RNA–Protein interactions for RNA: ENST00000595560.1

ZNF550-207, Transcript of zinc finger protein 550, humanhuman

TSL 1 (best)

Gene ZNF550, Length 565 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550-207ENST00000595560 BTAF1O14981 1849 aa21.61■■□□□ 1.05
ZNF550-207ENST00000595560 MORC1Q86VD1 984 aa21.6■■□□□ 1.05
ZNF550-207ENST00000595560 RAPGEF4Q8WZA2 1011 aa21.6■■□□□ 1.05
ZNF550-207ENST00000595560 SRCAPQ6ZRS2 3230 aa21.6■■□□□ 1.05
ZNF550-207ENST00000595560 PKD1L3Q7Z443 1732 aa21.6■■□□□ 1.05
ZNF550-207ENST00000595560 PER1O15534 1290 aaPredicted RBP21.59■■□□□ 1.05
ZNF550-207ENST00000595560 ZCRB1Q8TBF4 217 aaKnown RBP21.59■■□□□ 1.05
ZNF550-207ENST00000595560 DOT1LQ8TEK3 1739 aa21.59■■□□□ 1.05
ZNF550-207ENST00000595560 DDX54Q8TDD1 881 aaKnown RBP21.58■■□□□ 1.05
ZNF550-207ENST00000595560 KCNQ2O43526 872 aa21.57■■□□□ 1.04
ZNF550-207ENST00000595560 TATP17735 454 aaPredicted RBP21.57■■□□□ 1.04
ZNF550-207ENST00000595560 ACSBG1Q96GR2 724 aa21.56■■□□□ 1.04
ZNF550-207ENST00000595560 EIF4A2Q14240 407 aaKnown RBP21.55■■□□□ 1.04
ZNF550-207ENST00000595560 EYA1Q99502 592 aa21.55■■□□□ 1.04
ZNF550-207ENST00000595560 NPC1L1Q9UHC9 1359 aa21.54■■□□□ 1.04
ZNF550-207ENST00000595560 PSDA5PKW4 1024 aaPredicted RBP21.54■■□□□ 1.04
ZNF550-207ENST00000595560 LRP5O75197 1615 aa21.54■■□□□ 1.04
ZNF550-207ENST00000595560 PCDH11XQ9BZA7 1347 aa21.54■■□□□ 1.04
ZNF550-207ENST00000595560 PCDH11YQ9BZA8 1340 aa21.54■■□□□ 1.04
ZNF550-207ENST00000595560 PLEKHG2Q9H7P9 1386 aa21.52■■□□□ 1.04
ZNF550-207ENST00000595560 R3HDM1Q15032 1099 aaKnown RBP21.52■■□□□ 1.04
ZNF550-207ENST00000595560 NBPF14Q5TI25 921 aa21.51■■□□□ 1.03
ZNF550-207ENST00000595560 IGSF1Q8N6C5 1336 aa21.51■■□□□ 1.03
ZNF550-207ENST00000595560 PROM2Q8N271 834 aa21.5■■□□□ 1.03
ZNF550-207ENST00000595560 TXNRD1Q16881 649 aa21.48■■□□□ 1.03
ZNF550-207ENST00000595560 CC2D1BQ5T0F9 858 aaKnown RBP21.48■■□□□ 1.03
ZNF550-207ENST00000595560 TOGARAM1Q9Y4F4 1720 aa21.48■■□□□ 1.03
ZNF550-207ENST00000595560 LY75O60449 1722 aa21.47■■□□□ 1.03
ZNF550-207ENST00000595560 CYP27B1O15528 508 aa21.47■■□□□ 1.03
ZNF550-207ENST00000595560 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.47■■□□□ 1.03
ZNF550-207ENST00000595560 PAPPAQ13219 1627 aa21.47■■□□□ 1.03
ZNF550-207ENST00000595560 ITGB4P16144 1822 aa21.46■■□□□ 1.03
ZNF550-207ENST00000595560 PRIM1P49642 420 aaKnown RBP21.46■■□□□ 1.03
ZNF550-207ENST00000595560 SPG7Q9UQ90 795 aa21.46■■□□□ 1.03
ZNF550-207ENST00000595560 SYTL4Q96C24 671 aaPredicted RBP21.45■■□□□ 1.02
ZNF550-207ENST00000595560 ANO8Q9HCE9 1232 aaPredicted RBP21.44■■□□□ 1.02
ZNF550-207ENST00000595560 MTHFSP49914 203 aa21.43■■□□□ 1.02
ZNF550-207ENST00000595560 CASZ1Q86V15 1759 aa21.43■■□□□ 1.02
ZNF550-207ENST00000595560 IL13P35225 146 aa21.42■■□□□ 1.02
ZNF550-207ENST00000595560 KDRP35968 1356 aa21.41■■□□□ 1.02
ZNF550-207ENST00000595560 NKX1-1Q15270 411 aaPredicted RBP21.41■■□□□ 1.02
ZNF550-207ENST00000595560 SLC27A3Q5K4L6 730 aa21.39■■□□□ 1.01
ZNF550-207ENST00000595560 PHKG2P15735 406 aa21.38■■□□□ 1.01
ZNF550-207ENST00000595560 AEBP1Q8IUX7 1158 aa21.38■■□□□ 1.01
ZNF550-207ENST00000595560 IFNL2Q8IZJ0 200 aa21.38■■□□□ 1.01
ZNF550-207ENST00000595560 LRRC4BQ9NT99 713 aa21.38■■□□□ 1.01
ZNF550-207ENST00000595560 STK32BQ9NY57 414 aa21.38■■□□□ 1.01
ZNF550-207ENST00000595560 COL3A1P02461 1466 aaPredicted RBP21.38■■□□□ 1.01
ZNF550-207ENST00000595560 SLC15A2Q16348 729 aa21.37■■□□□ 1.01
ZNF550-207ENST00000595560 QSER1Q2KHR3 1735 aa21.37■■□□□ 1.01
ZNF550-207ENST00000595560 CNGB1Q14028 1251 aaPredicted RBP21.36■■□□□ 1.01
ZNF550-207ENST00000595560 SULT6B1Q6IMI4 303 aa21.36■■□□□ 1.01
ZNF550-207ENST00000595560 AMOTQ4VCS5 1084 aa21.35■■□□□ 1.01
ZNF550-207ENST00000595560 PLEKHO1Q53GL0 409 aaPredicted RBP21.35■■□□□ 1.01
ZNF550-207ENST00000595560 DIAPH1O60610 1272 aaKnown RBP21.34■■□□□ 1.01
ZNF550-207ENST00000595560 MPRIPQ6WCQ1 1025 aa21.34■■□□□ 1.01
ZNF550-207ENST00000595560 C5P01031 1676 aa21.34■■□□□ 1.01
ZNF550-207ENST00000595560 TAF1LQ8IZX4 1826 aa21.33■■□□□ 1.01
ZNF550-207ENST00000595560 TUBGCP6Q96RT7 1819 aa21.33■■□□□ 1.01
ZNF550-207ENST00000595560 PALLDQ8WX93 1383 aa21.32■■□□□ 1
ZNF550-207ENST00000595560 HSP90AB1P08238 724 aaKnown RBP21.31■■□□□ 1
ZNF550-207ENST00000595560 ZNF530Q6P9A1 599 aaPredicted RBP21.31■■□□□ 1
ZNF550-207ENST00000595560 PIGBQ92521 554 aa21.31■■□□□ 1
ZNF550-207ENST00000595560 CCNL1Q9UK58 526 aaPredicted RBP21.31■■□□□ 1
ZNF550-207ENST00000595560 ZNF827Q17R98 1081 aa21.3■■□□□ 1
ZNF550-207ENST00000595560 SMARCC1Q92922 1105 aaPredicted RBP21.3■■□□□ 1
ZNF550-207ENST00000595560 AKT1S1Q96B36 256 aa21.3■■□□□ 1
ZNF550-207ENST00000595560 DCAF5Q96JK2 942 aa21.3■■□□□ 1
ZNF550-207ENST00000595560 TMOD3Q9NYL9 352 aa21.3■■□□□ 1
ZNF550-207ENST00000595560 KDM6AO15550 1401 aaPredicted RBP21.29■■□□□ 1
ZNF550-207ENST00000595560 SCN11AQ9UI33 1791 aa21.29■■□□□ 1
ZNF550-207ENST00000595560 KCNQ4P56696 695 aa21.29■■□□□ 1
ZNF550-207ENST00000595560 PDGFDQ9GZP0 370 aaPredicted RBP21.29■■□□□ 1
ZNF550-207ENST00000595560 SPON1Q9HCB6 807 aa21.29■■□□□ 1
ZNF550-207ENST00000595560 VIRMAQ69YN4 1812 aaKnown RBP21.28■■□□□ 1
ZNF550-207ENST00000595560 ERVV-2B6SEH9 535 aa21.27■■□□□ 1
ZNF550-207ENST00000595560 HMOX1P09601 288 aa21.27■■□□□ 1
ZNF550-207ENST00000595560 PPP2R1AP30153 589 aa21.27■■□□□ 1
ZNF550-207ENST00000595560 C1orf141Q5JVX7 400 aa21.27■■□□□ 1
ZNF550-207ENST00000595560 HMGB2P26583 209 aaKnown RBP21.26■□□□□ 0.99
ZNF550-207ENST00000595560 CFAP53Q96M91 514 aa21.26■□□□□ 0.99
ZNF550-207ENST00000595560 ZNF831Q5JPB2 1677 aa21.24■□□□□ 0.99
ZNF550-207ENST00000595560 C4BP0C0L5 1744 aa21.24■□□□□ 0.99
ZNF550-207ENST00000595560 ADAMTS7Q9UKP4 1686 aa21.24■□□□□ 0.99
ZNF550-207ENST00000595560 U2SURPO15042 1029 aaKnown RBP21.23■□□□□ 0.99
ZNF550-207ENST00000595560 ZBTB7AO95365 584 aa21.23■□□□□ 0.99
ZNF550-207ENST00000595560 COL24A1Q17RW2 1714 aa21.22■□□□□ 0.99
ZNF550-207ENST00000595560 AKAP4Q5JQC9 854 aa21.22■□□□□ 0.99
ZNF550-207ENST00000595560 MTFR1LQ9H019 292 aa21.22■□□□□ 0.99
ZNF550-207ENST00000595560 TFCP2L1Q9NZI6 479 aa21.22■□□□□ 0.99
ZNF550-207ENST00000595560 ASAP1Q9ULH1 1129 aa21.22■□□□□ 0.99
ZNF550-207ENST00000595560 PNPLA7Q6ZV29 1317 aa21.22■□□□□ 0.99
ZNF550-207ENST00000595560 LOC102724428A0A0B4J2F2 783 aa21.21■□□□□ 0.99
ZNF550-207ENST00000595560 ZEB1P37275 1124 aaPredicted RBP21.21■□□□□ 0.99
ZNF550-207ENST00000595560 SIK1P57059 783 aa21.21■□□□□ 0.99
ZNF550-207ENST00000595560 MRC1P22897 1456 aa21.2■□□□□ 0.98
ZNF550-207ENST00000595560 UBR3Q6ZT12 1888 aa21.2■□□□□ 0.98
ZNF550-207ENST00000595560 CABP4P57796 275 aa21.2■□□□□ 0.98
ZNF550-207ENST00000595560 ATG3Q9NT62 314 aa21.2■□□□□ 0.98
ZNF550-207ENST00000595560 PTGER2P43116 358 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 225.2 ms