RNA–Protein interactions for RNA: ENST00000594387.1

IRF3-208, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-208ENST00000594387 POLKQ9UBT6 870 aa23.69■■□□□ 1.38
IRF3-208ENST00000594387 NUP188Q5SRE5 1749 aa23.68■■□□□ 1.38
IRF3-208ENST00000594387 PSDA5PKW4 1024 aaPredicted RBP23.68■■□□□ 1.38
IRF3-208ENST00000594387 R3HDM1Q15032 1099 aaKnown RBP23.66■■□□□ 1.38
IRF3-208ENST00000594387 BTAF1O14981 1849 aa23.65■■□□□ 1.38
IRF3-208ENST00000594387 MEGF6O75095 1541 aa23.64■■□□□ 1.37
IRF3-208ENST00000594387 KCNQ2O43526 872 aa23.63■■□□□ 1.37
IRF3-208ENST00000594387 PTF1AQ7RTS3 328 aa23.63■■□□□ 1.37
IRF3-208ENST00000594387 SHANK3Q9BYB0 1731 aa23.63■■□□□ 1.37
IRF3-208ENST00000594387 SYTL4Q96C24 671 aaPredicted RBP23.62■■□□□ 1.37
IRF3-208ENST00000594387 DOT1LQ8TEK3 1739 aa23.61■■□□□ 1.37
IRF3-208ENST00000594387 PCDH11XQ9BZA7 1347 aa23.6■■□□□ 1.37
IRF3-208ENST00000594387 PCDH11YQ9BZA8 1340 aa23.6■■□□□ 1.37
IRF3-208ENST00000594387 SPG7Q9UQ90 795 aa23.6■■□□□ 1.37
IRF3-208ENST00000594387 TXNRD1Q16881 649 aa23.59■■□□□ 1.37
IRF3-208ENST00000594387 EYA1Q99502 592 aa23.59■■□□□ 1.37
IRF3-208ENST00000594387 EIF4A2Q14240 407 aaKnown RBP23.58■■□□□ 1.37
IRF3-208ENST00000594387 AMER1Q5JTC6 1135 aaPredicted RBP23.58■■□□□ 1.37
IRF3-208ENST00000594387 CC2D1BQ5T0F9 858 aaKnown RBP23.57■■□□□ 1.36
IRF3-208ENST00000594387 PRIM1P49642 420 aaKnown RBP23.56■■□□□ 1.36
IRF3-208ENST00000594387 PKD1L3Q7Z443 1732 aa23.56■■□□□ 1.36
IRF3-208ENST00000594387 STK32BQ9NY57 414 aa23.55■■□□□ 1.36
IRF3-208ENST00000594387 PER1O15534 1290 aaPredicted RBP23.54■■□□□ 1.36
IRF3-208ENST00000594387 LRP5O75197 1615 aa23.53■■□□□ 1.36
IRF3-208ENST00000594387 CNGB1Q14028 1251 aaPredicted RBP23.53■■□□□ 1.36
IRF3-208ENST00000594387 PROM2Q8N271 834 aa23.52■■□□□ 1.36
IRF3-208ENST00000594387 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.52■■□□□ 1.36
IRF3-208ENST00000594387 ITGB4P16144 1822 aa23.52■■□□□ 1.36
IRF3-208ENST00000594387 NCAPD2Q15021 1401 aa23.51■■□□□ 1.35
IRF3-208ENST00000594387 HMGB2P26583 209 aaKnown RBP23.5■■□□□ 1.35
IRF3-208ENST00000594387 MTHFSP49914 203 aa23.49■■□□□ 1.35
IRF3-208ENST00000594387 SLC27A3Q5K4L6 730 aa23.49■■□□□ 1.35
IRF3-208ENST00000594387 IGSF1Q8N6C5 1336 aa23.49■■□□□ 1.35
IRF3-208ENST00000594387 NPC1L1Q9UHC9 1359 aa23.49■■□□□ 1.35
IRF3-208ENST00000594387 IFNL2Q8IZJ0 200 aa23.48■■□□□ 1.35
IRF3-208ENST00000594387 CYP27B1O15528 508 aa23.47■■□□□ 1.35
IRF3-208ENST00000594387 PLEKHO1Q53GL0 409 aaPredicted RBP23.47■■□□□ 1.35
IRF3-208ENST00000594387 PLEKHG2Q9H7P9 1386 aa23.47■■□□□ 1.35
IRF3-208ENST00000594387 LY75O60449 1722 aa23.47■■□□□ 1.35
IRF3-208ENST00000594387 SLC15A2Q16348 729 aa23.46■■□□□ 1.35
IRF3-208ENST00000594387 MPRIPQ6WCQ1 1025 aa23.46■■□□□ 1.35
IRF3-208ENST00000594387 AMOTQ4VCS5 1084 aa23.45■■□□□ 1.34
IRF3-208ENST00000594387 SPON1Q9HCB6 807 aa23.44■■□□□ 1.34
IRF3-208ENST00000594387 ANO8Q9HCE9 1232 aaPredicted RBP23.44■■□□□ 1.34
IRF3-208ENST00000594387 HSP90AB1P08238 724 aaKnown RBP23.43■■□□□ 1.34
IRF3-208ENST00000594387 NKX1-1Q15270 411 aaPredicted RBP23.43■■□□□ 1.34
IRF3-208ENST00000594387 SULT6B1Q6IMI4 303 aa23.43■■□□□ 1.34
IRF3-208ENST00000594387 DIAPH1O60610 1272 aaKnown RBP23.42■■□□□ 1.34
IRF3-208ENST00000594387 PHKG2P15735 406 aa23.42■■□□□ 1.34
IRF3-208ENST00000594387 IL13P35225 146 aa23.42■■□□□ 1.34
IRF3-208ENST00000594387 SMARCC1Q92922 1105 aaPredicted RBP23.42■■□□□ 1.34
IRF3-208ENST00000594387 CCNL1Q9UK58 526 aaPredicted RBP23.42■■□□□ 1.34
IRF3-208ENST00000594387 TOGARAM1Q9Y4F4 1720 aa23.41■■□□□ 1.34
IRF3-208ENST00000594387 C1orf141Q5JVX7 400 aa23.4■■□□□ 1.34
IRF3-208ENST00000594387 CFAP53Q96M91 514 aa23.4■■□□□ 1.34
IRF3-208ENST00000594387 TMOD3Q9NYL9 352 aa23.4■■□□□ 1.34
IRF3-208ENST00000594387 PPP1R1BQ9UD71 204 aaPredicted RBP23.4■■□□□ 1.34
IRF3-208ENST00000594387 ZNF530Q6P9A1 599 aaPredicted RBP23.39■■□□□ 1.33
IRF3-208ENST00000594387 LRRC4BQ9NT99 713 aa23.39■■□□□ 1.33
IRF3-208ENST00000594387 CASZ1Q86V15 1759 aa23.38■■□□□ 1.33
IRF3-208ENST00000594387 AEBP1Q8IUX7 1158 aa23.37■■□□□ 1.33
IRF3-208ENST00000594387 PAPPAQ13219 1627 aa23.37■■□□□ 1.33
IRF3-208ENST00000594387 QSER1Q2KHR3 1735 aa23.36■■□□□ 1.33
IRF3-208ENST00000594387 DCAF5Q96JK2 942 aa23.36■■□□□ 1.33
IRF3-208ENST00000594387 TFCP2L1Q9NZI6 479 aa23.36■■□□□ 1.33
IRF3-208ENST00000594387 PIGBQ92521 554 aa23.35■■□□□ 1.33
IRF3-208ENST00000594387 PALLDQ8WX93 1383 aa23.35■■□□□ 1.33
IRF3-208ENST00000594387 TAF1LQ8IZX4 1826 aa23.35■■□□□ 1.33
IRF3-208ENST00000594387 C5P01031 1676 aa23.35■■□□□ 1.33
IRF3-208ENST00000594387 KCNQ4P56696 695 aa23.34■■□□□ 1.33
IRF3-208ENST00000594387 KDRP35968 1356 aa23.34■■□□□ 1.33
IRF3-208ENST00000594387 VIRMAQ69YN4 1812 aaKnown RBP23.33■■□□□ 1.33
IRF3-208ENST00000594387 ERVV-2B6SEH9 535 aa23.33■■□□□ 1.33
IRF3-208ENST00000594387 U2SURPO15042 1029 aaKnown RBP23.33■■□□□ 1.33
IRF3-208ENST00000594387 ZBTB7AO95365 584 aa23.33■■□□□ 1.33
IRF3-208ENST00000594387 HMOX1P09601 288 aa23.33■■□□□ 1.33
IRF3-208ENST00000594387 AKT1S1Q96B36 256 aa23.32■■□□□ 1.32
IRF3-208ENST00000594387 MTFR1LQ9H019 292 aa23.32■■□□□ 1.32
IRF3-208ENST00000594387 CABP4P57796 275 aa23.31■■□□□ 1.32
IRF3-208ENST00000594387 ZNF827Q17R98 1081 aa23.31■■□□□ 1.32
IRF3-208ENST00000594387 NUDCQ9Y266 331 aa23.31■■□□□ 1.32
IRF3-208ENST00000594387 ATF5Q9Y2D1 282 aaPredicted RBP23.31■■□□□ 1.32
IRF3-208ENST00000594387 SCN11AQ9UI33 1791 aa23.3■■□□□ 1.32
IRF3-208ENST00000594387 ZEB1P37275 1124 aaPredicted RBP23.3■■□□□ 1.32
IRF3-208ENST00000594387 PDGFDQ9GZP0 370 aaPredicted RBP23.3■■□□□ 1.32
IRF3-208ENST00000594387 TUBGCP6Q96RT7 1819 aa23.3■■□□□ 1.32
IRF3-208ENST00000594387 MSH5O43196 834 aa23.29■■□□□ 1.32
IRF3-208ENST00000594387 SLC16A10Q8TF71 515 aa23.29■■□□□ 1.32
IRF3-208ENST00000594387 AKAP4Q5JQC9 854 aa23.28■■□□□ 1.32
IRF3-208ENST00000594387 PPP2R1AP30153 589 aa23.27■■□□□ 1.32
IRF3-208ENST00000594387 DCAF8L1A6NGE4 600 aa23.26■■□□□ 1.31
IRF3-208ENST00000594387 ASAP1Q9ULH1 1129 aa23.26■■□□□ 1.31
IRF3-208ENST00000594387 LOC102724428A0A0B4J2F2 783 aa23.25■■□□□ 1.31
IRF3-208ENST00000594387 ATP6V1AP38606 617 aa23.25■■□□□ 1.31
IRF3-208ENST00000594387 SIK1P57059 783 aa23.25■■□□□ 1.31
IRF3-208ENST00000594387 FLAD1Q8NFF5 587 aa23.25■■□□□ 1.31
IRF3-208ENST00000594387 AK7Q96M32 723 aa23.25■■□□□ 1.31
IRF3-208ENST00000594387 COL3A1P02461 1466 aaPredicted RBP23.24■■□□□ 1.31
IRF3-208ENST00000594387 C4BP0C0L5 1744 aa23.23■■□□□ 1.31
IRF3-208ENST00000594387 POLD1P28340 1107 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms