RNA–Protein interactions for RNA: ENST00000592410.5

ERCC1-215, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, human

TSL 2

Gene ERCC1, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ERCC1-215	ENST00000592410	TNNT2	P45379	298 aa	Predicted RBP	7.44	□□□□□ -1.22
ERCC1-215	ENST00000592410	PPP4R3B	Q5MIZ7	849 aa		7.44	□□□□□ -1.22
ERCC1-215	ENST00000592410	RUNDC1	Q96C34	613 aa		7.44	□□□□□ -1.22
ERCC1-215	ENST00000592410	SLC26A8	Q96RN1	970 aa		7.44	□□□□□ -1.22
ERCC1-215	ENST00000592410	CRISPLD2	Q9H0B8	497 aa		7.44	□□□□□ -1.22
ERCC1-215	ENST00000592410	RCAN3	Q9UKA8	241 aa		7.44	□□□□□ -1.22
ERCC1-215	ENST00000592410	AMOTL2	Q9Y2J4	779 aa		7.44	□□□□□ -1.22
ERCC1-215	ENST00000592410	SALL2	Q9Y467	1007 aa	Predicted RBP	7.44	□□□□□ -1.22
ERCC1-215	ENST00000592410	CHD2	O14647	1828 aa	Known RBP	7.43	□□□□□ -1.22
ERCC1-215	ENST00000592410	TK2	O00142	265 aa		7.43	□□□□□ -1.22
ERCC1-215	ENST00000592410	NEFM	P07197	916 aa		7.43	□□□□□ -1.22
ERCC1-215	ENST00000592410	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	7.43	□□□□□ -1.22
ERCC1-215	ENST00000592410	OXER1	Q8TDS5	423 aa		7.43	□□□□□ -1.22
ERCC1-215	ENST00000592410	GGNBP2	Q9H3C7	697 aa		7.43	□□□□□ -1.22
ERCC1-215	ENST00000592410	MAP2	P11137	1827 aa	Known RBP	7.43	□□□□□ -1.22
ERCC1-215	ENST00000592410	ANKAR	Q7Z5J8	1434 aa		7.43	□□□□□ -1.22
ERCC1-215	ENST00000592410	PTPRU	Q92729	1446 aa		7.43	□□□□□ -1.22
ERCC1-215	ENST00000592410		E9PSI1	815 aa		7.42	□□□□□ -1.22
ERCC1-215	ENST00000592410	APAF1	O14727	1248 aa		7.42	□□□□□ -1.22
ERCC1-215	ENST00000592410	PSEN2	P49810	448 aa		7.42	□□□□□ -1.22
ERCC1-215	ENST00000592410	DMRTA1	Q5VZB9	504 aa		7.42	□□□□□ -1.22
ERCC1-215	ENST00000592410	COG3	Q96JB2	828 aa		7.42	□□□□□ -1.22
ERCC1-215	ENST00000592410	ZNF521	Q96K83	1311 aa		7.42	□□□□□ -1.22
ERCC1-215	ENST00000592410	AATK	Q6ZMQ8	1374 aa		7.42	□□□□□ -1.22
ERCC1-215	ENST00000592410	NRK	Q7Z2Y5	1582 aa		7.42	□□□□□ -1.22
ERCC1-215	ENST00000592410	FMN2	Q9NZ56	1722 aa		7.41	□□□□□ -1.22
ERCC1-215	ENST00000592410	PLEKHG3	A1L390	1219 aa		7.41	□□□□□ -1.22
ERCC1-215	ENST00000592410	DIAPH1	O60610	1272 aa	Known RBP	7.41	□□□□□ -1.22
ERCC1-215	ENST00000592410	U2AF1L5	P0DN76	240 aa	Predicted RBP	7.41	□□□□□ -1.22
ERCC1-215	ENST00000592410	RRP1	P56182	461 aa	Known RBP	7.41	□□□□□ -1.22
ERCC1-215	ENST00000592410	U2AF1	Q01081	240 aa	Known RBP eCLIP	7.41	□□□□□ -1.22
ERCC1-215	ENST00000592410	CCDC27	Q2M243	656 aa		7.41	□□□□□ -1.22
ERCC1-215	ENST00000592410	PPP1R15B	Q5SWA1	713 aa		7.41	□□□□□ -1.22
ERCC1-215	ENST00000592410	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	7.41	□□□□□ -1.22
ERCC1-215	ENST00000592410	CCDC146	Q8IYE0	955 aa		7.41	□□□□□ -1.22
ERCC1-215	ENST00000592410	MAPK8IP3	Q9UPT6	1336 aa		7.41	□□□□□ -1.22
ERCC1-215	ENST00000592410	COL3A1	P02461	1466 aa	Predicted RBP	7.41	□□□□□ -1.22
ERCC1-215	ENST00000592410	NKTR	P30414	1462 aa	Known RBP	7.41	□□□□□ -1.22
ERCC1-215	ENST00000592410	HR	O43593	1189 aa		7.4	□□□□□ -1.22
ERCC1-215	ENST00000592410	PDE4A	P27815	886 aa		7.4	□□□□□ -1.22
ERCC1-215	ENST00000592410	IRX6	P78412	446 aa	Predicted RBP	7.4	□□□□□ -1.22
ERCC1-215	ENST00000592410	SLFN5	Q08AF3	891 aa		7.4	□□□□□ -1.22
ERCC1-215	ENST00000592410	WDR63	Q8IWG1	891 aa		7.4	□□□□□ -1.22
ERCC1-215	ENST00000592410	UPF1	Q92900	1129 aa	Known RBP eCLIP	7.4	□□□□□ -1.22
ERCC1-215	ENST00000592410	TTC21A	Q8NDW8	1320 aa		7.4	□□□□□ -1.22
ERCC1-215	ENST00000592410	PNPLA6	Q8IY17	1366 aa		7.4	□□□□□ -1.22
ERCC1-215	ENST00000592410	IQSEC2	Q5JU85	1478 aa		7.4	□□□□□ -1.22
ERCC1-215	ENST00000592410	CDK12	Q9NYV4	1490 aa	Predicted RBP	7.4	□□□□□ -1.22
ERCC1-215	ENST00000592410	NPHP4	O75161	1426 aa	Predicted RBP	7.39	□□□□□ -1.23
ERCC1-215	ENST00000592410	USP6	P35125	1406 aa		7.39	□□□□□ -1.23
ERCC1-215	ENST00000592410	PRR36	Q9H6K5	1346 aa		7.39	□□□□□ -1.23
ERCC1-215	ENST00000592410	NCKAP5L	Q9HCH0	1330 aa		7.39	□□□□□ -1.23
ERCC1-215	ENST00000592410	U2SURP	O15042	1029 aa	Known RBP	7.39	□□□□□ -1.23
ERCC1-215	ENST00000592410	GTPBP6	O43824	516 aa	Predicted RBP	7.39	□□□□□ -1.23
ERCC1-215	ENST00000592410	DUSP27	Q5VZP5	1158 aa		7.39	□□□□□ -1.23
ERCC1-215	ENST00000592410	CDCA7L	Q96GN5	454 aa		7.39	□□□□□ -1.23
ERCC1-215	ENST00000592410	HCST	Q9UBK5	93 aa		7.39	□□□□□ -1.23
ERCC1-215	ENST00000592410	RGPD8	O14715	1765 aa	Predicted RBP	7.38	□□□□□ -1.23
ERCC1-215	ENST00000592410	NALCN	Q8IZF0	1738 aa		7.38	□□□□□ -1.23
ERCC1-215	ENST00000592410	ACE	P12821	1306 aa		7.38	□□□□□ -1.23
ERCC1-215	ENST00000592410	TTC21B	Q7Z4L5	1316 aa		7.38	□□□□□ -1.23
ERCC1-215	ENST00000592410	SENP3-EIF4A1	A0A087X0R7	540 aa		7.38	□□□□□ -1.23
ERCC1-215	ENST00000592410	WWC1	Q8IX03	1113 aa		7.38	□□□□□ -1.23
ERCC1-215	ENST00000592410	TRMT2A	Q8IZ69	625 aa	Known RBP	7.38	□□□□□ -1.23
ERCC1-215	ENST00000592410	TCP11L2	Q8N4U5	519 aa		7.38	□□□□□ -1.23
ERCC1-215	ENST00000592410	NGDN	Q8NEJ9	315 aa	Known RBP	7.38	□□□□□ -1.23
ERCC1-215	ENST00000592410	MYH16	Q9H6N6	1097 aa		7.38	□□□□□ -1.23
ERCC1-215	ENST00000592410	NWD1	Q149M9	1564 aa		7.37	□□□□□ -1.23
ERCC1-215	ENST00000592410	LRRC7	Q96NW7	1537 aa		7.37	□□□□□ -1.23
ERCC1-215	ENST00000592410	OVOS2	A0A0J9YW53	1432 aa		7.37	□□□□□ -1.23
ERCC1-215	ENST00000592410	OVOS2	Q6IE36	1432 aa		7.37	□□□□□ -1.23
ERCC1-215	ENST00000592410	FCHSD2	O94868	740 aa		7.37	□□□□□ -1.23
ERCC1-215	ENST00000592410	CALD1	Q05682	793 aa	Known RBP	7.37	□□□□□ -1.23
ERCC1-215	ENST00000592410	NME9	Q86XW9	330 aa		7.37	□□□□□ -1.23
ERCC1-215	ENST00000592410	CCDC136	Q96JN2	1154 aa		7.37	□□□□□ -1.23
ERCC1-215	ENST00000592410	KCNK17	Q96T54	332 aa		7.37	□□□□□ -1.23
ERCC1-215	ENST00000592410	POLK	Q9UBT6	870 aa		7.37	□□□□□ -1.23
ERCC1-215	ENST00000592410	USP54	Q70EL1	1684 aa		7.37	□□□□□ -1.23
ERCC1-215	ENST00000592410	IL16	Q14005	1332 aa		7.36	□□□□□ -1.23
ERCC1-215	ENST00000592410	CT47B1	P0C2W7	299 aa	Predicted RBP	7.36	□□□□□ -1.23
ERCC1-215	ENST00000592410	KCNA6	P17658	529 aa		7.36	□□□□□ -1.23
ERCC1-215	ENST00000592410	ZNF454	Q8N9F8	522 aa		7.36	□□□□□ -1.23
ERCC1-215	ENST00000592410	SSH2	Q76I76	1423 aa		7.35	□□□□□ -1.23
ERCC1-215	ENST00000592410	ADGRL3	Q9HAR2	1447 aa		7.35	□□□□□ -1.23
ERCC1-215	ENST00000592410	KIF24	Q5T7B8	1368 aa		7.35	□□□□□ -1.23
ERCC1-215	ENST00000592410	USP31	Q70CQ4	1352 aa		7.35	□□□□□ -1.23
ERCC1-215	ENST00000592410	PPM1G	O15355	546 aa	Predicted RBP	7.35	□□□□□ -1.23
ERCC1-215	ENST00000592410	TMPO	P42166	694 aa	Known RBP	7.35	□□□□□ -1.23
ERCC1-215	ENST00000592410	LMOD3	Q0VAK6	560 aa		7.35	□□□□□ -1.23
ERCC1-215	ENST00000592410	NUTM2F	A1L443	756 aa		7.34	□□□□□ -1.23
ERCC1-215	ENST00000592410	FOSB	P53539	338 aa		7.34	□□□□□ -1.23
ERCC1-215	ENST00000592410	NEUROD2	Q15784	382 aa		7.34	□□□□□ -1.23
ERCC1-215	ENST00000592410	PLEKHF1	Q96S99	279 aa		7.34	□□□□□ -1.23
ERCC1-215	ENST00000592410	LARP6	Q9BRS8	491 aa	Known RBP	7.34	□□□□□ -1.23
ERCC1-215	ENST00000592410	BCL2L12	Q9HB09	334 aa		7.34	□□□□□ -1.23
ERCC1-215	ENST00000592410	ANO8	Q9HCE9	1232 aa	Predicted RBP	7.34	□□□□□ -1.23
ERCC1-215	ENST00000592410	KIF1A	Q12756	1690 aa		7.34	□□□□□ -1.23
ERCC1-215	ENST00000592410	PIK3C2A	O00443	1686 aa		7.33	□□□□□ -1.24
ERCC1-215	ENST00000592410	MS4A1	P11836	297 aa		7.33	□□□□□ -1.24
ERCC1-215	ENST00000592410	CANX	P27824	592 aa	Known RBP	7.33	□□□□□ -1.24

Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms