RNA–Protein interactions for RNA: ENST00000593827.1

COPE-204, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 3

Gene COPE, Length 601 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-204ENST00000593827 R3HDM1Q15032 1099 aaKnown RBP27.29■■□□□ 1.96
COPE-204ENST00000593827 EYA1Q99502 592 aa27.28■■□□□ 1.96
COPE-204ENST00000593827 SBF2Q86WG5 1849 aa27.27■■□□□ 1.96
COPE-204ENST00000593827 PER1O15534 1290 aaPredicted RBP27.27■■□□□ 1.96
COPE-204ENST00000593827 EIF4A2Q14240 407 aaKnown RBP27.27■■□□□ 1.96
COPE-204ENST00000593827 PTF1AQ7RTS3 328 aa27.27■■□□□ 1.96
COPE-204ENST00000593827 SPG7Q9UQ90 795 aa27.27■■□□□ 1.96
COPE-204ENST00000593827 RGPD3A6NKT7 1758 aaPredicted RBP27.27■■□□□ 1.96
COPE-204ENST00000593827 RGPD4Q7Z3J3 1758 aa27.27■■□□□ 1.96
COPE-204ENST00000593827 PLEKHG2Q9H7P9 1386 aa27.26■■□□□ 1.95
COPE-204ENST00000593827 NCAPD2Q15021 1401 aa27.25■■□□□ 1.95
COPE-204ENST00000593827 MAP2P11137 1827 aaKnown RBP27.25■■□□□ 1.95
COPE-204ENST00000593827 NPC1L1Q9UHC9 1359 aa27.25■■□□□ 1.95
COPE-204ENST00000593827 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.25■■□□□ 1.95
COPE-204ENST00000593827 TXNRD1Q16881 649 aa27.24■■□□□ 1.95
COPE-204ENST00000593827 SYTL4Q96C24 671 aaPredicted RBP27.24■■□□□ 1.95
COPE-204ENST00000593827 NHSQ6T4R5 1651 aa27.24■■□□□ 1.95
COPE-204ENST00000593827 RREB1Q92766 1687 aa27.23■■□□□ 1.95
COPE-204ENST00000593827 RGPD2P0DJD1 1756 aa27.22■■□□□ 1.95
COPE-204ENST00000593827 PRIM1P49642 420 aaKnown RBP27.21■■□□□ 1.95
COPE-204ENST00000593827 CC2D1BQ5T0F9 858 aaKnown RBP27.21■■□□□ 1.95
COPE-204ENST00000593827 HMGB2P26583 209 aaKnown RBP27.2■■□□□ 1.94
COPE-204ENST00000593827 IGSF1Q8N6C5 1336 aa27.19■■□□□ 1.94
COPE-204ENST00000593827 PROM2Q8N271 834 aa27.18■■□□□ 1.94
COPE-204ENST00000593827 STK32BQ9NY57 414 aa27.18■■□□□ 1.94
COPE-204ENST00000593827 NUP188Q5SRE5 1749 aa27.17■■□□□ 1.94
COPE-204ENST00000593827 SLC27A3Q5K4L6 730 aa27.17■■□□□ 1.94
COPE-204ENST00000593827 CYP27B1O15528 508 aa27.15■■□□□ 1.94
COPE-204ENST00000593827 MTHFSP49914 203 aa27.15■■□□□ 1.94
COPE-204ENST00000593827 AMOTQ4VCS5 1084 aa27.14■■□□□ 1.94
COPE-204ENST00000593827 IFNL2Q8IZJ0 200 aa27.14■■□□□ 1.94
COPE-204ENST00000593827 NKX1-1Q15270 411 aaPredicted RBP27.13■■□□□ 1.93
COPE-204ENST00000593827 PLEKHO1Q53GL0 409 aaPredicted RBP27.13■■□□□ 1.93
COPE-204ENST00000593827 HSP90AB1P08238 724 aaKnown RBP27.11■■□□□ 1.93
COPE-204ENST00000593827 IL13P35225 146 aa27.1■■□□□ 1.93
COPE-204ENST00000593827 SLC15A2Q16348 729 aa27.1■■□□□ 1.93
COPE-204ENST00000593827 ANO8Q9HCE9 1232 aaPredicted RBP27.1■■□□□ 1.93
COPE-204ENST00000593827 KAT6BQ8WYB5 2073 aa27.1■■□□□ 1.93
COPE-204ENST00000593827 SHANK3Q9BYB0 1731 aa27.1■■□□□ 1.93
COPE-204ENST00000593827 BTAF1O14981 1849 aa27.09■■□□□ 1.93
COPE-204ENST00000593827 PKD1L3Q7Z443 1732 aa27.08■■□□□ 1.93
COPE-204ENST00000593827 DIAPH1O60610 1272 aaKnown RBP27.08■■□□□ 1.93
COPE-204ENST00000593827 PHKG2P15735 406 aa27.08■■□□□ 1.93
COPE-204ENST00000593827 SMARCC1Q92922 1105 aaPredicted RBP27.08■■□□□ 1.93
COPE-204ENST00000593827 LRP5O75197 1615 aa27.08■■□□□ 1.93
COPE-204ENST00000593827 CNGB1Q14028 1251 aaPredicted RBP27.07■■□□□ 1.92
COPE-204ENST00000593827 SULT6B1Q6IMI4 303 aa27.07■■□□□ 1.92
COPE-204ENST00000593827 MPRIPQ6WCQ1 1025 aa27.07■■□□□ 1.92
COPE-204ENST00000593827 SPON1Q9HCB6 807 aa27.06■■□□□ 1.92
COPE-204ENST00000593827 DOT1LQ8TEK3 1739 aa27.06■■□□□ 1.92
COPE-204ENST00000593827 CFAP53Q96M91 514 aa27.05■■□□□ 1.92
COPE-204ENST00000593827 KDRP35968 1356 aa27.05■■□□□ 1.92
COPE-204ENST00000593827 C1orf141Q5JVX7 400 aa27.04■■□□□ 1.92
COPE-204ENST00000593827 TMOD3Q9NYL9 352 aa27.04■■□□□ 1.92
COPE-204ENST00000593827 CCNL1Q9UK58 526 aaPredicted RBP27.04■■□□□ 1.92
COPE-204ENST00000593827 ZNF530Q6P9A1 599 aaPredicted RBP27.03■■□□□ 1.92
COPE-204ENST00000593827 DCAF5Q96JK2 942 aa27.03■■□□□ 1.92
COPE-204ENST00000593827 LRRC4BQ9NT99 713 aa27.02■■□□□ 1.92
COPE-204ENST00000593827 AEBP1Q8IUX7 1158 aa27.01■■□□□ 1.91
COPE-204ENST00000593827 ERVV-2B6SEH9 535 aa27■■□□□ 1.91
COPE-204ENST00000593827 ZEB1P37275 1124 aaPredicted RBP27■■□□□ 1.91
COPE-204ENST00000593827 PALLDQ8WX93 1383 aa26.99■■□□□ 1.91
COPE-204ENST00000593827 PIGBQ92521 554 aa26.99■■□□□ 1.91
COPE-204ENST00000593827 PPP1R1BQ9UD71 204 aaPredicted RBP26.98■■□□□ 1.91
COPE-204ENST00000593827 TFCP2L1Q9NZI6 479 aa26.97■■□□□ 1.91
COPE-204ENST00000593827 NUDCQ9Y266 331 aa26.97■■□□□ 1.91
COPE-204ENST00000593827 AKT1S1Q96B36 256 aa26.96■■□□□ 1.91
COPE-204ENST00000593827 U2SURPO15042 1029 aaKnown RBP26.94■■□□□ 1.9
COPE-204ENST00000593827 HMOX1P09601 288 aa26.94■■□□□ 1.9
COPE-204ENST00000593827 ZNF827Q17R98 1081 aa26.94■■□□□ 1.9
COPE-204ENST00000593827 MTFR1LQ9H019 292 aa26.94■■□□□ 1.9
COPE-204ENST00000593827 PAPPAQ13219 1627 aa26.94■■□□□ 1.9
COPE-204ENST00000593827 CABP4P57796 275 aa26.93■■□□□ 1.9
COPE-204ENST00000593827 AKAP4Q5JQC9 854 aa26.93■■□□□ 1.9
COPE-204ENST00000593827 SLC16A10Q8TF71 515 aa26.92■■□□□ 1.9
COPE-204ENST00000593827 ZBTB7AO95365 584 aa26.91■■□□□ 1.9
COPE-204ENST00000593827 PPP2R1AP30153 589 aa26.91■■□□□ 1.9
COPE-204ENST00000593827 KCNQ4P56696 695 aa26.91■■□□□ 1.9
COPE-204ENST00000593827 LY75O60449 1722 aa26.9■■□□□ 1.9
COPE-204ENST00000593827 FLAD1Q8NFF5 587 aa26.89■■□□□ 1.9
COPE-204ENST00000593827 COL3A1P02461 1466 aaPredicted RBP26.88■■□□□ 1.89
COPE-204ENST00000593827 TOGARAM1Q9Y4F4 1720 aa26.88■■□□□ 1.89
COPE-204ENST00000593827 LOC102724428A0A0B4J2F2 783 aa26.88■■□□□ 1.89
COPE-204ENST00000593827 SIK1P57059 783 aa26.88■■□□□ 1.89
COPE-204ENST00000593827 PDGFDQ9GZP0 370 aaPredicted RBP26.87■■□□□ 1.89
COPE-204ENST00000593827 ASAP1Q9ULH1 1129 aa26.87■■□□□ 1.89
COPE-204ENST00000593827 CASZ1Q86V15 1759 aa26.86■■□□□ 1.89
COPE-204ENST00000593827 ATG3Q9NT62 314 aa26.86■■□□□ 1.89
COPE-204ENST00000593827 ATF5Q9Y2D1 282 aaPredicted RBP26.86■■□□□ 1.89
COPE-204ENST00000593827 KDM6AO15550 1401 aaPredicted RBP26.85■■□□□ 1.89
COPE-204ENST00000593827 GAS2L2Q8NHY3 880 aa26.85■■□□□ 1.89
COPE-204ENST00000593827 AK7Q96M32 723 aa26.85■■□□□ 1.89
COPE-204ENST00000593827 PNPLA7Q6ZV29 1317 aa26.84■■□□□ 1.89
COPE-204ENST00000593827 ITGB4P16144 1822 aa26.83■■□□□ 1.89
COPE-204ENST00000593827 ATP6V1AP38606 617 aa26.83■■□□□ 1.89
COPE-204ENST00000593827 MSH5O43196 834 aa26.82■■□□□ 1.88
COPE-204ENST00000593827 POLD1P28340 1107 aa26.82■■□□□ 1.88
COPE-204ENST00000593827 RALBP1Q15311 655 aa26.82■■□□□ 1.88
COPE-204ENST00000593827 MTHFSDQ2M296 383 aaKnown RBP26.82■■□□□ 1.88
COPE-204ENST00000593827 U2AF1L5P0DN76 240 aaPredicted RBP26.81■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms