RNA–Protein interactions for RNA: ENST00000592023.5

ERCC1-213, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-213ENST00000592023 DDX54Q8TDD1 881 aaKnown RBP20.88■□□□□ 0.93
ERCC1-213ENST00000592023 PLSCR1O15162 318 aa20.86■□□□□ 0.93
ERCC1-213ENST00000592023 POLKQ9UBT6 870 aa20.86■□□□□ 0.93
ERCC1-213ENST00000592023 RAPGEF4Q8WZA2 1011 aa20.85■□□□□ 0.93
ERCC1-213ENST00000592023 WASHC2AQ641Q2 1341 aa20.84■□□□□ 0.93
ERCC1-213ENST00000592023 NBPF14Q5TI25 921 aa20.84■□□□□ 0.93
ERCC1-213ENST00000592023 ZCRB1Q8TBF4 217 aaKnown RBP20.84■□□□□ 0.93
ERCC1-213ENST00000592023 KNSTRNQ9Y448 316 aa20.84■□□□□ 0.93
ERCC1-213ENST00000592023 TATP17735 454 aaPredicted RBP20.83■□□□□ 0.93
ERCC1-213ENST00000592023 NCAPD2Q15021 1401 aa20.83■□□□□ 0.93
ERCC1-213ENST00000592023 PKD1L3Q7Z443 1732 aa20.83■□□□□ 0.92
ERCC1-213ENST00000592023 MORC1Q86VD1 984 aa20.81■□□□□ 0.92
ERCC1-213ENST00000592023 ANO8Q9HCE9 1232 aaPredicted RBP20.81■□□□□ 0.92
ERCC1-213ENST00000592023 KAT6BQ8WYB5 2073 aa20.81■□□□□ 0.92
ERCC1-213ENST00000592023 TXNRD1Q16881 649 aa20.79■□□□□ 0.92
ERCC1-213ENST00000592023 PROM2Q8N271 834 aa20.79■□□□□ 0.92
ERCC1-213ENST00000592023 SYTL4Q96C24 671 aaPredicted RBP20.79■□□□□ 0.92
ERCC1-213ENST00000592023 PCDH11XQ9BZA7 1347 aa20.78■□□□□ 0.92
ERCC1-213ENST00000592023 PCDH11YQ9BZA8 1340 aa20.78■□□□□ 0.92
ERCC1-213ENST00000592023 EYA1Q99502 592 aa20.78■□□□□ 0.92
ERCC1-213ENST00000592023 EIF4A2Q14240 407 aaKnown RBP20.77■□□□□ 0.92
ERCC1-213ENST00000592023 AMER1Q5JTC6 1135 aaPredicted RBP20.77■□□□□ 0.92
ERCC1-213ENST00000592023 PAPPAQ13219 1627 aa20.77■□□□□ 0.92
ERCC1-213ENST00000592023 TOGARAM1Q9Y4F4 1720 aa20.76■□□□□ 0.91
ERCC1-213ENST00000592023 PRIM1P49642 420 aaKnown RBP20.75■□□□□ 0.91
ERCC1-213ENST00000592023 CASZ1Q86V15 1759 aa20.74■□□□□ 0.91
ERCC1-213ENST00000592023 CYP27B1O15528 508 aa20.72■□□□□ 0.91
ERCC1-213ENST00000592023 STK32BQ9NY57 414 aa20.72■□□□□ 0.91
ERCC1-213ENST00000592023 LY75O60449 1722 aa20.72■□□□□ 0.91
ERCC1-213ENST00000592023 IGSF1Q8N6C5 1336 aa20.72■□□□□ 0.91
ERCC1-213ENST00000592023 CC2D1BQ5T0F9 858 aaKnown RBP20.71■□□□□ 0.91
ERCC1-213ENST00000592023 SRCAPQ6ZRS2 3230 aa20.7■□□□□ 0.9
ERCC1-213ENST00000592023 PER1O15534 1290 aaPredicted RBP20.7■□□□□ 0.9
ERCC1-213ENST00000592023 SPG7Q9UQ90 795 aa20.7■□□□□ 0.9
ERCC1-213ENST00000592023 CNGB1Q14028 1251 aaPredicted RBP20.69■□□□□ 0.9
ERCC1-213ENST00000592023 ITGB4P16144 1822 aa20.69■□□□□ 0.9
ERCC1-213ENST00000592023 SLC15A2Q16348 729 aa20.68■□□□□ 0.9
ERCC1-213ENST00000592023 LRRC4BQ9NT99 713 aa20.68■□□□□ 0.9
ERCC1-213ENST00000592023 PDGFDQ9GZP0 370 aaPredicted RBP20.66■□□□□ 0.9
ERCC1-213ENST00000592023 PLEKHG2Q9H7P9 1386 aa20.65■□□□□ 0.9
ERCC1-213ENST00000592023 KCNQ4P56696 695 aa20.65■□□□□ 0.9
ERCC1-213ENST00000592023 ZNF827Q17R98 1081 aa20.65■□□□□ 0.9
ERCC1-213ENST00000592023 SLC27A3Q5K4L6 730 aa20.65■□□□□ 0.9
ERCC1-213ENST00000592023 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.65■□□□□ 0.9
ERCC1-213ENST00000592023 NPC1L1Q9UHC9 1359 aa20.64■□□□□ 0.89
ERCC1-213ENST00000592023 MPRIPQ6WCQ1 1025 aa20.64■□□□□ 0.89
ERCC1-213ENST00000592023 AEBP1Q8IUX7 1158 aa20.64■□□□□ 0.89
ERCC1-213ENST00000592023 SPON1Q9HCB6 807 aa20.64■□□□□ 0.89
ERCC1-213ENST00000592023 TUBGCP6Q96RT7 1819 aa20.64■□□□□ 0.89
ERCC1-213ENST00000592023 PHKG2P15735 406 aa20.63■□□□□ 0.89
ERCC1-213ENST00000592023 MTHFSP49914 203 aa20.63■□□□□ 0.89
ERCC1-213ENST00000592023 PALLDQ8WX93 1383 aa20.62■□□□□ 0.89
ERCC1-213ENST00000592023 QSER1Q2KHR3 1735 aa20.62■□□□□ 0.89
ERCC1-213ENST00000592023 C5P01031 1676 aa20.62■□□□□ 0.89
ERCC1-213ENST00000592023 ZBTB7AO95365 584 aa20.62■□□□□ 0.89
ERCC1-213ENST00000592023 IFNL2Q8IZJ0 200 aa20.62■□□□□ 0.89
ERCC1-213ENST00000592023 CCNL1Q9UK58 526 aaPredicted RBP20.62■□□□□ 0.89
ERCC1-213ENST00000592023 IL13P35225 146 aa20.61■□□□□ 0.89
ERCC1-213ENST00000592023 NKX1-1Q15270 411 aaPredicted RBP20.61■□□□□ 0.89
ERCC1-213ENST00000592023 SULT6B1Q6IMI4 303 aa20.6■□□□□ 0.89
ERCC1-213ENST00000592023 KDRP35968 1356 aa20.59■□□□□ 0.89
ERCC1-213ENST00000592023 AKT1S1Q96B36 256 aa20.59■□□□□ 0.89
ERCC1-213ENST00000592023 PPP1R1BQ9UD71 204 aaPredicted RBP20.59■□□□□ 0.89
ERCC1-213ENST00000592023 COL3A1P02461 1466 aaPredicted RBP20.58■□□□□ 0.89
ERCC1-213ENST00000592023 PLEKHO1Q53GL0 409 aaPredicted RBP20.58■□□□□ 0.89
ERCC1-213ENST00000592023 ZNF530Q6P9A1 599 aaPredicted RBP20.58■□□□□ 0.89
ERCC1-213ENST00000592023 TAF1LQ8IZX4 1826 aa20.57■□□□□ 0.88
ERCC1-213ENST00000592023 PIGBQ92521 554 aa20.57■□□□□ 0.88
ERCC1-213ENST00000592023 TMOD3Q9NYL9 352 aa20.57■□□□□ 0.88
ERCC1-213ENST00000592023 KDM6AO15550 1401 aaPredicted RBP20.56■□□□□ 0.88
ERCC1-213ENST00000592023 ATF5Q9Y2D1 282 aaPredicted RBP20.56■□□□□ 0.88
ERCC1-213ENST00000592023 DIAPH1O60610 1272 aaKnown RBP20.55■□□□□ 0.88
ERCC1-213ENST00000592023 AMOTQ4VCS5 1084 aa20.55■□□□□ 0.88
ERCC1-213ENST00000592023 SMARCC1Q92922 1105 aaPredicted RBP20.55■□□□□ 0.88
ERCC1-213ENST00000592023 PNPLA7Q6ZV29 1317 aa20.54■□□□□ 0.88
ERCC1-213ENST00000592023 HMOX1P09601 288 aa20.54■□□□□ 0.88
ERCC1-213ENST00000592023 MTFR1LQ9H019 292 aa20.54■□□□□ 0.88
ERCC1-213ENST00000592023 TFCP2L1Q9NZI6 479 aa20.54■□□□□ 0.88
ERCC1-213ENST00000592023 C4BP0C0L5 1744 aa20.53■□□□□ 0.88
ERCC1-213ENST00000592023 HSP90AB1P08238 724 aaKnown RBP20.53■□□□□ 0.88
ERCC1-213ENST00000592023 C1orf141Q5JVX7 400 aa20.53■□□□□ 0.88
ERCC1-213ENST00000592023 PTGER2P43116 358 aa20.52■□□□□ 0.88
ERCC1-213ENST00000592023 DCAF5Q96JK2 942 aa20.52■□□□□ 0.88
ERCC1-213ENST00000592023 SCN11AQ9UI33 1791 aa20.5■□□□□ 0.87
ERCC1-213ENST00000592023 ASAP1Q9ULH1 1129 aa20.5■□□□□ 0.87
ERCC1-213ENST00000592023 U2SURPO15042 1029 aaKnown RBP20.49■□□□□ 0.87
ERCC1-213ENST00000592023 LOC102724428A0A0B4J2F2 783 aa20.48■□□□□ 0.87
ERCC1-213ENST00000592023 ERVV-2B6SEH9 535 aa20.48■□□□□ 0.87
ERCC1-213ENST00000592023 SIK1P57059 783 aa20.48■□□□□ 0.87
ERCC1-213ENST00000592023 CABP4P57796 275 aa20.47■□□□□ 0.87
ERCC1-213ENST00000592023 SGIP1Q9BQI5 828 aa20.47■□□□□ 0.87
ERCC1-213ENST00000592023 ATG3Q9NT62 314 aa20.47■□□□□ 0.87
ERCC1-213ENST00000592023 VIRMAQ69YN4 1812 aaKnown RBP20.47■□□□□ 0.87
ERCC1-213ENST00000592023 COL24A1Q17RW2 1714 aa20.47■□□□□ 0.87
ERCC1-213ENST00000592023 UBR3Q6ZT12 1888 aa20.46■□□□□ 0.87
ERCC1-213ENST00000592023 MSH5O43196 834 aa20.46■□□□□ 0.87
ERCC1-213ENST00000592023 AK7Q96M32 723 aa20.46■□□□□ 0.87
ERCC1-213ENST00000592023 CFAP53Q96M91 514 aa20.46■□□□□ 0.87
ERCC1-213ENST00000592023 PPP2R1AP30153 589 aa20.45■□□□□ 0.86
ERCC1-213ENST00000592023 SLC16A10Q8TF71 515 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms