RNA–Protein interactions for RNA: ENST00000595235.5

SSX4B-201, Transcript of SSX family member 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX4B, Length 1,221 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4B-201ENST00000595235 MEGF6O75095 1541 aa8.13□□□□□ -1.11
SSX4B-201ENST00000595235 PARD3Q8TEW0 1356 aa8.13□□□□□ -1.11
SSX4B-201ENST00000595235 MAP2P11137 1827 aaKnown RBP8.13□□□□□ -1.11
SSX4B-201ENST00000595235 C11orf95C9JLR9 678 aaPredicted RBP8.13□□□□□ -1.11
SSX4B-201ENST00000595235 IL2RBP14784 551 aa8.13□□□□□ -1.11
SSX4B-201ENST00000595235 AMPHP49418 695 aa8.13□□□□□ -1.11
SSX4B-201ENST00000595235 BTAF1O14981 1849 aa8.13□□□□□ -1.11
SSX4B-201ENST00000595235 EXOC5O00471 708 aa8.12□□□□□ -1.11
SSX4B-201ENST00000595235 FLT4P35916 1363 aa8.11□□□□□ -1.11
SSX4B-201ENST00000595235 R3HDM1Q15032 1099 aaKnown RBP8.11□□□□□ -1.11
SSX4B-201ENST00000595235 EMILIN1Q9Y6C2 1016 aa8.11□□□□□ -1.11
SSX4B-201ENST00000595235 SMG6Q86US8 1419 aaKnown RBP8.11□□□□□ -1.11
SSX4B-201ENST00000595235 INSRP06213 1382 aa8.1□□□□□ -1.11
SSX4B-201ENST00000595235 KIF24Q5T7B8 1368 aa8.1□□□□□ -1.11
SSX4B-201ENST00000595235 CGNL1Q0VF96 1302 aa8.1□□□□□ -1.11
SSX4B-201ENST00000595235 PKD1L3Q7Z443 1732 aa8.1□□□□□ -1.11
SSX4B-201ENST00000595235 KCNQ2O43526 872 aa8.1□□□□□ -1.11
SSX4B-201ENST00000595235 HSP90AB2PQ58FF8 381 aa8.1□□□□□ -1.11
SSX4B-201ENST00000595235 NBPF6Q5VWK0 638 aa8.1□□□□□ -1.11
SSX4B-201ENST00000595235 USHBP1Q8N6Y0 703 aa8.1□□□□□ -1.11
SSX4B-201ENST00000595235 ACSBG1Q96GR2 724 aa8.1□□□□□ -1.11
SSX4B-201ENST00000595235 NBPF4Q96M43 638 aa8.1□□□□□ -1.11
SSX4B-201ENST00000595235 BCL11BQ9C0K0 894 aaPredicted RBP8.1□□□□□ -1.11
SSX4B-201ENST00000595235 PAPPAQ13219 1627 aa8.1□□□□□ -1.11
SSX4B-201ENST00000595235 CASZ1Q86V15 1759 aa8.1□□□□□ -1.11
SSX4B-201ENST00000595235 TOGARAM1Q9Y4F4 1720 aa8.09□□□□□ -1.11
SSX4B-201ENST00000595235 PLSCR1O15162 318 aa8.09□□□□□ -1.11
SSX4B-201ENST00000595235 PANK3Q9H999 370 aa8.09□□□□□ -1.11
SSX4B-201ENST00000595235 NCAPD2Q15021 1401 aa8.09□□□□□ -1.11
SSX4B-201ENST00000595235 KIF7Q2M1P5 1343 aa8.08□□□□□ -1.12
SSX4B-201ENST00000595235 PROM2Q8N271 834 aa8.08□□□□□ -1.12
SSX4B-201ENST00000595235 DDX54Q8TDD1 881 aaKnown RBP8.08□□□□□ -1.12
SSX4B-201ENST00000595235 ANO8Q9HCE9 1232 aaPredicted RBP8.08□□□□□ -1.12
SSX4B-201ENST00000595235 LY75O60449 1722 aa8.08□□□□□ -1.12
SSX4B-201ENST00000595235 PPM1GO15355 546 aaPredicted RBP8.07□□□□□ -1.12
SSX4B-201ENST00000595235 TNNT2P45379 298 aaPredicted RBP8.07□□□□□ -1.12
SSX4B-201ENST00000595235 POLKQ9UBT6 870 aa8.07□□□□□ -1.12
SSX4B-201ENST00000595235 NSD2O96028 1365 aa8.07□□□□□ -1.12
SSX4B-201ENST00000595235 WASHC2AQ641Q2 1341 aa8.06□□□□□ -1.12
SSX4B-201ENST00000595235 TUBGCP6Q96RT7 1819 aa8.06□□□□□ -1.12
SSX4B-201ENST00000595235 POLA2Q14181 598 aa8.06□□□□□ -1.12
SSX4B-201ENST00000595235 TXNRD1Q16881 649 aa8.06□□□□□ -1.12
SSX4B-201ENST00000595235 NBPF14Q5TI25 921 aa8.06□□□□□ -1.12
SSX4B-201ENST00000595235 ZCRB1Q8TBF4 217 aaKnown RBP8.06□□□□□ -1.12
SSX4B-201ENST00000595235 ITGB4P16144 1822 aa8.06□□□□□ -1.12
SSX4B-201ENST00000595235 TATP17735 454 aaPredicted RBP8.05□□□□□ -1.12
SSX4B-201ENST00000595235 RAPGEF4Q8WZA2 1011 aa8.05□□□□□ -1.12
SSX4B-201ENST00000595235 ATF5Q9Y2D1 282 aaPredicted RBP8.05□□□□□ -1.12
SSX4B-201ENST00000595235 QSER1Q2KHR3 1735 aa8.05□□□□□ -1.12
SSX4B-201ENST00000595235 ATXN8OSP0DMR3 200 aa8.04□□□□□ -1.12
SSX4B-201ENST00000595235 EIF4A2Q14240 407 aaKnown RBP8.04□□□□□ -1.12
SSX4B-201ENST00000595235 EYA1Q99502 592 aa8.04□□□□□ -1.12
SSX4B-201ENST00000595235 PDGFDQ9GZP0 370 aaPredicted RBP8.04□□□□□ -1.12
SSX4B-201ENST00000595235 PCDH11XQ9BZA7 1347 aa8.03□□□□□ -1.12
SSX4B-201ENST00000595235 PCDH11YQ9BZA8 1340 aa8.03□□□□□ -1.12
SSX4B-201ENST00000595235 KAT6BQ8WYB5 2073 aa8.03□□□□□ -1.12
SSX4B-201ENST00000595235 C5P01031 1676 aa8.03□□□□□ -1.12
SSX4B-201ENST00000595235 CYP27B1O15528 508 aa8.03□□□□□ -1.12
SSX4B-201ENST00000595235 PRIM1P49642 420 aaKnown RBP8.03□□□□□ -1.12
SSX4B-201ENST00000595235 AMER1Q5JTC6 1135 aaPredicted RBP8.03□□□□□ -1.12
SSX4B-201ENST00000595235 SYTL4Q96C24 671 aaPredicted RBP8.03□□□□□ -1.12
SSX4B-201ENST00000595235 LRRC4BQ9NT99 713 aa8.03□□□□□ -1.12
SSX4B-201ENST00000595235 TAF1LQ8IZX4 1826 aa8.02□□□□□ -1.13
SSX4B-201ENST00000595235 MORC1Q86VD1 984 aa8.02□□□□□ -1.13
SSX4B-201ENST00000595235 KNSTRNQ9Y448 316 aa8.02□□□□□ -1.13
SSX4B-201ENST00000595235 IGSF1Q8N6C5 1336 aa8.02□□□□□ -1.13
SSX4B-201ENST00000595235 PER1O15534 1290 aaPredicted RBP8.01□□□□□ -1.13
SSX4B-201ENST00000595235 KCNQ4P56696 695 aa8.01□□□□□ -1.13
SSX4B-201ENST00000595235 SLC15A2Q16348 729 aa8.01□□□□□ -1.13
SSX4B-201ENST00000595235 ZNF827Q17R98 1081 aa8.01□□□□□ -1.13
SSX4B-201ENST00000595235 STK32BQ9NY57 414 aa8.01□□□□□ -1.13
SSX4B-201ENST00000595235 COL24A1Q17RW2 1714 aa8□□□□□ -1.13
SSX4B-201ENST00000595235 AKT1S1Q96B36 256 aa8□□□□□ -1.13
SSX4B-201ENST00000595235 ZBTB7AO95365 584 aa7.99□□□□□ -1.13
SSX4B-201ENST00000595235 NKX1-1Q15270 411 aaPredicted RBP7.99□□□□□ -1.13
SSX4B-201ENST00000595235 SLC27A3Q5K4L6 730 aa7.99□□□□□ -1.13
SSX4B-201ENST00000595235 CC2D1BQ5T0F9 858 aaKnown RBP7.99□□□□□ -1.13
SSX4B-201ENST00000595235 AEBP1Q8IUX7 1158 aa7.99□□□□□ -1.13
SSX4B-201ENST00000595235 SPON1Q9HCB6 807 aa7.99□□□□□ -1.13
SSX4B-201ENST00000595235 SPG7Q9UQ90 795 aa7.99□□□□□ -1.13
SSX4B-201ENST00000595235 COL3A1P02461 1466 aaPredicted RBP7.99□□□□□ -1.13
SSX4B-201ENST00000595235 VIRMAQ69YN4 1812 aaKnown RBP7.99□□□□□ -1.13
SSX4B-201ENST00000595235 PALLDQ8WX93 1383 aa7.98□□□□□ -1.13
SSX4B-201ENST00000595235 PLEKHG2Q9H7P9 1386 aa7.98□□□□□ -1.13
SSX4B-201ENST00000595235 C4BP0C0L5 1744 aa7.98□□□□□ -1.13
SSX4B-201ENST00000595235 PHKG2P15735 406 aa7.98□□□□□ -1.13
SSX4B-201ENST00000595235 IL13P35225 146 aa7.98□□□□□ -1.13
SSX4B-201ENST00000595235 MPRIPQ6WCQ1 1025 aa7.98□□□□□ -1.13
SSX4B-201ENST00000595235 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.98□□□□□ -1.13
SSX4B-201ENST00000595235 CCNL1Q9UK58 526 aaPredicted RBP7.98□□□□□ -1.13
SSX4B-201ENST00000595235 ZBTB12Q9Y330 459 aaPredicted RBP7.98□□□□□ -1.13
SSX4B-201ENST00000595235 KDRP35968 1356 aa7.97□□□□□ -1.13
SSX4B-201ENST00000595235 NPC1L1Q9UHC9 1359 aa7.97□□□□□ -1.13
SSX4B-201ENST00000595235 SCN11AQ9UI33 1791 aa7.97□□□□□ -1.13
SSX4B-201ENST00000595235 KDM6AO15550 1401 aaPredicted RBP7.97□□□□□ -1.13
SSX4B-201ENST00000595235 PTGER2P43116 358 aa7.97□□□□□ -1.13
SSX4B-201ENST00000595235 MTHFSP49914 203 aa7.97□□□□□ -1.13
SSX4B-201ENST00000595235 CNGB1Q14028 1251 aaPredicted RBP7.97□□□□□ -1.13
SSX4B-201ENST00000595235 IFNL2Q8IZJ0 200 aa7.97□□□□□ -1.13
SSX4B-201ENST00000595235 PIGBQ92521 554 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms