RNA–Protein interactions for RNA: ENST00000591960.1

RDH13-219, Transcript of retinol dehydrogenase 13, humanhuman

TSL 5

Gene RDH13, Length 1,328 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH13-219ENST00000591960 BCL11BQ9C0K0 894 aaPredicted RBP18.58■□□□□ 0.57
RDH13-219ENST00000591960 RGPD3A6NKT7 1758 aaPredicted RBP18.57■□□□□ 0.56
RDH13-219ENST00000591960 RGPD4Q7Z3J3 1758 aa18.57■□□□□ 0.56
RDH13-219ENST00000591960 KCNQ2O43526 872 aa18.57■□□□□ 0.56
RDH13-219ENST00000591960 DDX54Q8TDD1 881 aaKnown RBP18.57■□□□□ 0.56
RDH13-219ENST00000591960 RAPGEF4Q8WZA2 1011 aa18.57■□□□□ 0.56
RDH13-219ENST00000591960 PKD1L3Q7Z443 1732 aa18.57■□□□□ 0.56
RDH13-219ENST00000591960 NUP188Q5SRE5 1749 aa18.56■□□□□ 0.56
RDH13-219ENST00000591960 TATP17735 454 aaPredicted RBP18.56■□□□□ 0.56
RDH13-219ENST00000591960 ACSBG1Q96GR2 724 aa18.56■□□□□ 0.56
RDH13-219ENST00000591960 CNGB1Q14028 1251 aaPredicted RBP18.55■□□□□ 0.56
RDH13-219ENST00000591960 PARD3Q8TEW0 1356 aa18.55■□□□□ 0.56
RDH13-219ENST00000591960 DOT1LQ8TEK3 1739 aa18.55■□□□□ 0.56
RDH13-219ENST00000591960 IGSF1Q8N6C5 1336 aa18.55■□□□□ 0.56
RDH13-219ENST00000591960 BTAF1O14981 1849 aa18.53■□□□□ 0.56
RDH13-219ENST00000591960 MTHFSP49914 203 aa18.53■□□□□ 0.56
RDH13-219ENST00000591960 PLSCR1O15162 318 aa18.52■□□□□ 0.56
RDH13-219ENST00000591960 KAT6BQ8WYB5 2073 aa18.52■□□□□ 0.56
RDH13-219ENST00000591960 IL13P35225 146 aa18.51■□□□□ 0.55
RDH13-219ENST00000591960 CYP27B1O15528 508 aa18.5■□□□□ 0.55
RDH13-219ENST00000591960 PCDH11XQ9BZA7 1347 aa18.5■□□□□ 0.55
RDH13-219ENST00000591960 PCDH11YQ9BZA8 1340 aa18.5■□□□□ 0.55
RDH13-219ENST00000591960 SRCAPQ6ZRS2 3230 aa18.5■□□□□ 0.55
RDH13-219ENST00000591960 PROM2Q8N271 834 aa18.49■□□□□ 0.55
RDH13-219ENST00000591960 TOGARAM1Q9Y4F4 1720 aa18.49■□□□□ 0.55
RDH13-219ENST00000591960 COL3A1P02461 1466 aaPredicted RBP18.49■□□□□ 0.55
RDH13-219ENST00000591960 AEBP1Q8IUX7 1158 aa18.49■□□□□ 0.55
RDH13-219ENST00000591960 ZEB1P37275 1124 aaPredicted RBP18.48■□□□□ 0.55
RDH13-219ENST00000591960 PRIM1P49642 420 aaKnown RBP18.48■□□□□ 0.55
RDH13-219ENST00000591960 PSDA5PKW4 1024 aaPredicted RBP18.47■□□□□ 0.55
RDH13-219ENST00000591960 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.47■□□□□ 0.55
RDH13-219ENST00000591960 KDRP35968 1356 aa18.46■□□□□ 0.55
RDH13-219ENST00000591960 PLEKHG2Q9H7P9 1386 aa18.46■□□□□ 0.55
RDH13-219ENST00000591960 SPG7Q9UQ90 795 aa18.46■□□□□ 0.55
RDH13-219ENST00000591960 ITGB4P16144 1822 aa18.45■□□□□ 0.54
RDH13-219ENST00000591960 TXNRD1Q16881 649 aa18.45■□□□□ 0.54
RDH13-219ENST00000591960 SULT6B1Q6IMI4 303 aa18.45■□□□□ 0.54
RDH13-219ENST00000591960 R3HDM1Q15032 1099 aaKnown RBP18.44■□□□□ 0.54
RDH13-219ENST00000591960 NKX1-1Q15270 411 aaPredicted RBP18.44■□□□□ 0.54
RDH13-219ENST00000591960 SYTL4Q96C24 671 aaPredicted RBP18.44■□□□□ 0.54
RDH13-219ENST00000591960 DIAPH1O60610 1272 aaKnown RBP18.43■□□□□ 0.54
RDH13-219ENST00000591960 PPP2R1AP30153 589 aa18.43■□□□□ 0.54
RDH13-219ENST00000591960 LY75O60449 1722 aa18.42■□□□□ 0.54
RDH13-219ENST00000591960 PHKG2P15735 406 aa18.42■□□□□ 0.54
RDH13-219ENST00000591960 ANO8Q9HCE9 1232 aaPredicted RBP18.42■□□□□ 0.54
RDH13-219ENST00000591960 PAPPAQ13219 1627 aa18.41■□□□□ 0.54
RDH13-219ENST00000591960 DDX10Q13206 875 aaKnown RBP18.41■□□□□ 0.54
RDH13-219ENST00000591960 IFNL2Q8IZJ0 200 aa18.41■□□□□ 0.54
RDH13-219ENST00000591960 HMOX1P09601 288 aa18.4■□□□□ 0.54
RDH13-219ENST00000591960 PLEKHO1Q53GL0 409 aaPredicted RBP18.39■□□□□ 0.53
RDH13-219ENST00000591960 NBPF14Q5TI25 921 aa18.39■□□□□ 0.53
RDH13-219ENST00000591960 LRRC4BQ9NT99 713 aa18.39■□□□□ 0.53
RDH13-219ENST00000591960 AMOTQ4VCS5 1084 aa18.37■□□□□ 0.53
RDH13-219ENST00000591960 ZNF530Q6P9A1 599 aaPredicted RBP18.37■□□□□ 0.53
RDH13-219ENST00000591960 MPRIPQ6WCQ1 1025 aa18.37■□□□□ 0.53
RDH13-219ENST00000591960 KDM6AO15550 1401 aaPredicted RBP18.36■□□□□ 0.53
RDH13-219ENST00000591960 KCNQ4P56696 695 aa18.35■□□□□ 0.53
RDH13-219ENST00000591960 PIGBQ92521 554 aa18.35■□□□□ 0.53
RDH13-219ENST00000591960 LRP5O75197 1615 aa18.35■□□□□ 0.53
RDH13-219ENST00000591960 CASZ1Q86V15 1759 aa18.34■□□□□ 0.53
RDH13-219ENST00000591960 U2SURPO15042 1029 aaKnown RBP18.34■□□□□ 0.53
RDH13-219ENST00000591960 CFAP53Q96M91 514 aa18.34■□□□□ 0.53
RDH13-219ENST00000591960 SLC27A3Q5K4L6 730 aa18.33■□□□□ 0.53
RDH13-219ENST00000591960 SCN11AQ9UI33 1791 aa18.32■□□□□ 0.52
RDH13-219ENST00000591960 SLC15A2Q16348 729 aa18.32■□□□□ 0.52
RDH13-219ENST00000591960 ZNF827Q17R98 1081 aa18.32■□□□□ 0.52
RDH13-219ENST00000591960 DCAF5Q96JK2 942 aa18.32■□□□□ 0.52
RDH13-219ENST00000591960 PDGFDQ9GZP0 370 aaPredicted RBP18.32■□□□□ 0.52
RDH13-219ENST00000591960 VIRMAQ69YN4 1812 aaKnown RBP18.32■□□□□ 0.52
RDH13-219ENST00000591960 PALLDQ8WX93 1383 aa18.32■□□□□ 0.52
RDH13-219ENST00000591960 HSP90AB1P08238 724 aaKnown RBP18.31■□□□□ 0.52
RDH13-219ENST00000591960 MTHFSDQ2M296 383 aaKnown RBP18.31■□□□□ 0.52
RDH13-219ENST00000591960 C1orf141Q5JVX7 400 aa18.31■□□□□ 0.52
RDH13-219ENST00000591960 STK32BQ9NY57 414 aa18.31■□□□□ 0.52
RDH13-219ENST00000591960 TMOD3Q9NYL9 352 aa18.31■□□□□ 0.52
RDH13-219ENST00000591960 TAF1LQ8IZX4 1826 aa18.31■□□□□ 0.52
RDH13-219ENST00000591960 TUBGCP6Q96RT7 1819 aa18.31■□□□□ 0.52
RDH13-219ENST00000591960 ERVV-2B6SEH9 535 aa18.3■□□□□ 0.52
RDH13-219ENST00000591960 CCNL1Q9UK58 526 aaPredicted RBP18.3■□□□□ 0.52
RDH13-219ENST00000591960 C5P01031 1676 aa18.3■□□□□ 0.52
RDH13-219ENST00000591960 ADAMTS7Q9UKP4 1686 aa18.3■□□□□ 0.52
RDH13-219ENST00000591960 AKAP4Q5JQC9 854 aa18.29■□□□□ 0.52
RDH13-219ENST00000591960 AKT1S1Q96B36 256 aa18.29■□□□□ 0.52
RDH13-219ENST00000591960 RSPH6AQ9H0K4 717 aa18.29■□□□□ 0.52
RDH13-219ENST00000591960 ASAP1Q9ULH1 1129 aa18.29■□□□□ 0.52
RDH13-219ENST00000591960 QSER1Q2KHR3 1735 aa18.29■□□□□ 0.52
RDH13-219ENST00000591960 RALBP1Q15311 655 aa18.28■□□□□ 0.52
RDH13-219ENST00000591960 SMARCC1Q92922 1105 aaPredicted RBP18.28■□□□□ 0.52
RDH13-219ENST00000591960 ATG3Q9NT62 314 aa18.27■□□□□ 0.52
RDH13-219ENST00000591960 NUDCQ9Y266 331 aa18.27■□□□□ 0.52
RDH13-219ENST00000591960 PRKAR2BP31323 418 aa18.26■□□□□ 0.51
RDH13-219ENST00000591960 LGR6Q9HBX8 967 aa18.26■□□□□ 0.51
RDH13-219ENST00000591960 U2AF1L5P0DN76 240 aaPredicted RBP18.25■□□□□ 0.51
RDH13-219ENST00000591960 CABP4P57796 275 aa18.25■□□□□ 0.51
RDH13-219ENST00000591960 U2AF1Q01081 240 aaKnown RBP eCLIP18.25■□□□□ 0.51
RDH13-219ENST00000591960 PHACTR3Q96KR7 559 aa18.25■□□□□ 0.51
RDH13-219ENST00000591960 MRC1P22897 1456 aa18.25■□□□□ 0.51
RDH13-219ENST00000591960 C4BP0C0L5 1744 aa18.24■□□□□ 0.51
RDH13-219ENST00000591960 LOC102724428A0A0B4J2F2 783 aa18.23■□□□□ 0.51
RDH13-219ENST00000591960 RNMTO43148 476 aaKnown RBP18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms