RNA–Protein interactions for RNA: ENST00000592905.5

ERCC1-217, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 882 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-217ENST00000592905 ZCRB1Q8TBF4 217 aaKnown RBP20.55■□□□□ 0.88
ERCC1-217ENST00000592905 ACSBG1Q96GR2 724 aa20.55■□□□□ 0.88
ERCC1-217ENST00000592905 DDX10Q13206 875 aaKnown RBP20.54■□□□□ 0.88
ERCC1-217ENST00000592905 KCNQ2O43526 872 aa20.52■□□□□ 0.88
ERCC1-217ENST00000592905 EZH2Q15910 746 aaKnown RBP20.52■□□□□ 0.88
ERCC1-217ENST00000592905 NCAPD2Q15021 1401 aa20.51■□□□□ 0.87
ERCC1-217ENST00000592905 IL13P35225 146 aa20.5■□□□□ 0.87
ERCC1-217ENST00000592905 BCL11BQ9C0K0 894 aaPredicted RBP20.5■□□□□ 0.87
ERCC1-217ENST00000592905 BCL9O00512 1426 aa20.5■□□□□ 0.87
ERCC1-217ENST00000592905 IGSF1Q8N6C5 1336 aa20.5■□□□□ 0.87
ERCC1-217ENST00000592905 AEBP1Q8IUX7 1158 aa20.49■□□□□ 0.87
ERCC1-217ENST00000592905 CAMKK2Q96RR4 588 aa20.49■□□□□ 0.87
ERCC1-217ENST00000592905 NHSQ6T4R5 1651 aa20.47■□□□□ 0.87
ERCC1-217ENST00000592905 PKD1L3Q7Z443 1732 aa20.47■□□□□ 0.87
ERCC1-217ENST00000592905 CYP27B1O15528 508 aa20.46■□□□□ 0.87
ERCC1-217ENST00000592905 PPP2R1AP30153 589 aa20.46■□□□□ 0.87
ERCC1-217ENST00000592905 SULT6B1Q6IMI4 303 aa20.46■□□□□ 0.87
ERCC1-217ENST00000592905 DOT1LQ8TEK3 1739 aa20.46■□□□□ 0.87
ERCC1-217ENST00000592905 DIAPH1O60610 1272 aaKnown RBP20.45■□□□□ 0.86
ERCC1-217ENST00000592905 SYTL4Q96C24 671 aaPredicted RBP20.45■□□□□ 0.86
ERCC1-217ENST00000592905 BTAF1O14981 1849 aa20.45■□□□□ 0.86
ERCC1-217ENST00000592905 PCDH11XQ9BZA7 1347 aa20.45■□□□□ 0.86
ERCC1-217ENST00000592905 PCDH11YQ9BZA8 1340 aa20.45■□□□□ 0.86
ERCC1-217ENST00000592905 PRIM1P49642 420 aaKnown RBP20.44■□□□□ 0.86
ERCC1-217ENST00000592905 SPG7Q9UQ90 795 aa20.44■□□□□ 0.86
ERCC1-217ENST00000592905 HMOX1P09601 288 aa20.43■□□□□ 0.86
ERCC1-217ENST00000592905 COL3A1P02461 1466 aaPredicted RBP20.42■□□□□ 0.86
ERCC1-217ENST00000592905 PLSCR1O15162 318 aa20.41■□□□□ 0.86
ERCC1-217ENST00000592905 RREB1Q92766 1687 aa20.41■□□□□ 0.86
ERCC1-217ENST00000592905 U2SURPO15042 1029 aaKnown RBP20.4■□□□□ 0.86
ERCC1-217ENST00000592905 NUP188Q5SRE5 1749 aa20.4■□□□□ 0.86
ERCC1-217ENST00000592905 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.4■□□□□ 0.86
ERCC1-217ENST00000592905 PSDA5PKW4 1024 aaPredicted RBP20.39■□□□□ 0.85
ERCC1-217ENST00000592905 PLEKHO1Q53GL0 409 aaPredicted RBP20.39■□□□□ 0.85
ERCC1-217ENST00000592905 PROM2Q8N271 834 aa20.39■□□□□ 0.85
ERCC1-217ENST00000592905 ITGB4P16144 1822 aa20.39■□□□□ 0.85
ERCC1-217ENST00000592905 PARD3Q8TEW0 1356 aa20.38■□□□□ 0.85
ERCC1-217ENST00000592905 IFNL2Q8IZJ0 200 aa20.38■□□□□ 0.85
ERCC1-217ENST00000592905 CFAP53Q96M91 514 aa20.38■□□□□ 0.85
ERCC1-217ENST00000592905 RGPD3A6NKT7 1758 aaPredicted RBP20.38■□□□□ 0.85
ERCC1-217ENST00000592905 RGPD4Q7Z3J3 1758 aa20.38■□□□□ 0.85
ERCC1-217ENST00000592905 TOGARAM1Q9Y4F4 1720 aa20.38■□□□□ 0.85
ERCC1-217ENST00000592905 KDRP35968 1356 aa20.37■□□□□ 0.85
ERCC1-217ENST00000592905 PHKG2P15735 406 aa20.37■□□□□ 0.85
ERCC1-217ENST00000592905 ZNF316A6NFI3 1004 aaPredicted RBP20.36■□□□□ 0.85
ERCC1-217ENST00000592905 TXNRD1Q16881 649 aa20.36■□□□□ 0.85
ERCC1-217ENST00000592905 ZNF530Q6P9A1 599 aaPredicted RBP20.36■□□□□ 0.85
ERCC1-217ENST00000592905 MPRIPQ6WCQ1 1025 aa20.36■□□□□ 0.85
ERCC1-217ENST00000592905 R3HDM1Q15032 1099 aaKnown RBP20.35■□□□□ 0.85
ERCC1-217ENST00000592905 NKX1-1Q15270 411 aaPredicted RBP20.35■□□□□ 0.85
ERCC1-217ENST00000592905 AMOTQ4VCS5 1084 aa20.34■□□□□ 0.85
ERCC1-217ENST00000592905 KCNQ4P56696 695 aa20.32■□□□□ 0.84
ERCC1-217ENST00000592905 RALBP1Q15311 655 aa20.31■□□□□ 0.84
ERCC1-217ENST00000592905 NBPF14Q5TI25 921 aa20.31■□□□□ 0.84
ERCC1-217ENST00000592905 U2AF1L5P0DN76 240 aaPredicted RBP20.3■□□□□ 0.84
ERCC1-217ENST00000592905 U2AF1Q01081 240 aaKnown RBP eCLIP20.3■□□□□ 0.84
ERCC1-217ENST00000592905 C1orf141Q5JVX7 400 aa20.3■□□□□ 0.84
ERCC1-217ENST00000592905 PIGBQ92521 554 aa20.3■□□□□ 0.84
ERCC1-217ENST00000592905 NUDCQ9Y266 331 aa20.3■□□□□ 0.84
ERCC1-217ENST00000592905 PLEKHG2Q9H7P9 1386 aa20.3■□□□□ 0.84
ERCC1-217ENST00000592905 MTHFSDQ2M296 383 aaKnown RBP20.29■□□□□ 0.84
ERCC1-217ENST00000592905 ANO8Q9HCE9 1232 aaPredicted RBP20.29■□□□□ 0.84
ERCC1-217ENST00000592905 LRRC4BQ9NT99 713 aa20.29■□□□□ 0.84
ERCC1-217ENST00000592905 VIRMAQ69YN4 1812 aaKnown RBP20.29■□□□□ 0.84
ERCC1-217ENST00000592905 LY75O60449 1722 aa20.28■□□□□ 0.84
ERCC1-217ENST00000592905 SRCAPQ6ZRS2 3230 aa20.28■□□□□ 0.84
ERCC1-217ENST00000592905 HSP90AB1P08238 724 aaKnown RBP20.27■□□□□ 0.84
ERCC1-217ENST00000592905 DCAF5Q96JK2 942 aa20.27■□□□□ 0.84
ERCC1-217ENST00000592905 TMOD3Q9NYL9 352 aa20.27■□□□□ 0.84
ERCC1-217ENST00000592905 KDM6AO15550 1401 aaPredicted RBP20.27■□□□□ 0.83
ERCC1-217ENST00000592905 PRKAR2BP31323 418 aa20.26■□□□□ 0.83
ERCC1-217ENST00000592905 PHACTR3Q96KR7 559 aa20.26■□□□□ 0.83
ERCC1-217ENST00000592905 RSPH6AQ9H0K4 717 aa20.26■□□□□ 0.83
ERCC1-217ENST00000592905 SCN11AQ9UI33 1791 aa20.26■□□□□ 0.83
ERCC1-217ENST00000592905 AKAP4Q5JQC9 854 aa20.25■□□□□ 0.83
ERCC1-217ENST00000592905 LGR6Q9HBX8 967 aa20.25■□□□□ 0.83
ERCC1-217ENST00000592905 ASAP1Q9ULH1 1129 aa20.25■□□□□ 0.83
ERCC1-217ENST00000592905 MYBBP1AQ9BQG0 1328 aaKnown RBP20.25■□□□□ 0.83
ERCC1-217ENST00000592905 ERVV-2B6SEH9 535 aa20.24■□□□□ 0.83
ERCC1-217ENST00000592905 PRKRIP1Q9H875 184 aaPredicted RBP20.24■□□□□ 0.83
ERCC1-217ENST00000592905 STK32BQ9NY57 414 aa20.24■□□□□ 0.83
ERCC1-217ENST00000592905 CCNL1Q9UK58 526 aaPredicted RBP20.24■□□□□ 0.83
ERCC1-217ENST00000592905 PALLDQ8WX93 1383 aa20.23■□□□□ 0.83
ERCC1-217ENST00000592905 CABP4P57796 275 aa20.23■□□□□ 0.83
ERCC1-217ENST00000592905 SLC15A2Q16348 729 aa20.22■□□□□ 0.83
ERCC1-217ENST00000592905 SLC27A3Q5K4L6 730 aa20.22■□□□□ 0.83
ERCC1-217ENST00000592905 NFATC2IPQ8NCF5 419 aa20.22■□□□□ 0.83
ERCC1-217ENST00000592905 PAPPAQ13219 1627 aa20.21■□□□□ 0.83
ERCC1-217ENST00000592905 FCHSD2O94868 740 aa20.21■□□□□ 0.83
ERCC1-217ENST00000592905 ZNF827Q17R98 1081 aa20.21■□□□□ 0.83
ERCC1-217ENST00000592905 SMARCC1Q92922 1105 aaPredicted RBP20.21■□□□□ 0.83
ERCC1-217ENST00000592905 PDGFDQ9GZP0 370 aaPredicted RBP20.21■□□□□ 0.83
ERCC1-217ENST00000592905 ATG3Q9NT62 314 aa20.21■□□□□ 0.83
ERCC1-217ENST00000592905 RNMTO43148 476 aaKnown RBP20.2■□□□□ 0.82
ERCC1-217ENST00000592905 TAF1LQ8IZX4 1826 aa20.19■□□□□ 0.82
ERCC1-217ENST00000592905 GAS2L2Q8NHY3 880 aa20.19■□□□□ 0.82
ERCC1-217ENST00000592905 AKT1S1Q96B36 256 aa20.17■□□□□ 0.82
ERCC1-217ENST00000592905 C5P01031 1676 aa20.16■□□□□ 0.82
ERCC1-217ENST00000592905 TUBGCP6Q96RT7 1819 aa20.16■□□□□ 0.82
ERCC1-217ENST00000592905 LOC102724428A0A0B4J2F2 783 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms