RNA–Protein interactions for RNA: ENST00000592388.1

VAT1-209, Transcript of vesicle amine transport 1, humanhuman

TSL 5

Gene VAT1, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-209ENST00000592388 NLRP2Q9NX02 1062 aa10.78□□□□□ -0.68
VAT1-209ENST00000592388 PRIM1P49642 420 aaKnown RBP10.77□□□□□ -0.69
VAT1-209ENST00000592388 ARHGAP27Q6ZUM4 889 aa10.77□□□□□ -0.69
VAT1-209ENST00000592388 RRAGCQ9HB90 399 aa10.76□□□□□ -0.69
VAT1-209ENST00000592388 BCS1LQ9Y276 419 aa10.76□□□□□ -0.69
VAT1-209ENST00000592388 SRPK2P78362 688 aaKnown RBP10.75□□□□□ -0.69
VAT1-209ENST00000592388 SMC1BQ8NDV3 1235 aa10.75□□□□□ -0.69
VAT1-209ENST00000592388 CICQ96RK0 1608 aaPredicted RBP10.74□□□□□ -0.69
VAT1-209ENST00000592388 C9orf131Q5VYM1 1079 aa10.74□□□□□ -0.69
VAT1-209ENST00000592388 SMIM5Q71RC9 77 aa10.74□□□□□ -0.69
VAT1-209ENST00000592388 KCNH5Q8NCM2 988 aa10.74□□□□□ -0.69
VAT1-209ENST00000592388 CABP2Q9NPB3 220 aa10.74□□□□□ -0.69
VAT1-209ENST00000592388 FLAD1Q8NFF5 587 aa10.73□□□□□ -0.69
VAT1-209ENST00000592388 CABP1Q9NZU7 370 aa10.73□□□□□ -0.69
VAT1-209ENST00000592388 KCPQ6ZWJ8 1503 aa10.73□□□□□ -0.69
VAT1-209ENST00000592388 FOXN1O15353 648 aa10.72□□□□□ -0.69
VAT1-209ENST00000592388 KDM2BQ8NHM5 1336 aa10.72□□□□□ -0.69
VAT1-209ENST00000592388 PIK3C2AO00443 1686 aa10.72□□□□□ -0.69
VAT1-209ENST00000592388 LY75O60449 1722 aa10.71□□□□□ -0.69
VAT1-209ENST00000592388 PHF14O94880 888 aa10.71□□□□□ -0.69
VAT1-209ENST00000592388 NSD2O96028 1365 aa10.71□□□□□ -0.69
VAT1-209ENST00000592388 ERBB3P21860 1342 aa10.71□□□□□ -0.69
VAT1-209ENST00000592388 MLLT1Q03111 559 aaPredicted RBP10.71□□□□□ -0.69
VAT1-209ENST00000592388 ANKRD36BQ8N2N9 1353 aa10.71□□□□□ -0.69
VAT1-209ENST00000592388 USP47Q96K76 1375 aa10.7□□□□□ -0.7
VAT1-209ENST00000592388 A0A0G2JLW4 131 aa10.7□□□□□ -0.7
VAT1-209ENST00000592388 FCHSD2O94868 740 aa10.7□□□□□ -0.7
VAT1-209ENST00000592388 AMIGO3Q86WK7 504 aa10.7□□□□□ -0.7
VAT1-209ENST00000592388 ABHD8Q96I13 439 aa10.7□□□□□ -0.7
VAT1-209ENST00000592388 PRDM10Q9NQV6 1147 aa10.7□□□□□ -0.7
VAT1-209ENST00000592388 PLEKHG2Q9H7P9 1386 aa10.69□□□□□ -0.7
VAT1-209ENST00000592388 NBPF1Q3BBV0 1214 aa10.69□□□□□ -0.7
VAT1-209ENST00000592388 MKRN1Q9UHC7 482 aaKnown RBP10.69□□□□□ -0.7
VAT1-209ENST00000592388 PXDNLA1KZ92 1463 aa10.68□□□□□ -0.7
VAT1-209ENST00000592388 TTC21BQ7Z4L5 1316 aa10.68□□□□□ -0.7
VAT1-209ENST00000592388 ANKRD24Q8TF21 1146 aa10.68□□□□□ -0.7
VAT1-209ENST00000592388 RNF181Q9P0P0 153 aa10.68□□□□□ -0.7
VAT1-209ENST00000592388 C10orf71Q711Q0 1435 aa10.67□□□□□ -0.7
VAT1-209ENST00000592388 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.67□□□□□ -0.7
VAT1-209ENST00000592388 AK7Q96M32 723 aa10.67□□□□□ -0.7
VAT1-209ENST00000592388 CCDC85CA6NKD9 419 aa10.66□□□□□ -0.7
VAT1-209ENST00000592388 DPEP1P16444 411 aa10.66□□□□□ -0.7
VAT1-209ENST00000592388 CTCFP49711 727 aaPredicted RBP10.66□□□□□ -0.7
VAT1-209ENST00000592388 TGFB2P61812 414 aa10.66□□□□□ -0.7
VAT1-209ENST00000592388 STAC3Q96MF2 364 aa10.66□□□□□ -0.7
VAT1-209ENST00000592388 NFAT5O94916 1531 aa10.66□□□□□ -0.7
VAT1-209ENST00000592388 DOT1LQ8TEK3 1739 aa10.66□□□□□ -0.7
VAT1-209ENST00000592388 N4BP2Q86UW6 1770 aaPredicted RBP10.65□□□□□ -0.7
VAT1-209ENST00000592388 LBX1P52954 281 aa10.65□□□□□ -0.7
VAT1-209ENST00000592388 AIDAQ96BJ3 306 aa10.65□□□□□ -0.7
VAT1-209ENST00000592388 C5P01031 1676 aa10.65□□□□□ -0.7
VAT1-209ENST00000592388 MON2Q7Z3U7 1717 aa10.64□□□□□ -0.71
VAT1-209ENST00000592388 USP54Q70EL1 1684 aa10.64□□□□□ -0.71
VAT1-209ENST00000592388 MMP10P09238 476 aa10.64□□□□□ -0.71
VAT1-209ENST00000592388 LTV1Q96GA3 475 aaPredicted RBP10.64□□□□□ -0.71
VAT1-209ENST00000592388 ZCRB1Q8TBF4 217 aaKnown RBP10.63□□□□□ -0.71
VAT1-209ENST00000592388 SIN3AQ96ST3 1273 aa10.63□□□□□ -0.71
VAT1-209ENST00000592388 PALLDQ8WX93 1383 aa10.63□□□□□ -0.71
VAT1-209ENST00000592388 CENPJQ9HC77 1338 aaPredicted RBP10.62□□□□□ -0.71
VAT1-209ENST00000592388 PKD1L3Q7Z443 1732 aa10.62□□□□□ -0.71
VAT1-209ENST00000592388 VEGFAP15692 232 aaPredicted RBP10.62□□□□□ -0.71
VAT1-209ENST00000592388 HMGB2P26583 209 aaKnown RBP10.62□□□□□ -0.71
VAT1-209ENST00000592388 RGS19P49795 217 aa10.62□□□□□ -0.71
VAT1-209ENST00000592388 L3MBTL2Q969R5 705 aa10.62□□□□□ -0.71
VAT1-209ENST00000592388 TNRC6CQ9HCJ0 1690 aaKnown RBP10.62□□□□□ -0.71
VAT1-209ENST00000592388 KIAA1551Q9HCM1 1747 aa10.61□□□□□ -0.71
VAT1-209ENST00000592388 TTC21AQ8NDW8 1320 aa10.61□□□□□ -0.71
VAT1-209ENST00000592388 SSFA2P28290 1259 aa10.61□□□□□ -0.71
VAT1-209ENST00000592388 ZNF692Q9BU19 519 aaPredicted RBP10.61□□□□□ -0.71
VAT1-209ENST00000592388 CREBZFQ9NS37 354 aa10.61□□□□□ -0.71
VAT1-209ENST00000592388 LTN1O94822 1766 aa10.6□□□□□ -0.71
VAT1-209ENST00000592388 MPRIPQ6WCQ1 1025 aa10.6□□□□□ -0.71
VAT1-209ENST00000592388 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.6□□□□□ -0.71
VAT1-209ENST00000592388 CFAP44Q96MT7 982 aa10.6□□□□□ -0.71
VAT1-209ENST00000592388 C4BP0C0L5 1744 aa10.6□□□□□ -0.71
VAT1-209ENST00000592388 TOGARAM1Q9Y4F4 1720 aa10.6□□□□□ -0.71
VAT1-209ENST00000592388 TAF1LQ8IZX4 1826 aa10.59□□□□□ -0.71
VAT1-209ENST00000592388 KCNA3P22001 575 aa10.59□□□□□ -0.71
VAT1-209ENST00000592388 DALRD3Q5D0E6 543 aaKnown RBP10.59□□□□□ -0.71
VAT1-209ENST00000592388 DCAF5Q96JK2 942 aa10.59□□□□□ -0.71
VAT1-209ENST00000592388 CCDC87Q9NVE4 849 aa10.59□□□□□ -0.71
VAT1-209ENST00000592388 PIM2Q9P1W9 311 aa10.59□□□□□ -0.71
VAT1-209ENST00000592388 NSD3Q9BZ95 1437 aa10.58□□□□□ -0.72
VAT1-209ENST00000592388 UBR3Q6ZT12 1888 aa10.58□□□□□ -0.72
VAT1-209ENST00000592388 ROCK2O75116 1388 aaKnown RBP10.58□□□□□ -0.72
VAT1-209ENST00000592388 CNTNAP1P78357 1384 aa10.58□□□□□ -0.72
VAT1-209ENST00000592388 GLTPD2A6NH11 291 aa10.58□□□□□ -0.72
VAT1-209ENST00000592388 GNPATO15228 680 aa10.58□□□□□ -0.72
VAT1-209ENST00000592388 HSPA8P11142 646 aaKnown RBP10.58□□□□□ -0.72
VAT1-209ENST00000592388 NEUROD1Q13562 356 aa10.58□□□□□ -0.72
VAT1-209ENST00000592388 LINC00116Q8NCU8 138 aa10.58□□□□□ -0.72
VAT1-209ENST00000592388 WBP1LQ9NX94 342 aa10.58□□□□□ -0.72
VAT1-209ENST00000592388 KIF13BQ9NQT8 1826 aa10.58□□□□□ -0.72
VAT1-209ENST00000592388 VEGFBP49765 207 aa10.57□□□□□ -0.72
VAT1-209ENST00000592388 RASSF7Q02833 373 aa10.57□□□□□ -0.72
VAT1-209ENST00000592388 NME9Q86XW9 330 aa10.57□□□□□ -0.72
VAT1-209ENST00000592388 KTN1Q86UP2 1357 aaKnown RBP10.56□□□□□ -0.72
VAT1-209ENST00000592388 MEGF6O75095 1541 aa10.56□□□□□ -0.72
VAT1-209ENST00000592388 PDE4DIPQ5VU43 2346 aa10.55□□□□□ -0.72
VAT1-209ENST00000592388 POTECB2RU33 542 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms