41□□□□□ -0.9
FARP1-219ENST00000596580 SERPINC1P01008 464 aa9.41□□□□□ -0.9
FARP1-219ENST00000596580 ANKLE2Q86XL3 938 aa9.41□□□□□ -0.9
FARP1-219ENST00000596580 GLRX3O76003 335 aaKnown RBP9.4□□□□□ -0.9
FARP1-219ENST00000596580 TUBB4BP68371 445 aa9.4□□□□□ -0.9
FARP1-219ENST00000596580 POTEB2H3BUK9 544 aa9.4□□□□□ -0.9
FARP1-219ENST00000596580 CHD1LQ86WJ1 897 aa9.4□□□□□ -0.9
FARP1-219ENST00000596580 CCDC61Q9Y6R9 512 aa9.4□□□□□ -0.9
FARP1-219ENST00000596580 ADGRL1O94910 1474 aa9.4□□□□□ -0.9
FARP1-219ENST00000596580 DDX11Q96FC9 970 aa9.4□□□□□ -0.9
FARP1-219ENST00000596580 CNNM1Q9NRU3 951 aa9.4□□□□□ -0.9
FARP1-219ENST00000596580 SEPT7Q16181 437 aaKnown RBP9.4□□□□□ -0.91
FARP1-219ENST00000596580 KIF1BPQ96EK5 621 aa9.4□□□□□ -0.91
FARP1-219ENST00000596580 CABP2Q9NPB3 220 aa9.4□□□□□ -0.91
FARP1-219ENST00000596580 TXNDC2Q86VQ3 553 aa9.4□□□□□ -0.91
FARP1-219ENST00000596580 RNF41Q9H4P4 317 aaPredicted RBP9.4□□□□□ -0.91
FARP1-219ENST00000596580 STARD3NLO95772 234 aa9.39□□□□□ -0.91
FARP1-219ENST00000596580 BACH2Q9BYV9 841 aa9.39□□□□□ -0.91
FARP1-219ENST00000596580 MSH5O43196 834 aa9.39□□□□□ -0.91
FARP1-219ENST00000596580 PDILTQ8N807 584 aa9.39□□□□□ -0.91
FARP1-219ENST00000596580 PRAM1Q96QH2 718 aa9.39□□□□□ -0.91
FARP1-219ENST00000596580 CCDC181Q5TID7 509 aa9.39□□□□□ -0.91
FARP1-219ENST00000596580 CCDC12Q8WUD4 166 aaPredicted RBP9.39□□□□□ -0.91
FARP1-219ENST00000596580 CCDC83Q8IWF9 413 aa9.39□□□□□ -0.91
FARP1-219ENST00000596580 RRP9O43818 475 aaKnown RBP9.39□□□□□ -0.91
FARP1-219ENST00000596580 IKQ13123 557 aaPredicted RBP9.39□□□□□ -0.91
FARP1-219ENST00000596580 SPATA32Q96LK8 384 aa9.39□□□□□ -0.91
FARP1-219ENST00000596580 RPRD2Q5VT52 1461 aaKnown RBP9.39□□□□□ -0.91
FARP1-219ENST00000596580 ARID3AQ99856 593 aa9.39□□□□□ -0.91
FARP1-219ENST00000596580 TUBB4AP04350 444 aa9.39□□□□□ -0.91
FARP1-219ENST00000596580 FMNL2Q96PY5 1086 aa9.39□□□□□ -0.91
FARP1-219ENST00000596580 SEC63Q9UGP8 760 aaKnown RBP9.39□□□□□ -0.91
FARP1-219ENST00000596580 LARP1BQ659C4 914 aaKnown RBP9.39□□□□□ -0.91
FARP1-219ENST00000596580 IL16Q14005 1332 aa9.39□□□□□ -0.91
FARP1-219ENST00000596580 NSD3Q9BZ95 1437 aa9.39□□□□□ -0.91
FARP1-219ENST00000596580 SLC4A2P04920 1241 aa9.39□□□□□ -0.91
FARP1-219ENST00000596580 ZSCAN12O43309 604 aa9.39□□□□□ -0.91
FARP1-219ENST00000596580 CYB5RLQ6IPT4 315 aa9.39□□□□□ -0.91
FARP1-219ENST00000596580 EHBP1Q8NDI1 1231 aa9.39□□□□□ -0.91
FARP1-219ENST00000596580 FOXD4L6Q3SYB3 417 aaPredicted RBP9.38□□□□□ -0.91
FARP1-219ENST00000596580 FOXD4L3Q6VB84 417 aaPredicted RBP9.38□□□□□ -0.91
FARP1-219ENST00000596580 HMG20BQ9P0W2 317 aa9.38□□□□□ -0.91
FARP1-219ENST00000596580 TEX14Q8IWB6 1497 aa9.38□□□□□ -0.91
FARP1-219ENST00000596580 IGHMBP2P38935 993 aaKnown RBP9.38□□□□□ -0.91
FARP1-219ENST00000596580 ZFYVE27Q5T4F4 411 aa9.38□□□□□ -0.91
FARP1-219ENST00000596580 ZNF530Q6P9A1 599 aaPredicted RBP9.38□□□□□ -0.91
FARP1-219ENST00000596580 CDK19Q9BWU1 502 aa9.38□□□□□ -0.91
FARP1-219ENST00000596580 GSDMDP57764 484 aa9.38□□□□□ -0.91
FARP1-219ENST00000596580 TRAF1Q13077 416 aa9.38□□□□□ -0.91
FARP1-219ENST00000596580 CEP126Q9P2H0 1117 aa9.38□□□□□ -0.91
FARP1-219ENST00000596580 GNAT3A8MTJ3 354 aa9.38□□□□□ -0.91
FARP1-219ENST00000596580 CABP4P57796 275 aa9.38□□□□□ -0.91
FARP1-219ENST00000596580 GGNBP2Q9H3C7 697 aa9.38□□□□□ -0.91
FARP1-219ENST00000596580 NFE2L2Q16236 605 aa9.38□□□□□ -0.91
FARP1-219ENST00000596580 KIF1BO60333 1816 aa9.38□□□□□ -0.91
FARP1-219ENST00000596580 NOB1Q9ULX3 412 aaKnown RBP9.38□□□□□ -0.91
FARP1-219ENST00000596580 FIBPO43427 364 aa9.38□□□□□ -0.91
FARP1-219ENST00000596580 CCDC148Q8NFR7 591 aa9.38□□□□□ -0.91
FARP1-219ENST00000596580 CFAP74Q9C0B2 1584 aa9.38□□□□□ -0.91
FARP1-219ENST00000596580 PDE4CQ08493 712 aa9.38□□□□□ -0.91
FARP1-219ENST00000596580 NUP62CLQ9H1M0 184 aa9.37□□□□□ -0.91
FARP1-219ENST00000596580 SFPQP23246 707 aaKnown RBP eCLIP9.37□□□□□ -0.916e-7■■■□□ 15.6
FARP1-219ENST00000596580 SLC26A8Q96RN1 970 aa9.37□□□□□ -0.91
FARP1-219ENST00000596580 ASXL1Q8IXJ9 1541 aa9.37□□□□□ -0.91
FARP1-219ENST00000596580 TTF1Q15361 905 aaPredicted RBP9.37□□□□□ -0.91
FARP1-219ENST00000596580 PDZRN3Q9UPQ7 1066 aa9.37□□□□□ -0.91
FARP1-219ENST00000596580 GOLGA6L10A0A0M3HER8 536 aa9.37□□□□□ -0.91
FARP1-219ENST00000596580 EHMT1Q9H9B1 1298 aa9.37□□□□□ -0.91
FARP1-219ENST00000596580 HYPKQ9NX55 129 aa9.37□□□□□ -0.91
FARP1-219ENST00000596580 SHANK2Q9UPX8 1470 aa9.37□□□□□ -0.91
FARP1-219ENST00000596580 TMOD2Q9NZR1 351 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms