RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 PLEKHO1Q53GL0 409 aaPredicted RBP19.72■□□□□ 0.75
VRK3-207ENST00000594092 RTF1Q92541 710 aaKnown RBP19.72■□□□□ 0.75
VRK3-207ENST00000594092 MAP3K5Q99683 1374 aa19.72■□□□□ 0.75
VRK3-207ENST00000594092 GNAI1P63096 354 aa19.72■□□□□ 0.75
VRK3-207ENST00000594092 LAS1LQ9Y4W2 734 aaKnown RBP19.72■□□□□ 0.75
VRK3-207ENST00000594092 TOM1L2Q6ZVM7 507 aa19.71■□□□□ 0.75
VRK3-207ENST00000594092 RAPGEF4Q8WZA2 1011 aa19.71■□□□□ 0.75
VRK3-207ENST00000594092 CFAP44Q96MT7 982 aa19.7■□□□□ 0.74
VRK3-207ENST00000594092 STRN4Q9NRL3 753 aa19.7■□□□□ 0.74
VRK3-207ENST00000594092 BTG4Q9NY30 223 aa19.7■□□□□ 0.74
VRK3-207ENST00000594092 CRB1P82279 1406 aa19.7■□□□□ 0.74
VRK3-207ENST00000594092 MEGF6O75095 1541 aa19.7■□□□□ 0.74
VRK3-207ENST00000594092 EVA1CP58658 441 aa19.69■□□□□ 0.74
VRK3-207ENST00000594092 IRX6P78412 446 aaPredicted RBP19.69■□□□□ 0.74
VRK3-207ENST00000594092 ERICH6BQ5W0A0 696 aa19.69■□□□□ 0.74
VRK3-207ENST00000594092 ZNF530Q6P9A1 599 aaPredicted RBP19.69■□□□□ 0.74
VRK3-207ENST00000594092 LARP1Q6PKG0 1096 aaKnown RBP19.69■□□□□ 0.74
VRK3-207ENST00000594092 TATP17735 454 aaPredicted RBP19.69■□□□□ 0.74
VRK3-207ENST00000594092 RRP1P56182 461 aaKnown RBP19.69■□□□□ 0.74
VRK3-207ENST00000594092 EXOSC9Q06265 439 aaKnown RBP19.69■□□□□ 0.74
VRK3-207ENST00000594092 CARD10Q9BWT7 1032 aa19.69■□□□□ 0.74
VRK3-207ENST00000594092 JCADQ9P266 1359 aa19.69■□□□□ 0.74
VRK3-207ENST00000594092 PLEKHG2Q9H7P9 1386 aa19.68■□□□□ 0.74
VRK3-207ENST00000594092 ADAMTS2O95450 1211 aa19.68■□□□□ 0.74
VRK3-207ENST00000594092 MBIPQ9NS73 344 aa19.68■□□□□ 0.74
VRK3-207ENST00000594092 NUTM2BA6NNL0 878 aaPredicted RBP19.67■□□□□ 0.74
VRK3-207ENST00000594092 NUTM2EB1AL46 878 aaPredicted RBP19.67■□□□□ 0.74
VRK3-207ENST00000594092 AKAP4Q5JQC9 854 aa19.67■□□□□ 0.74
VRK3-207ENST00000594092 NUTM2AQ8IVF1 878 aaPredicted RBP19.67■□□□□ 0.74
VRK3-207ENST00000594092 LRRC37A3O60309 1634 aa19.67■□□□□ 0.74
VRK3-207ENST00000594092 IL17REQ8NFR9 667 aa19.67■□□□□ 0.74
VRK3-207ENST00000594092 CHL1O00533 1208 aa19.66■□□□□ 0.74
VRK3-207ENST00000594092 CT47B1P0C2W7 299 aaPredicted RBP19.66■□□□□ 0.74
VRK3-207ENST00000594092 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.65■□□□□ 0.741e-7■■□□□ 12.1
VRK3-207ENST00000594092 CEMIPQ8WUJ3 1361 aa19.64■□□□□ 0.73
VRK3-207ENST00000594092 OVOS2A0A0G2JMS6 1433 aa19.64■□□□□ 0.73
VRK3-207ENST00000594092 C1orf141Q5JVX7 400 aa19.64■□□□□ 0.73
VRK3-207ENST00000594092 SPG7Q9UQ90 795 aa19.64■□□□□ 0.73
VRK3-207ENST00000594092 PLCH1Q4KWH8 1693 aa19.63■□□□□ 0.73
VRK3-207ENST00000594092 BCAR3O75815 825 aa19.63■□□□□ 0.73
VRK3-207ENST00000594092 RARSP54136 660 aaKnown RBP19.63■□□□□ 0.73
VRK3-207ENST00000594092 PKD1L3Q7Z443 1732 aa19.63■□□□□ 0.73
VRK3-207ENST00000594092 LGR6Q9HBX8 967 aa19.62■□□□□ 0.73
VRK3-207ENST00000594092 PARP4Q9UKK3 1724 aaKnown RBP19.62■□□□□ 0.73
VRK3-207ENST00000594092 PLIN1O60240 522 aa19.62■□□□□ 0.73
VRK3-207ENST00000594092 HSPA1LP34931 641 aa19.62■□□□□ 0.73
VRK3-207ENST00000594092 MPRIPQ6WCQ1 1025 aa19.61■□□□□ 0.73
VRK3-207ENST00000594092 IL2RBP14784 551 aa19.6■□□□□ 0.73
VRK3-207ENST00000594092 MIS18AQ9NYP9 233 aa19.6■□□□□ 0.73
VRK3-207ENST00000594092 RNMTO43148 476 aaKnown RBP19.6■□□□□ 0.73
VRK3-207ENST00000594092 PHKG2P15735 406 aa19.6■□□□□ 0.73
VRK3-207ENST00000594092 NRAPQ86VF7 1730 aa19.6■□□□□ 0.73
VRK3-207ENST00000594092 TSPYL4Q9UJ04 414 aa19.6■□□□□ 0.73
VRK3-207ENST00000594092 TAF7Q15545 349 aaPredicted RBP19.59■□□□□ 0.73
VRK3-207ENST00000594092 TSPYL6Q8N831 410 aa19.59■□□□□ 0.73
VRK3-207ENST00000594092 USP35Q9P2H5 1018 aa19.59■□□□□ 0.73
VRK3-207ENST00000594092 SLIT2O94813 1529 aa19.58■□□□□ 0.73
VRK3-207ENST00000594092 SPATA31A6Q5VVP1 1343 aa19.58■□□□□ 0.73
VRK3-207ENST00000594092 IFNL2Q8IZJ0 200 aa19.58■□□□□ 0.73
VRK3-207ENST00000594092 C8orf58Q8NAV2 365 aa19.58■□□□□ 0.73
VRK3-207ENST00000594092 ADAMTS7Q9UKP4 1686 aa19.58■□□□□ 0.73
VRK3-207ENST00000594092 VIRMAQ69YN4 1812 aaKnown RBP19.58■□□□□ 0.72
VRK3-207ENST00000594092 CYP27B1O15528 508 aa19.58■□□□□ 0.72
VRK3-207ENST00000594092 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.58■□□□□ 0.72
VRK3-207ENST00000594092 BABAM1Q9NWV8 329 aa19.58■□□□□ 0.72
VRK3-207ENST00000594092 NWD2Q9ULI1 1742 aa19.57■□□□□ 0.72
VRK3-207ENST00000594092 VAMP4O75379 141 aa19.57■□□□□ 0.72
VRK3-207ENST00000594092 ZCRB1Q8TBF4 217 aaKnown RBP19.57■□□□□ 0.72
VRK3-207ENST00000594092 TWISTNBQ3B726 338 aaPredicted RBP19.56■□□□□ 0.72
VRK3-207ENST00000594092 ZNF428Q96B54 188 aa19.56■□□□□ 0.72
VRK3-207ENST00000594092 BCL2L13Q9BXK5 485 aa19.56■□□□□ 0.72
VRK3-207ENST00000594092 ELL2O00472 640 aaPredicted RBP19.55■□□□□ 0.72
VRK3-207ENST00000594092 TEFQ10587 303 aa19.55■□□□□ 0.72
VRK3-207ENST00000594092 SSH1Q8WYL5 1049 aa19.55■□□□□ 0.72
VRK3-207ENST00000594092 PPP4R2Q9NY27 417 aa19.55■□□□□ 0.72
VRK3-207ENST00000594092 KDM6AO15550 1401 aaPredicted RBP19.55■□□□□ 0.72
VRK3-207ENST00000594092 LRP6O75581 1613 aa19.55■□□□□ 0.72
VRK3-207ENST00000594092 KRT24Q2M2I5 525 aa19.55■□□□□ 0.72
VRK3-207ENST00000594092 DISP2A7MBM2 1401 aa19.55■□□□□ 0.72
VRK3-207ENST00000594092 PCDH11XQ9BZA7 1347 aa19.54■□□□□ 0.72
VRK3-207ENST00000594092 PCDH11YQ9BZA8 1340 aa19.54■□□□□ 0.72
VRK3-207ENST00000594092 SCN11AQ9UI33 1791 aa19.54■□□□□ 0.72
VRK3-207ENST00000594092 ALDH1L2Q3SY69 923 aa19.53■□□□□ 0.72
VRK3-207ENST00000594092 C20orf194Q5TEA3 1177 aa19.53■□□□□ 0.72
VRK3-207ENST00000594092 C8orf37Q96NL8 207 aa19.53■□□□□ 0.72
VRK3-207ENST00000594092 SMC4Q9NTJ3 1288 aa19.53■□□□□ 0.72
VRK3-207ENST00000594092 SHANK3Q9BYB0 1731 aa19.53■□□□□ 0.72
VRK3-207ENST00000594092 HSP90AB1P08238 724 aaKnown RBP19.53■□□□□ 0.72
VRK3-207ENST00000594092 DCAF5Q96JK2 942 aa19.53■□□□□ 0.72
VRK3-207ENST00000594092 NGLY1Q96IV0 654 aa19.52■□□□□ 0.72
VRK3-207ENST00000594092 SIPA1L3O60292 1781 aaPredicted RBP19.52■□□□□ 0.71
VRK3-207ENST00000594092 SPATA31A1Q5TZJ5 1347 aa19.52■□□□□ 0.71
VRK3-207ENST00000594092 FRAT1Q92837 279 aaPredicted RBP19.51■□□□□ 0.71
VRK3-207ENST00000594092 KDM3BQ7LBC6 1761 aa19.51■□□□□ 0.71
VRK3-207ENST00000594092 BTBD11A6QL63 1104 aa19.51■□□□□ 0.71
VRK3-207ENST00000594092 UNC5CLQ8IV45 518 aa19.51■□□□□ 0.71
VRK3-207ENST00000594092 SPATA31A5Q5VU36 1347 aa19.5■□□□□ 0.71
VRK3-207ENST00000594092 SPATA31A7Q8IWB4 1347 aa19.5■□□□□ 0.71
VRK3-207ENST00000594092 BCL9LQ86UU0 1499 aa19.5■□□□□ 0.71
VRK3-207ENST00000594092 WNK3Q9BYP7 1800 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 108.7 ms