RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

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Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 KCNQ2O43526 872 aa17.89■□□□□ 0.45
USE1-207ENST00000596136 USHBP1Q8N6Y0 703 aa17.89■□□□□ 0.45
USE1-207ENST00000596136 PROM2Q8N271 834 aa17.88■□□□□ 0.45
USE1-207ENST00000596136 RAPGEF4Q8WZA2 1011 aa17.88■□□□□ 0.45
USE1-207ENST00000596136 KAT6BQ8WYB5 2073 aa17.87■□□□□ 0.45
USE1-207ENST00000596136 TNNT2P45379 298 aaPredicted RBP17.87■□□□□ 0.45
USE1-207ENST00000596136 MORC1Q86VD1 984 aa17.87■□□□□ 0.45
USE1-207ENST00000596136 DDX54Q8TDD1 881 aaKnown RBP17.87■□□□□ 0.45
USE1-207ENST00000596136 PSDA5PKW4 1024 aaPredicted RBP17.86■□□□□ 0.45
USE1-207ENST00000596136 TATP17735 454 aaPredicted RBP17.86■□□□□ 0.45
USE1-207ENST00000596136 ACSBG1Q96GR2 724 aa17.86■□□□□ 0.45
USE1-207ENST00000596136 EYA1Q99502 592 aa17.86■□□□□ 0.45
USE1-207ENST00000596136 EIF4A2Q14240 407 aaKnown RBP17.85■□□□□ 0.45
USE1-207ENST00000596136 R3HDM1Q15032 1099 aaKnown RBP17.85■□□□□ 0.45
USE1-207ENST00000596136 NBPF14Q5TI25 921 aa17.84■□□□□ 0.45
USE1-207ENST00000596136 NPC1L1Q9UHC9 1359 aa17.83■□□□□ 0.45
USE1-207ENST00000596136 BTAF1O14981 1849 aa17.83■□□□□ 0.44
USE1-207ENST00000596136 PLEKHG2Q9H7P9 1386 aa17.82■□□□□ 0.44
USE1-207ENST00000596136 PKD1L3Q7Z443 1732 aa17.82■□□□□ 0.44
USE1-207ENST00000596136 TXNRD1Q16881 649 aa17.82■□□□□ 0.44
USE1-207ENST00000596136 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.82■□□□□ 0.44
USE1-207ENST00000596136 IGSF1Q8N6C5 1336 aa17.81■□□□□ 0.44
USE1-207ENST00000596136 PCDH11XQ9BZA7 1347 aa17.81■□□□□ 0.44
USE1-207ENST00000596136 PCDH11YQ9BZA8 1340 aa17.81■□□□□ 0.44
USE1-207ENST00000596136 LRP5O75197 1615 aa17.8■□□□□ 0.44
USE1-207ENST00000596136 CYP27B1O15528 508 aa17.8■□□□□ 0.44
USE1-207ENST00000596136 PRIM1P49642 420 aaKnown RBP17.8■□□□□ 0.44
USE1-207ENST00000596136 DOT1LQ8TEK3 1739 aa17.78■□□□□ 0.44
USE1-207ENST00000596136 NKX1-1Q15270 411 aaPredicted RBP17.78■□□□□ 0.44
USE1-207ENST00000596136 ANO8Q9HCE9 1232 aaPredicted RBP17.78■□□□□ 0.44
USE1-207ENST00000596136 SPG7Q9UQ90 795 aa17.78■□□□□ 0.44
USE1-207ENST00000596136 IL13P35225 146 aa17.76■□□□□ 0.43
USE1-207ENST00000596136 MTHFSP49914 203 aa17.75■□□□□ 0.43
USE1-207ENST00000596136 CC2D1BQ5T0F9 858 aaKnown RBP17.75■□□□□ 0.43
USE1-207ENST00000596136 PAPPAQ13219 1627 aa17.74■□□□□ 0.43
USE1-207ENST00000596136 SLC15A2Q16348 729 aa17.74■□□□□ 0.43
USE1-207ENST00000596136 SLC27A3Q5K4L6 730 aa17.74■□□□□ 0.43
USE1-207ENST00000596136 SYTL4Q96C24 671 aaPredicted RBP17.74■□□□□ 0.43
USE1-207ENST00000596136 LRRC4BQ9NT99 713 aa17.74■□□□□ 0.43
USE1-207ENST00000596136 LY75O60449 1722 aa17.73■□□□□ 0.43
USE1-207ENST00000596136 KDRP35968 1356 aa17.73■□□□□ 0.43
USE1-207ENST00000596136 PHKG2P15735 406 aa17.72■□□□□ 0.43
USE1-207ENST00000596136 IFNL2Q8IZJ0 200 aa17.72■□□□□ 0.43
USE1-207ENST00000596136 STK32BQ9NY57 414 aa17.72■□□□□ 0.43
USE1-207ENST00000596136 TOGARAM1Q9Y4F4 1720 aa17.72■□□□□ 0.43
USE1-207ENST00000596136 ITGB4P16144 1822 aa17.71■□□□□ 0.43
USE1-207ENST00000596136 CASZ1Q86V15 1759 aa17.71■□□□□ 0.43
USE1-207ENST00000596136 AEBP1Q8IUX7 1158 aa17.7■□□□□ 0.42
USE1-207ENST00000596136 AMOTQ4VCS5 1084 aa17.69■□□□□ 0.42
USE1-207ENST00000596136 PLEKHO1Q53GL0 409 aaPredicted RBP17.69■□□□□ 0.42
USE1-207ENST00000596136 SULT6B1Q6IMI4 303 aa17.69■□□□□ 0.42
USE1-207ENST00000596136 AKT1S1Q96B36 256 aa17.69■□□□□ 0.42
USE1-207ENST00000596136 MPRIPQ6WCQ1 1025 aa17.67■□□□□ 0.42
USE1-207ENST00000596136 PIGBQ92521 554 aa17.67■□□□□ 0.42
USE1-207ENST00000596136 PDGFDQ9GZP0 370 aaPredicted RBP17.67■□□□□ 0.42
USE1-207ENST00000596136 SPON1Q9HCB6 807 aa17.67■□□□□ 0.42
USE1-207ENST00000596136 DIAPH1O60610 1272 aaKnown RBP17.66■□□□□ 0.42
USE1-207ENST00000596136 ZNF827Q17R98 1081 aa17.66■□□□□ 0.42
USE1-207ENST00000596136 COL3A1P02461 1466 aaPredicted RBP17.66■□□□□ 0.42
USE1-207ENST00000596136 HSP90AB1P08238 724 aaKnown RBP17.65■□□□□ 0.42
USE1-207ENST00000596136 SMARCC1Q92922 1105 aaPredicted RBP17.65■□□□□ 0.42
USE1-207ENST00000596136 DCAF5Q96JK2 942 aa17.65■□□□□ 0.42
USE1-207ENST00000596136 CCNL1Q9UK58 526 aaPredicted RBP17.65■□□□□ 0.42
USE1-207ENST00000596136 QSER1Q2KHR3 1735 aa17.64■□□□□ 0.41
USE1-207ENST00000596136 ERVV-2B6SEH9 535 aa17.64■□□□□ 0.41
USE1-207ENST00000596136 HMGB2P26583 209 aaKnown RBP17.64■□□□□ 0.41
USE1-207ENST00000596136 KCNQ4P56696 695 aa17.64■□□□□ 0.41
USE1-207ENST00000596136 PALLDQ8WX93 1383 aa17.64■□□□□ 0.41
USE1-207ENST00000596136 ZNF530Q6P9A1 599 aaPredicted RBP17.63■□□□□ 0.41
USE1-207ENST00000596136 TMOD3Q9NYL9 352 aa17.63■□□□□ 0.41
USE1-207ENST00000596136 KDM6AO15550 1401 aaPredicted RBP17.62■□□□□ 0.41
USE1-207ENST00000596136 CNGB1Q14028 1251 aaPredicted RBP17.61■□□□□ 0.41
USE1-207ENST00000596136 TAF1LQ8IZX4 1826 aa17.61■□□□□ 0.41
USE1-207ENST00000596136 HMOX1P09601 288 aa17.6■□□□□ 0.41
USE1-207ENST00000596136 PPP2R1AP30153 589 aa17.6■□□□□ 0.41
USE1-207ENST00000596136 PTGER2P43116 358 aa17.6■□□□□ 0.41
USE1-207ENST00000596136 MTFR1LQ9H019 292 aa17.6■□□□□ 0.41
USE1-207ENST00000596136 ASAP1Q9ULH1 1129 aa17.6■□□□□ 0.41
USE1-207ENST00000596136 PNPLA7Q6ZV29 1317 aa17.6■□□□□ 0.41
USE1-207ENST00000596136 TUBGCP6Q96RT7 1819 aa17.59■□□□□ 0.41
USE1-207ENST00000596136 ZBTB7AO95365 584 aa17.59■□□□□ 0.41
USE1-207ENST00000596136 C1orf141Q5JVX7 400 aa17.59■□□□□ 0.41
USE1-207ENST00000596136 SLC16A10Q8TF71 515 aa17.59■□□□□ 0.41
USE1-207ENST00000596136 SGIP1Q9BQI5 828 aa17.59■□□□□ 0.41
USE1-207ENST00000596136 ATG3Q9NT62 314 aa17.59■□□□□ 0.41
USE1-207ENST00000596136 C5P01031 1676 aa17.58■□□□□ 0.41
USE1-207ENST00000596136 AKAP4Q5JQC9 854 aa17.58■□□□□ 0.4
USE1-207ENST00000596136 TFCP2L1Q9NZI6 479 aa17.58■□□□□ 0.4
USE1-207ENST00000596136 LOC102724428A0A0B4J2F2 783 aa17.57■□□□□ 0.4
USE1-207ENST00000596136 SIK1P57059 783 aa17.57■□□□□ 0.4
USE1-207ENST00000596136 CFAP53Q96M91 514 aa17.57■□□□□ 0.4
USE1-207ENST00000596136 SCN11AQ9UI33 1791 aa17.56■□□□□ 0.4
USE1-207ENST00000596136 COL24A1Q17RW2 1714 aa17.56■□□□□ 0.4
USE1-207ENST00000596136 ATF5Q9Y2D1 282 aaPredicted RBP17.56■□□□□ 0.4
USE1-207ENST00000596136 ZNF831Q5JPB2 1677 aa17.55■□□□□ 0.4
USE1-207ENST00000596136 CABP4P57796 275 aa17.55■□□□□ 0.4
USE1-207ENST00000596136 MTHFSDQ2M296 383 aaKnown RBP17.55■□□□□ 0.4
USE1-207ENST00000596136 ADAMTS7Q9UKP4 1686 aa17.55■□□□□ 0.4
USE1-207ENST00000596136 U2SURPO15042 1029 aaKnown RBP17.54■□□□□ 0.4
USE1-207ENST00000596136 C4BP0C0L5 1744 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms