RNA–Protein interactions for RNA: ENST00000592154.1

GPATCH8-209, Transcript of G-patch domain containing 8, humanhuman

TSL 2

Gene GPATCH8, Length 650 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH8-209ENST00000592154 ERBB3P21860 1342 aa13.03□□□□□ -0.32
GPATCH8-209ENST00000592154 NLRP2Q9NX02 1062 aa13.02□□□□□ -0.33
GPATCH8-209ENST00000592154 COL23A1Q86Y22 540 aaPredicted RBP13.01□□□□□ -0.33
GPATCH8-209ENST00000592154 TTC21BQ7Z4L5 1316 aa13□□□□□ -0.33
GPATCH8-209ENST00000592154 CENPJQ9HC77 1338 aaPredicted RBP13□□□□□ -0.33
GPATCH8-209ENST00000592154 TOMM70O94826 608 aa13□□□□□ -0.33
GPATCH8-209ENST00000592154 UBR3Q6ZT12 1888 aa12.99□□□□□ -0.33
GPATCH8-209ENST00000592154 TOGARAM1Q9Y4F4 1720 aa12.99□□□□□ -0.33
GPATCH8-209ENST00000592154 ANKRD36BQ8N2N9 1353 aa12.99□□□□□ -0.33
GPATCH8-209ENST00000592154 IGSF1Q8N6C5 1336 aa12.99□□□□□ -0.33
GPATCH8-209ENST00000592154 TTC21AQ8NDW8 1320 aa12.99□□□□□ -0.33
GPATCH8-209ENST00000592154 SYTL4Q96C24 671 aaPredicted RBP12.99□□□□□ -0.33
GPATCH8-209ENST00000592154 CCNL1Q9UK58 526 aaPredicted RBP12.99□□□□□ -0.33
GPATCH8-209ENST00000592154 RGPD2P0DJD1 1756 aa12.99□□□□□ -0.33
GPATCH8-209ENST00000592154 PKD1L3Q7Z443 1732 aa12.99□□□□□ -0.33
GPATCH8-209ENST00000592154 NSD2O96028 1365 aa12.98□□□□□ -0.33
GPATCH8-209ENST00000592154 JMYQ8N9B5 988 aa12.98□□□□□ -0.33
GPATCH8-209ENST00000592154 KLRG1Q96E93 195 aa12.98□□□□□ -0.33
GPATCH8-209ENST00000592154 WWC3Q9ULE0 1092 aa12.98□□□□□ -0.33
GPATCH8-209ENST00000592154 KIAA1551Q9HCM1 1747 aa12.98□□□□□ -0.33
GPATCH8-209ENST00000592154 KIF13BQ9NQT8 1826 aa12.97□□□□□ -0.33
GPATCH8-209ENST00000592154 N4BP2Q86UW6 1770 aaPredicted RBP12.97□□□□□ -0.33
GPATCH8-209ENST00000592154 DDX54Q8TDD1 881 aaKnown RBP12.97□□□□□ -0.33
GPATCH8-209ENST00000592154 C4BP0C0L5 1744 aa12.96□□□□□ -0.33
GPATCH8-209ENST00000592154 TNRC6CQ9HCJ0 1690 aaKnown RBP12.96□□□□□ -0.34
GPATCH8-209ENST00000592154 PRIM1P49642 420 aaKnown RBP12.95□□□□□ -0.34
GPATCH8-209ENST00000592154 ZNF692Q9BU19 519 aaPredicted RBP12.95□□□□□ -0.34
GPATCH8-209ENST00000592154 BRCA1P38398 1863 aaKnown RBP12.95□□□□□ -0.34
GPATCH8-209ENST00000592154 USP47Q96K76 1375 aa12.94□□□□□ -0.34
GPATCH8-209ENST00000592154 SLC34A2O95436 690 aa12.94□□□□□ -0.34
GPATCH8-209ENST00000592154 HTRA3P83110 453 aa12.94□□□□□ -0.34
GPATCH8-209ENST00000592154 ANKRD24Q8TF21 1146 aa12.94□□□□□ -0.34
GPATCH8-209ENST00000592154 NBPF1Q3BBV0 1214 aa12.93□□□□□ -0.34
GPATCH8-209ENST00000592154 FLAD1Q8NFF5 587 aa12.93□□□□□ -0.34
GPATCH8-209ENST00000592154 RBM46Q8TBY0 533 aaKnown RBP12.93□□□□□ -0.34
GPATCH8-209ENST00000592154 KTN1Q86UP2 1357 aaKnown RBP12.93□□□□□ -0.34
GPATCH8-209ENST00000592154 RAB3GAP2Q9H2M9 1393 aa12.93□□□□□ -0.34
GPATCH8-209ENST00000592154 ITGB4P16144 1822 aa12.92□□□□□ -0.34
GPATCH8-209ENST00000592154 ARFGEF1Q9Y6D6 1849 aa12.92□□□□□ -0.34
GPATCH8-209ENST00000592154 NMRK2Q9NPI5 230 aa12.92□□□□□ -0.34
GPATCH8-209ENST00000592154 EVC2Q86UK5 1308 aa12.91□□□□□ -0.34
GPATCH8-209ENST00000592154 C16orf71Q8IYS4 520 aaPredicted RBP12.91□□□□□ -0.34
GPATCH8-209ENST00000592154 USP31Q70CQ4 1352 aa12.91□□□□□ -0.34
GPATCH8-209ENST00000592154 NSD3Q9BZ95 1437 aa12.89□□□□□ -0.35
GPATCH8-209ENST00000592154 FSTL1Q12841 308 aa12.89□□□□□ -0.35
GPATCH8-209ENST00000592154 PXDNLA1KZ92 1463 aa12.89□□□□□ -0.35
GPATCH8-209ENST00000592154 MEGF6O75095 1541 aa12.88□□□□□ -0.35
GPATCH8-209ENST00000592154 HMGB2P26583 209 aaKnown RBP12.88□□□□□ -0.35
GPATCH8-209ENST00000592154 CACNB1Q02641 598 aaPredicted RBP12.88□□□□□ -0.35
GPATCH8-209ENST00000592154 PLEKHG2Q9H7P9 1386 aa12.88□□□□□ -0.35
GPATCH8-209ENST00000592154 PPP4R3CPQ6ZMV5 832 aa12.87□□□□□ -0.35
GPATCH8-209ENST00000592154 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.87□□□□□ -0.35
GPATCH8-209ENST00000592154 MAP2P11137 1827 aaKnown RBP12.86□□□□□ -0.35
GPATCH8-209ENST00000592154 PALLDQ8WX93 1383 aa12.86□□□□□ -0.35
GPATCH8-209ENST00000592154 HSPA1AP0DMV8 641 aaKnown RBP12.86□□□□□ -0.35
GPATCH8-209ENST00000592154 HSPA1BP0DMV9 641 aaKnown RBP12.86□□□□□ -0.35
GPATCH8-209ENST00000592154 ZCRB1Q8TBF4 217 aaKnown RBP12.86□□□□□ -0.35
GPATCH8-209ENST00000592154 AK7Q96M32 723 aa12.86□□□□□ -0.35
GPATCH8-209ENST00000592154 SBF1O95248 1867 aa12.86□□□□□ -0.35
GPATCH8-209ENST00000592154 KCPQ6ZWJ8 1503 aa12.86□□□□□ -0.35
GPATCH8-209ENST00000592154 C10orf71Q711Q0 1435 aa12.86□□□□□ -0.35
GPATCH8-209ENST00000592154 PHF14O94880 888 aa12.85□□□□□ -0.35
GPATCH8-209ENST00000592154 NME9Q86XW9 330 aa12.85□□□□□ -0.35
GPATCH8-209ENST00000592154 LTV1Q96GA3 475 aaPredicted RBP12.84□□□□□ -0.35
GPATCH8-209ENST00000592154 BCS1LQ9Y276 419 aa12.84□□□□□ -0.35
GPATCH8-209ENST00000592154 SBNO2Q9Y2G9 1366 aa12.83□□□□□ -0.36
GPATCH8-209ENST00000592154 C4AP0C0L4 1744 aa12.83□□□□□ -0.36
GPATCH8-209ENST00000592154 ARHGAP27Q6ZUM4 889 aa12.83□□□□□ -0.36
GPATCH8-209ENST00000592154 AMIGO3Q86WK7 504 aa12.83□□□□□ -0.36
GPATCH8-209ENST00000592154 CD163L1Q9NR16 1453 aa12.83□□□□□ -0.36
GPATCH8-209ENST00000592154 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.82□□□□□ -0.36
GPATCH8-209ENST00000592154 IP6K1Q92551 441 aa12.82□□□□□ -0.36
GPATCH8-209ENST00000592154 KDM2BQ8NHM5 1336 aa12.82□□□□□ -0.36
GPATCH8-209ENST00000592154 EDC4Q6P2E9 1401 aaKnown RBP12.81□□□□□ -0.36
GPATCH8-209ENST00000592154 SSFA2P28290 1259 aa12.81□□□□□ -0.36
GPATCH8-209ENST00000592154 TIAM2Q8IVF5 1701 aa12.8□□□□□ -0.36
GPATCH8-209ENST00000592154 C9orf131Q5VYM1 1079 aa12.8□□□□□ -0.36
GPATCH8-209ENST00000592154 SMIM5Q71RC9 77 aa12.8□□□□□ -0.36
GPATCH8-209ENST00000592154 SMC1BQ8NDV3 1235 aa12.8□□□□□ -0.36
GPATCH8-209ENST00000592154 FCHSD2O94868 740 aa12.79□□□□□ -0.36
GPATCH8-209ENST00000592154 HOXD11P31277 338 aaPredicted RBP12.79□□□□□ -0.36
GPATCH8-209ENST00000592154 TGFB2P61812 414 aa12.79□□□□□ -0.36
GPATCH8-209ENST00000592154 CCDC88AQ3V6T2 1871 aa12.78□□□□□ -0.36
GPATCH8-209ENST00000592154 MMP10P09238 476 aa12.78□□□□□ -0.36
GPATCH8-209ENST00000592154 RRAGCQ9HB90 399 aa12.78□□□□□ -0.36
GPATCH8-209ENST00000592154 CGNL1Q0VF96 1302 aa12.78□□□□□ -0.36
GPATCH8-209ENST00000592154 A0A0G2JLW4 131 aa12.77□□□□□ -0.37
GPATCH8-209ENST00000592154 MPRIPQ6WCQ1 1025 aa12.77□□□□□ -0.37
GPATCH8-209ENST00000592154 SMARCC1Q92922 1105 aaPredicted RBP12.77□□□□□ -0.37
GPATCH8-209ENST00000592154 PCDH10Q9P2E7 1040 aa12.77□□□□□ -0.37
GPATCH8-209ENST00000592154 PCDH11XQ9BZA7 1347 aa12.77□□□□□ -0.37
GPATCH8-209ENST00000592154 PCDH11YQ9BZA8 1340 aa12.77□□□□□ -0.37
GPATCH8-209ENST00000592154 COL5A3P25940 1745 aaPredicted RBP12.76□□□□□ -0.37
GPATCH8-209ENST00000592154 HOXC9P31274 260 aa12.76□□□□□ -0.37
GPATCH8-209ENST00000592154 HDGFL2Q7Z4V5 671 aaPredicted RBP12.76□□□□□ -0.37
GPATCH8-209ENST00000592154 RNF181Q9P0P0 153 aa12.76□□□□□ -0.37
GPATCH8-209ENST00000592154 GNPATO15228 680 aa12.75□□□□□ -0.37
GPATCH8-209ENST00000592154 MAP3K19Q56UN5 1328 aa12.75□□□□□ -0.37
GPATCH8-209ENST00000592154 SMG6Q86US8 1419 aaKnown RBP12.75□□□□□ -0.37
GPATCH8-209ENST00000592154 LINC00116Q8NCU8 138 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms