RNA–Protein interactions for RNA: ENST00000593639.5

SRRM1-221, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-221ENST00000593639 ZNF526Q8TF50 670 aaPredicted RBP13.16□□□□□ -0.3
SRRM1-221ENST00000593639 SLC12A5Q9H2X9 1139 aa13.16□□□□□ -0.3
SRRM1-221ENST00000593639 ADCY9O60503 1353 aa13.16□□□□□ -0.3
SRRM1-221ENST00000593639 CD2APQ9Y5K6 639 aa13.15□□□□□ -0.3
SRRM1-221ENST00000593639 QSER1Q2KHR3 1735 aa13.14□□□□□ -0.31
SRRM1-221ENST00000593639 HDGFL2Q7Z4V5 671 aaPredicted RBP13.14□□□□□ -0.31
SRRM1-221ENST00000593639 ZCRB1Q8TBF4 217 aaKnown RBP13.14□□□□□ -0.31
SRRM1-221ENST00000593639 EDC4Q6P2E9 1401 aaKnown RBP13.13□□□□□ -0.31
SRRM1-221ENST00000593639 MON2Q7Z3U7 1717 aa13.13□□□□□ -0.31
SRRM1-221ENST00000593639 USP54Q70EL1 1684 aa13.13□□□□□ -0.31
SRRM1-221ENST00000593639 USP47Q96K76 1375 aa13.13□□□□□ -0.31
SRRM1-221ENST00000593639 SIN3AQ96ST3 1273 aa13.13□□□□□ -0.31
SRRM1-221ENST00000593639 MEGF6O75095 1541 aa13.13□□□□□ -0.31
SRRM1-221ENST00000593639 MAP3K19Q56UN5 1328 aa13.13□□□□□ -0.31
SRRM1-221ENST00000593639 A0A1W2PP64 1363 aa13.12□□□□□ -0.31
SRRM1-221ENST00000593639 FBLN1P23142 703 aa13.12□□□□□ -0.31
SRRM1-221ENST00000593639 HOXC9P31274 260 aa13.12□□□□□ -0.31
SRRM1-221ENST00000593639 TUBGCP6Q96RT7 1819 aa13.11□□□□□ -0.31
SRRM1-221ENST00000593639 WWC3Q9ULE0 1092 aa13.11□□□□□ -0.31
SRRM1-221ENST00000593639 AMIGO3Q86WK7 504 aa13.1□□□□□ -0.31
SRRM1-221ENST00000593639 TERF2IPQ9NYB0 399 aa13.1□□□□□ -0.31
SRRM1-221ENST00000593639 LTN1O94822 1766 aa13.09□□□□□ -0.31
SRRM1-221ENST00000593639 KIF3CO14782 793 aa13.09□□□□□ -0.31
SRRM1-221ENST00000593639 AMPHP49418 695 aa13.09□□□□□ -0.31
SRRM1-221ENST00000593639 NEUROD1Q13562 356 aa13.09□□□□□ -0.31
SRRM1-221ENST00000593639 KAT6BQ8WYB5 2073 aa13.09□□□□□ -0.31
SRRM1-221ENST00000593639 IGSF1Q8N6C5 1336 aa13.09□□□□□ -0.31
SRRM1-221ENST00000593639 LY75O60449 1722 aa13.08□□□□□ -0.32
SRRM1-221ENST00000593639 DOT1LQ8TEK3 1739 aa13.08□□□□□ -0.32
SRRM1-221ENST00000593639 NBPF6Q5VWK0 638 aa13.08□□□□□ -0.32
SRRM1-221ENST00000593639 SMIM5Q71RC9 77 aa13.08□□□□□ -0.32
SRRM1-221ENST00000593639 USHBP1Q8N6Y0 703 aa13.08□□□□□ -0.32
SRRM1-221ENST00000593639 FLAD1Q8NFF5 587 aa13.08□□□□□ -0.32
SRRM1-221ENST00000593639 NBPF4Q96M43 638 aa13.08□□□□□ -0.32
SRRM1-221ENST00000593639 COG3Q96JB2 828 aa13.07□□□□□ -0.32
SRRM1-221ENST00000593639 CARD11Q9BXL7 1154 aa13.07□□□□□ -0.32
SRRM1-221ENST00000593639 PALLDQ8WX93 1383 aa13.07□□□□□ -0.32
SRRM1-221ENST00000593639 FAM208AQ9UK61 1670 aaKnown RBP13.06□□□□□ -0.32
SRRM1-221ENST00000593639 PHF14O94880 888 aa13.05□□□□□ -0.32
SRRM1-221ENST00000593639 RRS1Q15050 365 aaKnown RBP13.05□□□□□ -0.32
SRRM1-221ENST00000593639 MPRIPQ6WCQ1 1025 aa13.05□□□□□ -0.32
SRRM1-221ENST00000593639 RAPGEF4Q8WZA2 1011 aa13.05□□□□□ -0.32
SRRM1-221ENST00000593639 CGNL1Q0VF96 1302 aa13.05□□□□□ -0.32
SRRM1-221ENST00000593639 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.04□□□□□ -0.32
SRRM1-221ENST00000593639 AK7Q96M32 723 aa13.04□□□□□ -0.32
SRRM1-221ENST00000593639 PUS7Q96PZ0 661 aaKnown RBP13.04□□□□□ -0.32
SRRM1-221ENST00000593639 APLP1P51693 650 aa13.03□□□□□ -0.32
SRRM1-221ENST00000593639 DNAJC5GQ8N7S2 189 aa13.03□□□□□ -0.32
SRRM1-221ENST00000593639 RTL1A6NKG5 1358 aa13.03□□□□□ -0.32
SRRM1-221ENST00000593639 CYP27B1O15528 508 aa13.02□□□□□ -0.33
SRRM1-221ENST00000593639 TATP17735 454 aaPredicted RBP13.02□□□□□ -0.33
SRRM1-221ENST00000593639 HMGB2P26583 209 aaKnown RBP13.02□□□□□ -0.33
SRRM1-221ENST00000593639 PCDH11XQ9BZA7 1347 aa13.02□□□□□ -0.33
SRRM1-221ENST00000593639 PCDH11YQ9BZA8 1340 aa13.02□□□□□ -0.33
SRRM1-221ENST00000593639 PCNTO95613 3336 aa13□□□□□ -0.33
SRRM1-221ENST00000593639 C5P01031 1676 aa13□□□□□ -0.33
SRRM1-221ENST00000593639 SSFA2P28290 1259 aa13□□□□□ -0.33
SRRM1-221ENST00000593639 HSP90AB2PQ58FF8 381 aa13□□□□□ -0.33
SRRM1-221ENST00000593639 LINC00116Q8NCU8 138 aa13□□□□□ -0.33
SRRM1-221ENST00000593639 PIGBQ92521 554 aa13□□□□□ -0.33
SRRM1-221ENST00000593639 SMARCC1Q92922 1105 aaPredicted RBP13□□□□□ -0.33
SRRM1-221ENST00000593639 TESK2Q96S53 571 aa13□□□□□ -0.33
SRRM1-221ENST00000593639 TOMM70O94826 608 aa12.99□□□□□ -0.33
SRRM1-221ENST00000593639 GGNBP2Q9H3C7 697 aa12.99□□□□□ -0.33
SRRM1-221ENST00000593639 SMG6Q86US8 1419 aaKnown RBP12.98□□□□□ -0.33
SRRM1-221ENST00000593639 LOC102724428A0A0B4J2F2 783 aa12.98□□□□□ -0.33
SRRM1-221ENST00000593639 FYB1O15117 783 aa12.98□□□□□ -0.33
SRRM1-221ENST00000593639 SIK1P57059 783 aa12.98□□□□□ -0.33
SRRM1-221ENST00000593639 C4BP0C0L5 1744 aa12.98□□□□□ -0.33
SRRM1-221ENST00000593639 TOGARAM1Q9Y4F4 1720 aa12.98□□□□□ -0.33
SRRM1-221ENST00000593639 PXDNLA1KZ92 1463 aa12.97□□□□□ -0.33
SRRM1-221ENST00000593639 INSRP06213 1382 aa12.97□□□□□ -0.33
SRRM1-221ENST00000593639 GNPATO15228 680 aa12.97□□□□□ -0.33
SRRM1-221ENST00000593639 MMP10P09238 476 aa12.97□□□□□ -0.33
SRRM1-221ENST00000593639 ITPK1Q13572 414 aa12.97□□□□□ -0.33
SRRM1-221ENST00000593639 NMRK2Q9NPI5 230 aa12.97□□□□□ -0.33
SRRM1-221ENST00000593639 CICQ96RK0 1608 aaPredicted RBP12.97□□□□□ -0.33
SRRM1-221ENST00000593639 RGPD2P0DJD1 1756 aa12.97□□□□□ -0.33
SRRM1-221ENST00000593639 NSD3Q9BZ95 1437 aa12.96□□□□□ -0.33
SRRM1-221ENST00000593639 ST20-MTHFSA0A0A6YYL1 179 aa12.96□□□□□ -0.33
SRRM1-221ENST00000593639 HTRA3P83110 453 aa12.96□□□□□ -0.33
SRRM1-221ENST00000593639 NKX1-1Q15270 411 aaPredicted RBP12.96□□□□□ -0.33
SRRM1-221ENST00000593639 BCS1LQ9Y276 419 aa12.96□□□□□ -0.33
SRRM1-221ENST00000593639 A0A0G2JLW4 131 aa12.95□□□□□ -0.34
SRRM1-221ENST00000593639 COL13A1Q5TAT6 717 aaPredicted RBP12.95□□□□□ -0.34
SRRM1-221ENST00000593639 ASAP1Q9ULH1 1129 aa12.95□□□□□ -0.34
SRRM1-221ENST00000593639 FLT4P35916 1363 aa12.94□□□□□ -0.34
SRRM1-221ENST00000593639 TGFB2P61812 414 aa12.94□□□□□ -0.34
SRRM1-221ENST00000593639 ARHGAP27Q6ZUM4 889 aa12.94□□□□□ -0.34
SRRM1-221ENST00000593639 ATP6V1AP38606 617 aa12.93□□□□□ -0.34
SRRM1-221ENST00000593639 TMOD3Q9NYL9 352 aa12.93□□□□□ -0.34
SRRM1-221ENST00000593639 TAF1LQ8IZX4 1826 aa12.92□□□□□ -0.34
SRRM1-221ENST00000593639 DPEP1P16444 411 aa12.92□□□□□ -0.34
SRRM1-221ENST00000593639 C10orf71Q711Q0 1435 aa12.92□□□□□ -0.34
SRRM1-221ENST00000593639 RBM46Q8TBY0 533 aaKnown RBP12.92□□□□□ -0.34
SRRM1-221ENST00000593639 KLRG1Q96E93 195 aa12.92□□□□□ -0.34
SRRM1-221ENST00000593639 ATG3Q9NT62 314 aa12.92□□□□□ -0.34
SRRM1-221ENST00000593639 KIF24Q5T7B8 1368 aa12.92□□□□□ -0.34
SRRM1-221ENST00000593639 UBR3Q6ZT12 1888 aa12.91□□□□□ -0.34
SRRM1-221ENST00000593639 FCHSD2O94868 740 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms