RNA–Protein interactions for RNA: ENST00000592395.5

TCF3-216, Transcript of transcription factor 3, humanhuman

TSL 5

Gene TCF3, Length 996 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-216ENST00000592395 SF3B2Q13435 895 aaKnown RBP25.26■■□□□ 1.63
TCF3-216ENST00000592395 MARCH10Q8NA82 808 aaPredicted RBP25.26■■□□□ 1.63
TCF3-216ENST00000592395 TNS1Q9HBL0 1735 aaKnown RBP25.26■■□□□ 1.63
TCF3-216ENST00000592395 SBF2Q86WG5 1849 aa25.25■■□□□ 1.63
TCF3-216ENST00000592395 BCL9O00512 1426 aa25.24■■□□□ 1.63
TCF3-216ENST00000592395 MTHFSP49914 203 aa25.24■■□□□ 1.63
TCF3-216ENST00000592395 RAPGEF4Q8WZA2 1011 aa25.24■■□□□ 1.63
TCF3-216ENST00000592395 EYA1Q99502 592 aa25.24■■□□□ 1.63
TCF3-216ENST00000592395 SHANK3Q9BYB0 1731 aa25.23■■□□□ 1.63
TCF3-216ENST00000592395 TRIM37O94972 964 aa25.21■■□□□ 1.63
TCF3-216ENST00000592395 TATP17735 454 aaPredicted RBP25.21■■□□□ 1.63
TCF3-216ENST00000592395 DDX10Q13206 875 aaKnown RBP25.21■■□□□ 1.63
TCF3-216ENST00000592395 IGSF1Q8N6C5 1336 aa25.2■■□□□ 1.62
TCF3-216ENST00000592395 ZCRB1Q8TBF4 217 aaKnown RBP25.19■■□□□ 1.62
TCF3-216ENST00000592395 PKD1L3Q7Z443 1732 aa25.18■■□□□ 1.62
TCF3-216ENST00000592395 BAG6P46379 1132 aa25.17■■□□□ 1.62
TCF3-216ENST00000592395 IL13P35225 146 aa25.16■■□□□ 1.62
TCF3-216ENST00000592395 DDX54Q8TDD1 881 aaKnown RBP25.16■■□□□ 1.62
TCF3-216ENST00000592395 DEFB132Q7Z7B7 95 aa25.15■■□□□ 1.62
TCF3-216ENST00000592395 PLEKHG2Q9H7P9 1386 aa25.15■■□□□ 1.62
TCF3-216ENST00000592395 NHSQ6T4R5 1651 aa25.14■■□□□ 1.62
TCF3-216ENST00000592395 PARD3Q8TEW0 1356 aa25.14■■□□□ 1.61
TCF3-216ENST00000592395 COL3A1P02461 1466 aaPredicted RBP25.14■■□□□ 1.61
TCF3-216ENST00000592395 PPP2R1AP30153 589 aa25.13■■□□□ 1.61
TCF3-216ENST00000592395 PCDH11XQ9BZA7 1347 aa25.12■■□□□ 1.61
TCF3-216ENST00000592395 PCDH11YQ9BZA8 1340 aa25.12■■□□□ 1.61
TCF3-216ENST00000592395 DIAPH1O60610 1272 aaKnown RBP25.12■■□□□ 1.61
TCF3-216ENST00000592395 BCL11BQ9C0K0 894 aaPredicted RBP25.12■■□□□ 1.61
TCF3-216ENST00000592395 APBA3O96018 575 aa25.11■■□□□ 1.61
TCF3-216ENST00000592395 KDRP35968 1356 aa25.1■■□□□ 1.61
TCF3-216ENST00000592395 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.1■■□□□ 1.61
TCF3-216ENST00000592395 SPG7Q9UQ90 795 aa25.1■■□□□ 1.61
TCF3-216ENST00000592395 DOT1LQ8TEK3 1739 aa25.09■■□□□ 1.61
TCF3-216ENST00000592395 RGPD3A6NKT7 1758 aaPredicted RBP25.09■■□□□ 1.61
TCF3-216ENST00000592395 RGPD4Q7Z3J3 1758 aa25.09■■□□□ 1.61
TCF3-216ENST00000592395 ZNF316A6NFI3 1004 aaPredicted RBP25.09■■□□□ 1.61
TCF3-216ENST00000592395 EN1Q05925 392 aaPredicted RBP25.09■■□□□ 1.61
TCF3-216ENST00000592395 CFAP53Q96M91 514 aa25.09■■□□□ 1.61
TCF3-216ENST00000592395 SULT6B1Q6IMI4 303 aa25.08■■□□□ 1.61
TCF3-216ENST00000592395 KAT6BQ8WYB5 2073 aa25.08■■□□□ 1.6
TCF3-216ENST00000592395 AEBP1Q8IUX7 1158 aa25.07■■□□□ 1.6
TCF3-216ENST00000592395 ACSBG1Q96GR2 724 aa25.07■■□□□ 1.6
TCF3-216ENST00000592395 CYP27B1O15528 508 aa25.06■■□□□ 1.6
TCF3-216ENST00000592395 PTF1AQ7RTS3 328 aa25.06■■□□□ 1.6
TCF3-216ENST00000592395 POTEDQ86YR6 584 aa25.06■■□□□ 1.6
TCF3-216ENST00000592395 KCNQ2O43526 872 aa25.05■■□□□ 1.6
TCF3-216ENST00000592395 RALBP1Q15311 655 aa25.05■■□□□ 1.6
TCF3-216ENST00000592395 BTAF1O14981 1849 aa25.05■■□□□ 1.6
TCF3-216ENST00000592395 CAMKK2Q96RR4 588 aa25.04■■□□□ 1.6
TCF3-216ENST00000592395 RREB1Q92766 1687 aa25.04■■□□□ 1.6
TCF3-216ENST00000592395 EZH2Q15910 746 aaKnown RBP25.03■■□□□ 1.6
TCF3-216ENST00000592395 PLSCR1O15162 318 aa25.02■■□□□ 1.6
TCF3-216ENST00000592395 AMOTQ4VCS5 1084 aa25.02■■□□□ 1.6
TCF3-216ENST00000592395 PLEKHO1Q53GL0 409 aaPredicted RBP25.02■■□□□ 1.6
TCF3-216ENST00000592395 HMOX1P09601 288 aa25.01■■□□□ 1.59
TCF3-216ENST00000592395 IFNL2Q8IZJ0 200 aa25.01■■□□□ 1.59
TCF3-216ENST00000592395 U2SURPO15042 1029 aaKnown RBP25■■□□□ 1.59
TCF3-216ENST00000592395 NKX1-1Q15270 411 aaPredicted RBP25■■□□□ 1.59
TCF3-216ENST00000592395 TOGARAM1Q9Y4F4 1720 aa25■■□□□ 1.59
TCF3-216ENST00000592395 PHKG2P15735 406 aa24.99■■□□□ 1.59
TCF3-216ENST00000592395 PRIM1P49642 420 aaKnown RBP24.99■■□□□ 1.59
TCF3-216ENST00000592395 NUP188Q5SRE5 1749 aa24.99■■□□□ 1.59
TCF3-216ENST00000592395 NUDCQ9Y266 331 aa24.99■■□□□ 1.59
TCF3-216ENST00000592395 U3KPZ7 1027 aaPredicted RBP24.99■■□□□ 1.59
TCF3-216ENST00000592395 SYTL4Q96C24 671 aaPredicted RBP24.98■■□□□ 1.59
TCF3-216ENST00000592395 ITGB4P16144 1822 aa24.97■■□□□ 1.59
TCF3-216ENST00000592395 ZNF530Q6P9A1 599 aaPredicted RBP24.96■■□□□ 1.59
TCF3-216ENST00000592395 MYBBP1AQ9BQG0 1328 aaKnown RBP24.95■■□□□ 1.58
TCF3-216ENST00000592395 ATXN8OSP0DMR3 200 aa24.95■■□□□ 1.58
TCF3-216ENST00000592395 HSP90AB1P08238 724 aaKnown RBP24.94■■□□□ 1.58
TCF3-216ENST00000592395 C1orf141Q5JVX7 400 aa24.93■■□□□ 1.58
TCF3-216ENST00000592395 PRKRIP1Q9H875 184 aaPredicted RBP24.92■■□□□ 1.58
TCF3-216ENST00000592395 U2AF1L5P0DN76 240 aaPredicted RBP24.91■■□□□ 1.58
TCF3-216ENST00000592395 U2AF1Q01081 240 aaKnown RBP eCLIP24.91■■□□□ 1.58
TCF3-216ENST00000592395 LY75O60449 1722 aa24.9■■□□□ 1.58
TCF3-216ENST00000592395 TXNRD1Q16881 649 aa24.9■■□□□ 1.58
TCF3-216ENST00000592395 DCAF5Q96JK2 942 aa24.9■■□□□ 1.58
TCF3-216ENST00000592395 PROM2Q8N271 834 aa24.89■■□□□ 1.58
TCF3-216ENST00000592395 RSPH6AQ9H0K4 717 aa24.89■■□□□ 1.58
TCF3-216ENST00000592395 KDM6AO15550 1401 aaPredicted RBP24.88■■□□□ 1.57
TCF3-216ENST00000592395 AKAP4Q5JQC9 854 aa24.88■■□□□ 1.57
TCF3-216ENST00000592395 MPRIPQ6WCQ1 1025 aa24.88■■□□□ 1.57
TCF3-216ENST00000592395 SCN11AQ9UI33 1791 aa24.88■■□□□ 1.57
TCF3-216ENST00000592395 MTHFSDQ2M296 383 aaKnown RBP24.87■■□□□ 1.57
TCF3-216ENST00000592395 VIRMAQ69YN4 1812 aaKnown RBP24.86■■□□□ 1.57
TCF3-216ENST00000592395 FCHSD2O94868 740 aa24.86■■□□□ 1.57
TCF3-216ENST00000592395 PRKAR2BP31323 418 aa24.86■■□□□ 1.57
TCF3-216ENST00000592395 NBPF14Q5TI25 921 aa24.86■■□□□ 1.57
TCF3-216ENST00000592395 TMOD3Q9NYL9 352 aa24.86■■□□□ 1.57
TCF3-216ENST00000592395 ERVV-2B6SEH9 535 aa24.85■■□□□ 1.57
TCF3-216ENST00000592395 PIGBQ92521 554 aa24.85■■□□□ 1.57
TCF3-216ENST00000592395 GAS2L2Q8NHY3 880 aa24.84■■□□□ 1.57
TCF3-216ENST00000592395 ADAMTS7Q9UKP4 1686 aa24.83■■□□□ 1.57
TCF3-216ENST00000592395 SLC27A3Q5K4L6 730 aa24.83■■□□□ 1.57
TCF3-216ENST00000592395 SMARCC1Q92922 1105 aaPredicted RBP24.82■■□□□ 1.56
TCF3-216ENST00000592395 PAPPAQ13219 1627 aa24.82■■□□□ 1.56
TCF3-216ENST00000592395 PALLDQ8WX93 1383 aa24.81■■□□□ 1.56
TCF3-216ENST00000592395 PSDA5PKW4 1024 aaPredicted RBP24.8■■□□□ 1.56
TCF3-216ENST00000592395 CABP4P57796 275 aa24.8■■□□□ 1.56
TCF3-216ENST00000592395 PHACTR3Q96KR7 559 aa24.8■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms