RNA–Protein interactions for RNA: ENST00000595792.1

PNKP-206, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 645 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-206ENST00000595792 PPP1R1BQ9UD71 204 aaPredicted RBP24.78■■□□□ 1.56
PNKP-206ENST00000595792 ANKRD26Q9UPS8 1709 aa24.77■■□□□ 1.56
PNKP-206ENST00000595792 SLC15A2Q16348 729 aa24.76■■□□□ 1.55
PNKP-206ENST00000595792 HSP90AB2PQ58FF8 381 aa24.76■■□□□ 1.55
PNKP-206ENST00000595792 POLR3GLQ9BT43 218 aa24.75■■□□□ 1.55
PNKP-206ENST00000595792 SMG6Q86US8 1419 aaKnown RBP24.75■■□□□ 1.55
PNKP-206ENST00000595792 INSRP06213 1382 aa24.73■■□□□ 1.55
PNKP-206ENST00000595792 FLT4P35916 1363 aa24.73■■□□□ 1.55
PNKP-206ENST00000595792 ZCRB1Q8TBF4 217 aaKnown RBP24.73■■□□□ 1.55
PNKP-206ENST00000595792 SYTL4Q96C24 671 aaPredicted RBP24.73■■□□□ 1.55
PNKP-206ENST00000595792 LRRC4BQ9NT99 713 aa24.73■■□□□ 1.55
PNKP-206ENST00000595792 EMILIN1Q9Y6C2 1016 aa24.73■■□□□ 1.55
PNKP-206ENST00000595792 NSD2O96028 1365 aa24.72■■□□□ 1.55
PNKP-206ENST00000595792 ZNF827Q17R98 1081 aa24.72■■□□□ 1.55
PNKP-206ENST00000595792 ATF5Q9Y2D1 282 aaPredicted RBP24.72■■□□□ 1.55
PNKP-206ENST00000595792 PRIM1P49642 420 aaKnown RBP24.71■■□□□ 1.55
PNKP-206ENST00000595792 PTGER2P43116 358 aa24.69■■□□□ 1.54
PNKP-206ENST00000595792 KCNQ4P56696 695 aa24.69■■□□□ 1.54
PNKP-206ENST00000595792 LY75O60449 1722 aa24.67■■□□□ 1.54
PNKP-206ENST00000595792 PPM1GO15355 546 aaPredicted RBP24.67■■□□□ 1.54
PNKP-206ENST00000595792 RAPGEF4Q8WZA2 1011 aa24.67■■□□□ 1.54
PNKP-206ENST00000595792 TUBGCP6Q96RT7 1819 aa24.67■■□□□ 1.54
PNKP-206ENST00000595792 KIF24Q5T7B8 1368 aa24.67■■□□□ 1.54
PNKP-206ENST00000595792 TATP17735 454 aaPredicted RBP24.65■■□□□ 1.54
PNKP-206ENST00000595792 CGNL1Q0VF96 1302 aa24.64■■□□□ 1.54
PNKP-206ENST00000595792 TOGARAM1Q9Y4F4 1720 aa24.64■■□□□ 1.53
PNKP-206ENST00000595792 PKD1L3Q7Z443 1732 aa24.63■■□□□ 1.53
PNKP-206ENST00000595792 AKT1S1Q96B36 256 aa24.62■■□□□ 1.53
PNKP-206ENST00000595792 MTFR1LQ9H019 292 aa24.62■■□□□ 1.53
PNKP-206ENST00000595792 PANK3Q9H999 370 aa24.62■■□□□ 1.53
PNKP-206ENST00000595792 QSER1Q2KHR3 1735 aa24.61■■□□□ 1.53
PNKP-206ENST00000595792 SLC27A3Q5K4L6 730 aa24.61■■□□□ 1.53
PNKP-206ENST00000595792 NCAPD2Q15021 1401 aa24.61■■□□□ 1.53
PNKP-206ENST00000595792 TNNT2P45379 298 aaPredicted RBP24.6■■□□□ 1.53
PNKP-206ENST00000595792 SGIP1Q9BQI5 828 aa24.6■■□□□ 1.53
PNKP-206ENST00000595792 PCDH11XQ9BZA7 1347 aa24.6■■□□□ 1.53
PNKP-206ENST00000595792 PCDH11YQ9BZA8 1340 aa24.6■■□□□ 1.53
PNKP-206ENST00000595792 CYP27B1O15528 508 aa24.58■■□□□ 1.53
PNKP-206ENST00000595792 POLKQ9UBT6 870 aa24.58■■□□□ 1.53
PNKP-206ENST00000595792 FHDC1Q9C0D6 1143 aaPredicted RBP24.57■■□□□ 1.52
PNKP-206ENST00000595792 WASHC2AQ641Q2 1341 aa24.57■■□□□ 1.52
PNKP-206ENST00000595792 PNPLA7Q6ZV29 1317 aa24.57■■□□□ 1.52
PNKP-206ENST00000595792 CCNL1Q9UK58 526 aaPredicted RBP24.56■■□□□ 1.52
PNKP-206ENST00000595792 EYA1Q99502 592 aa24.55■■□□□ 1.52
PNKP-206ENST00000595792 ITGB4P16144 1822 aa24.55■■□□□ 1.52
PNKP-206ENST00000595792 KIF7Q2M1P5 1343 aa24.55■■□□□ 1.52
PNKP-206ENST00000595792 C5P01031 1676 aa24.53■■□□□ 1.52
PNKP-206ENST00000595792 TFCP2L1Q9NZI6 479 aa24.53■■□□□ 1.52
PNKP-206ENST00000595792 MPRIPQ6WCQ1 1025 aa24.52■■□□□ 1.52
PNKP-206ENST00000595792 SYT17Q9BSW7 474 aa24.52■■□□□ 1.52
PNKP-206ENST00000595792 EIF4A2Q14240 407 aaKnown RBP24.51■■□□□ 1.51
PNKP-206ENST00000595792 ARXQ96QS3 562 aa24.51■■□□□ 1.51
PNKP-206ENST00000595792 PALLDQ8WX93 1383 aa24.51■■□□□ 1.51
PNKP-206ENST00000595792 COL24A1Q17RW2 1714 aa24.5■■□□□ 1.51
PNKP-206ENST00000595792 YY1P25490 414 aa24.5■■□□□ 1.51
PNKP-206ENST00000595792 TAF1LQ8IZX4 1826 aa24.49■■□□□ 1.51
PNKP-206ENST00000595792 DCAF8L1A6NGE4 600 aa24.48■■□□□ 1.51
PNKP-206ENST00000595792 SPG7Q9UQ90 795 aa24.46■■□□□ 1.51
PNKP-206ENST00000595792 UTRNP46939 3433 aa24.45■■□□□ 1.5
PNKP-206ENST00000595792 KLHL34Q8N239 644 aa24.45■■□□□ 1.5
PNKP-206ENST00000595792 SLC16A10Q8TF71 515 aa24.45■■□□□ 1.5
PNKP-206ENST00000595792 COL23A1Q86Y22 540 aaPredicted RBP24.44■■□□□ 1.5
PNKP-206ENST00000595792 PIGBQ92521 554 aa24.44■■□□□ 1.5
PNKP-206ENST00000595792 C4BP0C0L5 1744 aa24.44■■□□□ 1.5
PNKP-206ENST00000595792 MSH5O43196 834 aa24.43■■□□□ 1.5
PNKP-206ENST00000595792 NKX1-1Q15270 411 aaPredicted RBP24.43■■□□□ 1.5
PNKP-206ENST00000595792 AMER1Q5JTC6 1135 aaPredicted RBP24.43■■□□□ 1.5
PNKP-206ENST00000595792 IGSF1Q8N6C5 1336 aa24.42■■□□□ 1.5
PNKP-206ENST00000595792 PHKG2P15735 406 aa24.42■■□□□ 1.5
PNKP-206ENST00000595792 MAP3K5Q99683 1374 aa24.42■■□□□ 1.5
PNKP-206ENST00000595792 PER1O15534 1290 aaPredicted RBP24.41■■□□□ 1.5
PNKP-206ENST00000595792 MSL1Q68DK7 614 aa24.41■■□□□ 1.5
PNKP-206ENST00000595792 MORC1Q86VD1 984 aa24.41■■□□□ 1.5
PNKP-206ENST00000595792 POLD1P28340 1107 aa24.4■■□□□ 1.5
PNKP-206ENST00000595792 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.4■■□□□ 1.5
PNKP-206ENST00000595792 KNSTRNQ9Y448 316 aa24.4■■□□□ 1.5
PNKP-206ENST00000595792 SMIM5Q71RC9 77 aa24.39■■□□□ 1.49
PNKP-206ENST00000595792 AMIGO3Q86WK7 504 aa24.39■■□□□ 1.49
PNKP-206ENST00000595792 IFNL2Q8IZJ0 200 aa24.38■■□□□ 1.49
PNKP-206ENST00000595792 AEBP1Q8IUX7 1158 aa24.37■■□□□ 1.49
PNKP-206ENST00000595792 SMARCC1Q92922 1105 aaPredicted RBP24.37■■□□□ 1.49
PNKP-206ENST00000595792 TMOD3Q9NYL9 352 aa24.37■■□□□ 1.49
PNKP-206ENST00000595792 UBR3Q6ZT12 1888 aa24.36■■□□□ 1.49
PNKP-206ENST00000595792 NLGN2Q8NFZ4 835 aa24.36■■□□□ 1.49
PNKP-206ENST00000595792 ASAP1Q9ULH1 1129 aa24.36■■□□□ 1.49
PNKP-206ENST00000595792 LINC00116Q8NCU8 138 aa24.34■■□□□ 1.49
PNKP-206ENST00000595792 AK7Q96M32 723 aa24.34■■□□□ 1.49
PNKP-206ENST00000595792 GOLGB1Q14789 3259 aaKnown RBP24.33■■□□□ 1.49
PNKP-206ENST00000595792 LOC102724428A0A0B4J2F2 783 aa24.33■■□□□ 1.49
PNKP-206ENST00000595792 PHF14O94880 888 aa24.33■■□□□ 1.49
PNKP-206ENST00000595792 SIK1P57059 783 aa24.33■■□□□ 1.49
PNKP-206ENST00000595792 ITPK1Q13572 414 aa24.32■■□□□ 1.48
PNKP-206ENST00000595792 KDM6AO15550 1401 aaPredicted RBP24.32■■□□□ 1.48
PNKP-206ENST00000595792 PELP1Q8IZL8 1130 aaKnown RBP24.31■■□□□ 1.48
PNKP-206ENST00000595792 ATG3Q9NT62 314 aa24.31■■□□□ 1.48
PNKP-206ENST00000595792 VIRMAQ69YN4 1812 aaKnown RBP24.31■■□□□ 1.48
PNKP-206ENST00000595792 PLEKHG2Q9H7P9 1386 aa24.3■■□□□ 1.48
PNKP-206ENST00000595792 ZNF530Q6P9A1 599 aaPredicted RBP24.3■■□□□ 1.48
PNKP-206ENST00000595792 GPR162Q16538 588 aa24.29■■□□□ 1.48
PNKP-206ENST00000595792 CHD4Q14839 1912 aa24.28■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 198.7 ms