RNA–Protein interactions for RNA: ENST00000591969.1

RAVER1-203, Transcript of ribonucleoprotein, PTB binding 1, humanhuman

TSL 3

Gene RAVER1, Length 742 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAVER1-203ENST00000591969 CAPN15O75808 1086 aa22.77■■□□□ 1.24
RAVER1-203ENST00000591969 NBPF1Q3BBV0 1214 aa22.77■■□□□ 1.24
RAVER1-203ENST00000591969 COL13A1Q5TAT6 717 aaPredicted RBP22.76■■□□□ 1.23
RAVER1-203ENST00000591969 CCNL1Q9UK58 526 aaPredicted RBP22.76■■□□□ 1.23
RAVER1-203ENST00000591969 SYTL4Q96C24 671 aaPredicted RBP22.75■■□□□ 1.23
RAVER1-203ENST00000591969 TAF1LQ8IZX4 1826 aa22.74■■□□□ 1.23
RAVER1-203ENST00000591969 DDX54Q8TDD1 881 aaKnown RBP22.74■■□□□ 1.23
RAVER1-203ENST00000591969 ANKRD24Q8TF21 1146 aa22.74■■□□□ 1.23
RAVER1-203ENST00000591969 PCNTO95613 3336 aa22.74■■□□□ 1.23
RAVER1-203ENST00000591969 PRIM1P49642 420 aaKnown RBP22.73■■□□□ 1.23
RAVER1-203ENST00000591969 EVC2Q86UK5 1308 aa22.73■■□□□ 1.23
RAVER1-203ENST00000591969 TOMM70O94826 608 aa22.72■■□□□ 1.23
RAVER1-203ENST00000591969 IGSF1Q8N6C5 1336 aa22.72■■□□□ 1.23
RAVER1-203ENST00000591969 KTN1Q86UP2 1357 aaKnown RBP22.71■■□□□ 1.23
RAVER1-203ENST00000591969 PRELPP51888 382 aa22.7■■□□□ 1.22
RAVER1-203ENST00000591969 USP31Q70CQ4 1352 aa22.7■■□□□ 1.22
RAVER1-203ENST00000591969 TNS4Q8IZW8 715 aa22.68■■□□□ 1.22
RAVER1-203ENST00000591969 USP47Q96K76 1375 aa22.67■■□□□ 1.22
RAVER1-203ENST00000591969 FLAD1Q8NFF5 587 aa22.67■■□□□ 1.22
RAVER1-203ENST00000591969 WWC3Q9ULE0 1092 aa22.67■■□□□ 1.22
RAVER1-203ENST00000591969 TOGARAM1Q9Y4F4 1720 aa22.67■■□□□ 1.22
RAVER1-203ENST00000591969 JMYQ8N9B5 988 aa22.66■■□□□ 1.22
RAVER1-203ENST00000591969 KLRG1Q96E93 195 aa22.66■■□□□ 1.22
RAVER1-203ENST00000591969 C4BP0C0L5 1744 aa22.65■■□□□ 1.22
RAVER1-203ENST00000591969 UBR3Q6ZT12 1888 aa22.64■■□□□ 1.22
RAVER1-203ENST00000591969 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.62■■□□□ 1.21
RAVER1-203ENST00000591969 RGPD2P0DJD1 1756 aa22.62■■□□□ 1.21
RAVER1-203ENST00000591969 KIF13BQ9NQT8 1826 aa22.61■■□□□ 1.21
RAVER1-203ENST00000591969 KIAA1551Q9HCM1 1747 aa22.6■■□□□ 1.21
RAVER1-203ENST00000591969 HMGB2P26583 209 aaKnown RBP22.6■■□□□ 1.21
RAVER1-203ENST00000591969 NME9Q86XW9 330 aa22.59■■□□□ 1.21
RAVER1-203ENST00000591969 RBM46Q8TBY0 533 aaKnown RBP22.59■■□□□ 1.21
RAVER1-203ENST00000591969 NMRK2Q9NPI5 230 aa22.59■■□□□ 1.21
RAVER1-203ENST00000591969 MEGF6O75095 1541 aa22.58■■□□□ 1.21
RAVER1-203ENST00000591969 HTRA3P83110 453 aa22.58■■□□□ 1.21
RAVER1-203ENST00000591969 ZCRB1Q8TBF4 217 aaKnown RBP22.57■■□□□ 1.2
RAVER1-203ENST00000591969 SBNO2Q9Y2G9 1366 aa22.57■■□□□ 1.2
RAVER1-203ENST00000591969 N4BP2Q86UW6 1770 aaPredicted RBP22.57■■□□□ 1.2
RAVER1-203ENST00000591969 NSD3Q9BZ95 1437 aa22.57■■□□□ 1.2
RAVER1-203ENST00000591969 PKD1L3Q7Z443 1732 aa22.56■■□□□ 1.2
RAVER1-203ENST00000591969 CD163L1Q9NR16 1453 aa22.55■■□□□ 1.2
RAVER1-203ENST00000591969 IP6K1Q92551 441 aa22.55■■□□□ 1.2
RAVER1-203ENST00000591969 LTV1Q96GA3 475 aaPredicted RBP22.55■■□□□ 1.2
RAVER1-203ENST00000591969 PALLDQ8WX93 1383 aa22.54■■□□□ 1.2
RAVER1-203ENST00000591969 PXDNLA1KZ92 1463 aa22.54■■□□□ 1.2
RAVER1-203ENST00000591969 FSTL1Q12841 308 aa22.53■■□□□ 1.2
RAVER1-203ENST00000591969 C16orf71Q8IYS4 520 aaPredicted RBP22.53■■□□□ 1.2
RAVER1-203ENST00000591969 AK7Q96M32 723 aa22.53■■□□□ 1.2
RAVER1-203ENST00000591969 BRCA1P38398 1863 aaKnown RBP22.52■■□□□ 1.2
RAVER1-203ENST00000591969 ITGB4P16144 1822 aa22.52■■□□□ 1.2
RAVER1-203ENST00000591969 TNRC6CQ9HCJ0 1690 aaKnown RBP22.52■■□□□ 1.2
RAVER1-203ENST00000591969 EDC4Q6P2E9 1401 aaKnown RBP22.51■■□□□ 1.19
RAVER1-203ENST00000591969 AMIGO3Q86WK7 504 aa22.51■■□□□ 1.19
RAVER1-203ENST00000591969 PHF14O94880 888 aa22.5■■□□□ 1.19
RAVER1-203ENST00000591969 PLEKHG2Q9H7P9 1386 aa22.5■■□□□ 1.19
RAVER1-203ENST00000591969 ARFGEF1Q9Y6D6 1849 aa22.49■■□□□ 1.19
RAVER1-203ENST00000591969 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.48■■□□□ 1.19
RAVER1-203ENST00000591969 SLC34A2O95436 690 aa22.48■■□□□ 1.19
RAVER1-203ENST00000591969 C10orf71Q711Q0 1435 aa22.47■■□□□ 1.19
RAVER1-203ENST00000591969 MAP2P11137 1827 aaKnown RBP22.46■■□□□ 1.19
RAVER1-203ENST00000591969 SSFA2P28290 1259 aa22.46■■□□□ 1.19
RAVER1-203ENST00000591969 BCS1LQ9Y276 419 aa22.46■■□□□ 1.19
RAVER1-203ENST00000591969 CGNL1Q0VF96 1302 aa22.46■■□□□ 1.19
RAVER1-203ENST00000591969 ARHGAP27Q6ZUM4 889 aa22.45■■□□□ 1.18
RAVER1-203ENST00000591969 KCPQ6ZWJ8 1503 aa22.44■■□□□ 1.18
RAVER1-203ENST00000591969 SMIM5Q71RC9 77 aa22.44■■□□□ 1.18
RAVER1-203ENST00000591969 HDGFL2Q7Z4V5 671 aaPredicted RBP22.44■■□□□ 1.18
RAVER1-203ENST00000591969 HOXC9P31274 260 aa22.43■■□□□ 1.18
RAVER1-203ENST00000591969 KDM2BQ8NHM5 1336 aa22.42■■□□□ 1.18
RAVER1-203ENST00000591969 HSPA1AP0DMV8 641 aaKnown RBP22.42■■□□□ 1.18
RAVER1-203ENST00000591969 HSPA1BP0DMV9 641 aaKnown RBP22.42■■□□□ 1.18
RAVER1-203ENST00000591969 TGFB2P61812 414 aa22.42■■□□□ 1.18
RAVER1-203ENST00000591969 SMARCC1Q92922 1105 aaPredicted RBP22.42■■□□□ 1.18
RAVER1-203ENST00000591969 MAP3K19Q56UN5 1328 aa22.41■■□□□ 1.18
RAVER1-203ENST00000591969 PCDH11XQ9BZA7 1347 aa22.41■■□□□ 1.18
RAVER1-203ENST00000591969 PCDH11YQ9BZA8 1340 aa22.41■■□□□ 1.18
RAVER1-203ENST00000591969 MPRIPQ6WCQ1 1025 aa22.41■■□□□ 1.18
RAVER1-203ENST00000591969 ROCK2O75116 1388 aaKnown RBP22.4■■□□□ 1.18
RAVER1-203ENST00000591969 MMP10P09238 476 aa22.4■■□□□ 1.18
RAVER1-203ENST00000591969 C9orf131Q5VYM1 1079 aa22.4■■□□□ 1.18
RAVER1-203ENST00000591969 A0A1W2PP64 1363 aa22.39■■□□□ 1.18
RAVER1-203ENST00000591969 A0A0G2JLW4 131 aa22.39■■□□□ 1.17
RAVER1-203ENST00000591969 RAPGEF4Q8WZA2 1011 aa22.39■■□□□ 1.17
RAVER1-203ENST00000591969 C4AP0C0L4 1744 aa22.39■■□□□ 1.17
RAVER1-203ENST00000591969 RTL1A6NKG5 1358 aa22.38■■□□□ 1.17
RAVER1-203ENST00000591969 AMPHP49418 695 aa22.38■■□□□ 1.17
RAVER1-203ENST00000591969 SMC1BQ8NDV3 1235 aa22.38■■□□□ 1.17
RAVER1-203ENST00000591969 TMC1Q8TDI8 760 aa22.38■■□□□ 1.17
RAVER1-203ENST00000591969 FCHSD2O94868 740 aa22.37■■□□□ 1.17
RAVER1-203ENST00000591969 SBF1O95248 1867 aa22.37■■□□□ 1.17
RAVER1-203ENST00000591969 NBPF6Q5VWK0 638 aa22.36■■□□□ 1.17
RAVER1-203ENST00000591969 LINC00116Q8NCU8 138 aa22.36■■□□□ 1.17
RAVER1-203ENST00000591969 NBPF4Q96M43 638 aa22.36■■□□□ 1.17
RAVER1-203ENST00000591969 TERF2IPQ9NYB0 399 aa22.36■■□□□ 1.17
RAVER1-203ENST00000591969 SMG6Q86US8 1419 aaKnown RBP22.35■■□□□ 1.17
RAVER1-203ENST00000591969 TATP17735 454 aaPredicted RBP22.35■■□□□ 1.17
RAVER1-203ENST00000591969 USHBP1Q8N6Y0 703 aa22.35■■□□□ 1.17
RAVER1-203ENST00000591969 GNPATO15228 680 aa22.34■■□□□ 1.17
RAVER1-203ENST00000591969 SLC12A5Q9H2X9 1139 aa22.34■■□□□ 1.17
RAVER1-203ENST00000591969 RRAGCQ9HB90 399 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms