RNA–Protein interactions for RNA: ENST00000592771.5

RANBP3-229, Transcript of RAN binding protein 3, humanhuman

TSL 1 (best)

Gene RANBP3, Length 1,937 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-229ENST00000592771 SLIT3O75094 1523 aa18.09■□□□□ 0.49
RANBP3-229ENST00000592771 CHL1O00533 1208 aa18.08■□□□□ 0.49
RANBP3-229ENST00000592771 MRPL50Q8N5N7 158 aaKnown RBP18.08■□□□□ 0.49
RANBP3-229ENST00000592771 ORAI2Q96SN7 254 aa18.08■□□□□ 0.49
RANBP3-229ENST00000592771 MST1RQ04912 1400 aa18.08■□□□□ 0.48
RANBP3-229ENST00000592771 ARHGAP45Q92619 1136 aa18.08■□□□□ 0.48
RANBP3-229ENST00000592771 C19orf44Q9H6X5 657 aa18.08■□□□□ 0.48
RANBP3-229ENST00000592771 DDX19BQ9UMR2 479 aa18.08■□□□□ 0.48
RANBP3-229ENST00000592771 DCCP43146 1447 aa18.07■□□□□ 0.48
RANBP3-229ENST00000592771 LRRC37A3O60309 1634 aa18.07■□□□□ 0.48
RANBP3-229ENST00000592771 MTHFSDQ2M296 383 aaKnown RBP18.07■□□□□ 0.48
RANBP3-229ENST00000592771 TWISTNBQ3B726 338 aaPredicted RBP18.07■□□□□ 0.48
RANBP3-229ENST00000592771 C8orf58Q8NAV2 365 aa18.07■□□□□ 0.48
RANBP3-229ENST00000592771 KCNH5Q8NCM2 988 aa18.07■□□□□ 0.48
RANBP3-229ENST00000592771 IP6K1Q92551 441 aa18.07■□□□□ 0.48
RANBP3-229ENST00000592771 RWDD1Q9H446 243 aaPredicted RBP18.07■□□□□ 0.48
RANBP3-229ENST00000592771 KIAA0232Q92628 1395 aa18.06■□□□□ 0.48
RANBP3-229ENST00000592771 GSE1Q14687 1217 aa18.06■□□□□ 0.48
RANBP3-229ENST00000592771 GAS2L2Q8NHY3 880 aa18.06■□□□□ 0.48
RANBP3-229ENST00000592771 BECN1Q14457 450 aa18.05■□□□□ 0.48
RANBP3-229ENST00000592771 MCM10Q7L590 875 aa18.05■□□□□ 0.48
RANBP3-229ENST00000592771 TMEM57Q8N5G2 664 aa18.05■□□□□ 0.48
RANBP3-229ENST00000592771 USP19O94966 1318 aa18.04■□□□□ 0.48
RANBP3-229ENST00000592771 HTATSF1O43719 755 aaKnown RBP18.04■□□□□ 0.48
RANBP3-229ENST00000592771 ALS2Q96Q42 1657 aa18.03■□□□□ 0.48
RANBP3-229ENST00000592771 FOXO3O43524 673 aa18.03■□□□□ 0.48
RANBP3-229ENST00000592771 ITPRIPQ8IWB1 547 aa18.03■□□□□ 0.48
RANBP3-229ENST00000592771 TMEM94Q12767 1356 aa18.03■□□□□ 0.48
RANBP3-229ENST00000592771 ZBTB40Q9NUA8 1239 aa18.02■□□□□ 0.48
RANBP3-229ENST00000592771 ZNF335Q9H4Z2 1342 aaPredicted RBP18.02■□□□□ 0.47
RANBP3-229ENST00000592771 SLC4A3P48751 1232 aa18.02■□□□□ 0.47
RANBP3-229ENST00000592771 HAP1P54257 671 aaPredicted RBP18.02■□□□□ 0.47
RANBP3-229ENST00000592771 UPF2Q9HAU5 1272 aaKnown RBP18.02■□□□□ 0.47
RANBP3-229ENST00000592771 ABCC4O15439 1325 aa18.01■□□□□ 0.47
RANBP3-229ENST00000592771 ELL2O00472 640 aaPredicted RBP18.01■□□□□ 0.47
RANBP3-229ENST00000592771 HDAC1Q13547 482 aaPredicted RBP18.01■□□□□ 0.47
RANBP3-229ENST00000592771 MSH6P52701 1360 aa18.01■□□□□ 0.47
RANBP3-229ENST00000592771 NCAPD2Q15021 1401 aa18■□□□□ 0.47
RANBP3-229ENST00000592771 RTF1Q92541 710 aaKnown RBP18■□□□□ 0.47
RANBP3-229ENST00000592771 KRT28Q7Z3Y7 464 aa18■□□□□ 0.47
RANBP3-229ENST00000592771 ARHGEF25Q86VW2 580 aa18■□□□□ 0.47
RANBP3-229ENST00000592771 GCP02774 474 aa17.99■□□□□ 0.47
RANBP3-229ENST00000592771 CAMTA1Q9Y6Y1 1673 aa17.98■□□□□ 0.47
RANBP3-229ENST00000592771 RGPD2P0DJD1 1756 aa17.98■□□□□ 0.47
RANBP3-229ENST00000592771 MAP3K5Q99683 1374 aa17.98■□□□□ 0.47
RANBP3-229ENST00000592771 XPCQ01831 940 aaPredicted RBP17.98■□□□□ 0.47
RANBP3-229ENST00000592771 LTV1Q96GA3 475 aaPredicted RBP17.98■□□□□ 0.47
RANBP3-229ENST00000592771 PDZRN3Q9UPQ7 1066 aa17.98■□□□□ 0.47
RANBP3-229ENST00000592771 GNAT3A8MTJ3 354 aa17.97■□□□□ 0.47
RANBP3-229ENST00000592771 API5Q9BZZ5 524 aaKnown RBP17.97■□□□□ 0.47
RANBP3-229ENST00000592771 XIRP1Q702N8 1843 aaKnown RBP17.96■□□□□ 0.47
RANBP3-229ENST00000592771 ATF3P18847 181 aa17.96■□□□□ 0.47
RANBP3-229ENST00000592771 KRT24Q2M2I5 525 aa17.96■□□□□ 0.47
RANBP3-229ENST00000592771 NBPF6Q5VWK0 638 aa17.96■□□□□ 0.47
RANBP3-229ENST00000592771 NBPF4Q96M43 638 aa17.96■□□□□ 0.47
RANBP3-229ENST00000592771 CHMP4BQ9H444 224 aaKnown RBP17.96■□□□□ 0.47
RANBP3-229ENST00000592771 MED1Q15648 1581 aaPredicted RBP17.95■□□□□ 0.46
RANBP3-229ENST00000592771 RGS12O14924 1447 aa17.95■□□□□ 0.46
RANBP3-229ENST00000592771 ZBTB7BO15156 539 aaPredicted RBP17.95■□□□□ 0.46
RANBP3-229ENST00000592771 BABAM1Q9NWV8 329 aa17.95■□□□□ 0.46
RANBP3-229ENST00000592771 TBC1D32Q96NH3 1257 aa17.94■□□□□ 0.46
RANBP3-229ENST00000592771 CADPS2Q86UW7 1296 aa17.94■□□□□ 0.46
RANBP3-229ENST00000592771 SMC5Q8IY18 1101 aa17.94■□□□□ 0.46
RANBP3-229ENST00000592771 USHBP1Q8N6Y0 703 aa17.94■□□□□ 0.46
RANBP3-229ENST00000592771 TSPYL4Q9UJ04 414 aa17.94■□□□□ 0.46
RANBP3-229ENST00000592771 IL17REQ8NFR9 667 aa17.93■□□□□ 0.46
RANBP3-229ENST00000592771 LMO7Q8WWI1 1683 aa17.93■□□□□ 0.46
RANBP3-229ENST00000592771 SEC24BO95487 1268 aa17.92■□□□□ 0.46
RANBP3-229ENST00000592771 CEMIPQ8WUJ3 1361 aa17.92■□□□□ 0.46
RANBP3-229ENST00000592771 SOS1Q07889 1333 aaPredicted RBP17.92■□□□□ 0.46
RANBP3-229ENST00000592771 FRAT2O75474 233 aaPredicted RBP17.91■□□□□ 0.46
RANBP3-229ENST00000592771 MIS18AQ9NYP9 233 aa17.91■□□□□ 0.46
RANBP3-229ENST00000592771 PTPRCP08575 1304 aa17.91■□□□□ 0.46
RANBP3-229ENST00000592771 CACNA1FO60840 1977 aa17.9■□□□□ 0.46
RANBP3-229ENST00000592771 INTS3Q68E01 1043 aaKnown RBP17.9■□□□□ 0.46
RANBP3-229ENST00000592771 PXDNQ92626 1479 aa17.9■□□□□ 0.46
RANBP3-229ENST00000592771 RGPD5Q99666 1765 aa17.89■□□□□ 0.46
RANBP3-229ENST00000592771 CRYBG1Q9Y4K1 1723 aa17.89■□□□□ 0.45
RANBP3-229ENST00000592771 FAM208AQ9UK61 1670 aaKnown RBP17.89■□□□□ 0.45
RANBP3-229ENST00000592771 NPHP3Q7Z494 1330 aa17.89■□□□□ 0.45
RANBP3-229ENST00000592771 COL18A1P39060 1754 aa17.88■□□□□ 0.45
RANBP3-229ENST00000592771 TAF7Q15545 349 aaPredicted RBP17.88■□□□□ 0.45
RANBP3-229ENST00000592771 LMOD2Q6P5Q4 547 aa17.88■□□□□ 0.45
RANBP3-229ENST00000592771 LRRC59Q96AG4 307 aaKnown RBP17.88■□□□□ 0.45
RANBP3-229ENST00000592771 ABCC6O95255 1503 aa17.88■□□□□ 0.45
RANBP3-229ENST00000592771 TNS3Q68CZ2 1445 aa17.88■□□□□ 0.45
RANBP3-229ENST00000592771 ANKRD24Q8TF21 1146 aa17.88■□□□□ 0.45
RANBP3-229ENST00000592771 ZBTB7CA1YPR0 619 aa17.87■□□□□ 0.45
RANBP3-229ENST00000592771 AXIN2Q9Y2T1 843 aa17.87■□□□□ 0.45
RANBP3-229ENST00000592771 KDM3BQ7LBC6 1761 aa17.87■□□□□ 0.45
RANBP3-229ENST00000592771 OVOS2A0A0G2JMS6 1433 aa17.86■□□□□ 0.45
RANBP3-229ENST00000592771 AMOTQ4VCS5 1084 aa17.86■□□□□ 0.45
RANBP3-229ENST00000592771 ANTXR1Q9H6X2 564 aa17.86■□□□□ 0.45
RANBP3-229ENST00000592771 ERBB3P21860 1342 aa17.85■□□□□ 0.45
RANBP3-229ENST00000592771 PLEKHO1Q53GL0 409 aaPredicted RBP17.85■□□□□ 0.45
RANBP3-229ENST00000592771 AKAP4Q5JQC9 854 aa17.85■□□□□ 0.45
RANBP3-229ENST00000592771 SLC4A2P04920 1241 aa17.84■□□□□ 0.45
RANBP3-229ENST00000592771 ADAMTS7Q9UKP4 1686 aa17.84■□□□□ 0.45
RANBP3-229ENST00000592771 IL27Q8NEV9 243 aa17.84■□□□□ 0.45
RANBP3-229ENST00000592771 DDX17Q92841 729 aaKnown RBP17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms