RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 DCCP43146 1447 aa19.42■□□□□ 0.7
PNKP-204ENST00000594661 NCOA3Q9Y6Q9 1424 aa19.42■□□□□ 0.7
PNKP-204ENST00000594661 ATF3P18847 181 aa19.42■□□□□ 0.7
PNKP-204ENST00000594661 SSH1Q8WYL5 1049 aa19.42■□□□□ 0.7
PNKP-204ENST00000594661 COG6Q9Y2V7 657 aa19.42■□□□□ 0.7
PNKP-204ENST00000594661 GNAI1P63096 354 aa19.42■□□□□ 0.7
PNKP-204ENST00000594661 SMC4Q9NTJ3 1288 aa19.42■□□□□ 0.7
PNKP-204ENST00000594661 RLBP1P12271 317 aa19.41■□□□□ 0.7
PNKP-204ENST00000594661 KRT28Q7Z3Y7 464 aa19.41■□□□□ 0.7
PNKP-204ENST00000594661 MBIPQ9NS73 344 aa19.41■□□□□ 0.7
PNKP-204ENST00000594661 LTV1Q96GA3 475 aaPredicted RBP19.4■□□□□ 0.7
PNKP-204ENST00000594661 SLIT3O75094 1523 aa19.4■□□□□ 0.7
PNKP-204ENST00000594661 CFAP44Q96MT7 982 aa19.4■□□□□ 0.7
PNKP-204ENST00000594661 PRDM4Q9UKN5 801 aa19.4■□□□□ 0.7
PNKP-204ENST00000594661 KCNH5Q8NCM2 988 aa19.39■□□□□ 0.69
PNKP-204ENST00000594661 XIRP1Q702N8 1843 aaKnown RBP19.39■□□□□ 0.69
PNKP-204ENST00000594661 MTHFSDQ2M296 383 aaKnown RBP19.39■□□□□ 0.69
PNKP-204ENST00000594661 LMOD2Q6P5Q4 547 aa19.39■□□□□ 0.69
PNKP-204ENST00000594661 IP6K1Q92551 441 aa19.39■□□□□ 0.69
PNKP-204ENST00000594661 PDCL3Q9H2J4 239 aa19.39■□□□□ 0.69
PNKP-204ENST00000594661 PHRF1Q9P1Y6 1649 aaKnown RBP19.38■□□□□ 0.69
PNKP-204ENST00000594661 FGD1P98174 961 aa19.38■□□□□ 0.69
PNKP-204ENST00000594661 MCM10Q7L590 875 aa19.38■□□□□ 0.69
PNKP-204ENST00000594661 CLUAP1Q96AJ1 413 aa19.38■□□□□ 0.69
PNKP-204ENST00000594661 ZKSCAN2Q63HK3 967 aa19.37■□□□□ 0.69
PNKP-204ENST00000594661 ZBTB7CA1YPR0 619 aa19.37■□□□□ 0.69
PNKP-204ENST00000594661 TSPYL6Q8N831 410 aa19.37■□□□□ 0.69
PNKP-204ENST00000594661 DDX17Q92841 729 aaKnown RBP19.37■□□□□ 0.69
PNKP-204ENST00000594661 USP19O94966 1318 aa19.36■□□□□ 0.69
PNKP-204ENST00000594661 GCP02774 474 aa19.36■□□□□ 0.69
PNKP-204ENST00000594661 ALS2Q96Q42 1657 aa19.36■□□□□ 0.69
PNKP-204ENST00000594661 CADPS2Q86UW7 1296 aa19.36■□□□□ 0.69
PNKP-204ENST00000594661 MSH6P52701 1360 aa19.35■□□□□ 0.69
PNKP-204ENST00000594661 FAM161AQ3B820 660 aa19.35■□□□□ 0.69
PNKP-204ENST00000594661 USHBP1Q8N6Y0 703 aa19.35■□□□□ 0.69
PNKP-204ENST00000594661 VAMP4O75379 141 aa19.34■□□□□ 0.69
PNKP-204ENST00000594661 TPM2P07951 284 aa19.34■□□□□ 0.69
PNKP-204ENST00000594661 ALDH1L2Q3SY69 923 aa19.34■□□□□ 0.69
PNKP-204ENST00000594661 FSD2A1L4K1 749 aa19.34■□□□□ 0.69
PNKP-204ENST00000594661 IGHDP01880 384 aa19.34■□□□□ 0.69
PNKP-204ENST00000594661 TRIM27P14373 513 aa19.34■□□□□ 0.69
PNKP-204ENST00000594661 NOB1Q9ULX3 412 aaKnown RBP19.34■□□□□ 0.69
PNKP-204ENST00000594661 VIRMAQ69YN4 1812 aaKnown RBP19.33■□□□□ 0.69
PNKP-204ENST00000594661 ELL2O00472 640 aaPredicted RBP19.33■□□□□ 0.69
PNKP-204ENST00000594661 C8orf34Q49A92 452 aa19.33■□□□□ 0.69
PNKP-204ENST00000594661 ARHGEF25Q86VW2 580 aa19.33■□□□□ 0.69
PNKP-204ENST00000594661 CRB1P82279 1406 aa19.33■□□□□ 0.69
PNKP-204ENST00000594661 XRCC6P12956 609 aaKnown RBP eCLIP19.33■□□□□ 0.68
PNKP-204ENST00000594661 DZIP1LQ8IYY4 767 aaKnown RBP19.33■□□□□ 0.68
PNKP-204ENST00000594661 C8orf58Q8NAV2 365 aa19.33■□□□□ 0.68
PNKP-204ENST00000594661 A0A0U1RQG5 324 aaPredicted RBP19.32■□□□□ 0.68
PNKP-204ENST00000594661 GAS2L2Q8NHY3 880 aa19.32■□□□□ 0.68
PNKP-204ENST00000594661 ZNF428Q96B54 188 aa19.32■□□□□ 0.68
PNKP-204ENST00000594661 ZNF335Q9H4Z2 1342 aaPredicted RBP19.32■□□□□ 0.68
PNKP-204ENST00000594661 MED1Q15648 1581 aaPredicted RBP19.32■□□□□ 0.68
PNKP-204ENST00000594661 RGPD2P0DJD1 1756 aa19.32■□□□□ 0.68
PNKP-204ENST00000594661 TWISTNBQ3B726 338 aaPredicted RBP19.31■□□□□ 0.68
PNKP-204ENST00000594661 NBPF6Q5VWK0 638 aa19.31■□□□□ 0.68
PNKP-204ENST00000594661 ATF7IPQ6VMQ6 1270 aa19.31■□□□□ 0.68
PNKP-204ENST00000594661 FTSJ3Q8IY81 847 aaKnown RBP19.31■□□□□ 0.68
PNKP-204ENST00000594661 NBPF4Q96M43 638 aa19.31■□□□□ 0.68
PNKP-204ENST00000594661 KIF16BQ96L93 1317 aa19.31■□□□□ 0.68
PNKP-204ENST00000594661 CHL1O00533 1208 aa19.31■□□□□ 0.68
PNKP-204ENST00000594661 RGS3P49796 1198 aa19.31■□□□□ 0.68
PNKP-204ENST00000594661 MVPQ14764 893 aaKnown RBP19.31■□□□□ 0.68
PNKP-204ENST00000594661 RTF1Q92541 710 aaKnown RBP19.29■□□□□ 0.68
PNKP-204ENST00000594661 BRPF1P55201 1214 aaPredicted RBP19.28■□□□□ 0.68
PNKP-204ENST00000594661 MRPL50Q8N5N7 158 aaKnown RBP19.28■□□□□ 0.68
PNKP-204ENST00000594661 LRRC59Q96AG4 307 aaKnown RBP19.28■□□□□ 0.68
PNKP-204ENST00000594661 NPHP3Q7Z494 1330 aa19.28■□□□□ 0.68
PNKP-204ENST00000594661 LRRC37A3O60309 1634 aa19.28■□□□□ 0.68
PNKP-204ENST00000594661 KRT24Q2M2I5 525 aa19.28■□□□□ 0.68
PNKP-204ENST00000594661 PXDNQ92626 1479 aa19.28■□□□□ 0.68
PNKP-204ENST00000594661 GOLGA6L3A6NEY3 463 aa19.27■□□□□ 0.67
PNKP-204ENST00000594661 AXIN2Q9Y2T1 843 aa19.27■□□□□ 0.67
PNKP-204ENST00000594661 IPO8O15397 1037 aaKnown RBP19.26■□□□□ 0.67
PNKP-204ENST00000594661 MIS18AQ9NYP9 233 aa19.26■□□□□ 0.67
PNKP-204ENST00000594661 PCDHB15Q9Y5E8 787 aa19.26■□□□□ 0.67
PNKP-204ENST00000594661 TNS3Q68CZ2 1445 aa19.26■□□□□ 0.67
PNKP-204ENST00000594661 MAP3K5Q99683 1374 aa19.26■□□□□ 0.67
PNKP-204ENST00000594661 GNAT3A8MTJ3 354 aa19.25■□□□□ 0.67
PNKP-204ENST00000594661 TMEM57Q8N5G2 664 aa19.25■□□□□ 0.67
PNKP-204ENST00000594661 HTATSF1O43719 755 aaKnown RBP19.25■□□□□ 0.67
PNKP-204ENST00000594661 ZC3H6P61129 1189 aaKnown RBP19.25■□□□□ 0.67
PNKP-204ENST00000594661 BRINP3Q76B58 766 aa19.25■□□□□ 0.67
PNKP-204ENST00000594661 ITPRIPQ8IWB1 547 aa19.25■□□□□ 0.67
PNKP-204ENST00000594661 ANKRD24Q8TF21 1146 aa19.25■□□□□ 0.67
PNKP-204ENST00000594661 RGPD5Q99666 1765 aa19.24■□□□□ 0.67
PNKP-204ENST00000594661 KIAA0232Q92628 1395 aa19.24■□□□□ 0.67
PNKP-204ENST00000594661 NCAPD2Q15021 1401 aa19.24■□□□□ 0.67
PNKP-204ENST00000594661 TSPYL4Q9UJ04 414 aa19.22■□□□□ 0.67
PNKP-204ENST00000594661 CAMTA1Q9Y6Y1 1673 aa19.22■□□□□ 0.67
PNKP-204ENST00000594661 IL17REQ8NFR9 667 aa19.22■□□□□ 0.67
PNKP-204ENST00000594661 CABLES1Q8TDN4 633 aa19.22■□□□□ 0.67
PNKP-204ENST00000594661 DDX19BQ9UMR2 479 aa19.22■□□□□ 0.67
PNKP-204ENST00000594661 SPATA31A3Q5VYP0 1347 aa19.21■□□□□ 0.67
PNKP-204ENST00000594661 ESPNB1AK53 854 aa19.21■□□□□ 0.67
PNKP-204ENST00000594661 CRYBG1Q9Y4K1 1723 aa19.21■□□□□ 0.67
PNKP-204ENST00000594661 PDE4CQ08493 712 aa19.21■□□□□ 0.67
PNKP-204ENST00000594661 ARHGAP45Q92619 1136 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms