RNA–Protein interactions for RNA: ENST00000591880.2

GFAP-220, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 1,103 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-220ENST00000591880 PCDH11XQ9BZA7 1347 aa15.14■□□□□ 0.01
GFAP-220ENST00000591880 PCDH11YQ9BZA8 1340 aa15.14■□□□□ 0.01
GFAP-220ENST00000591880 LRP5O75197 1615 aa15.14■□□□□ 0.01
GFAP-220ENST00000591880 SHANK3Q9BYB0 1731 aa15.13■□□□□ 0.01
GFAP-220ENST00000591880 USHBP1Q8N6Y0 703 aa15.12■□□□□ 0.01
GFAP-220ENST00000591880 DDX54Q8TDD1 881 aaKnown RBP15.12■□□□□ 0.01
GFAP-220ENST00000591880 TNNT2P45379 298 aaPredicted RBP15.11■□□□□ 0.01
GFAP-220ENST00000591880 AMER1Q5JTC6 1135 aaPredicted RBP15.11■□□□□ 0.01
GFAP-220ENST00000591880 ACSBG1Q96GR2 724 aa15.11■□□□□ 0.01
GFAP-220ENST00000591880 PKD1L3Q7Z443 1732 aa15.11■□□□□ 0.01
GFAP-220ENST00000591880 NPC1L1Q9UHC9 1359 aa15.11■□□□□ 0.01
GFAP-220ENST00000591880 DOT1LQ8TEK3 1739 aa15.1■□□□□ 0.01
GFAP-220ENST00000591880 PSDA5PKW4 1024 aaPredicted RBP15.1■□□□□ 0.01
GFAP-220ENST00000591880 R3HDM1Q15032 1099 aaKnown RBP15.1■□□□□ 0.01
GFAP-220ENST00000591880 BTAF1O14981 1849 aa15.09■□□□□ 0.01
GFAP-220ENST00000591880 KCNQ2O43526 872 aa15.08■□□□□ 0
GFAP-220ENST00000591880 EIF4A2Q14240 407 aaKnown RBP15.08■□□□□ 0
GFAP-220ENST00000591880 EYA1Q99502 592 aa15.08■□□□□ 0
GFAP-220ENST00000591880 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.08■□□□□ 0
GFAP-220ENST00000591880 SPG7Q9UQ90 795 aa15.08■□□□□ 0
GFAP-220ENST00000591880 IGSF1Q8N6C5 1336 aa15.08■□□□□ 0
GFAP-220ENST00000591880 TXNRD1Q16881 649 aa15.07■□□□□ 0
GFAP-220ENST00000591880 PTF1AQ7RTS3 328 aa15.07■□□□□ 0
GFAP-220ENST00000591880 PER1O15534 1290 aaPredicted RBP15.06■□□□□ 0
GFAP-220ENST00000591880 HMGB2P26583 209 aaKnown RBP15.06■□□□□ 0
GFAP-220ENST00000591880 SLC27A3Q5K4L6 730 aa15.05■□□□□ -0
GFAP-220ENST00000591880 SYTL4Q96C24 671 aaPredicted RBP15.05■□□□□ -0
GFAP-220ENST00000591880 STK32BQ9NY57 414 aa15.05■□□□□ -0
GFAP-220ENST00000591880 PAPPAQ13219 1627 aa15.04■□□□□ -0
GFAP-220ENST00000591880 PRIM1P49642 420 aaKnown RBP15.03■□□□□ -0
GFAP-220ENST00000591880 PROM2Q8N271 834 aa15.03■□□□□ -0
GFAP-220ENST00000591880 CC2D1BQ5T0F9 858 aaKnown RBP15.02■□□□□ -0
GFAP-220ENST00000591880 IFNL2Q8IZJ0 200 aa15.02■□□□□ -0
GFAP-220ENST00000591880 ANO8Q9HCE9 1232 aaPredicted RBP15.02■□□□□ -0
GFAP-220ENST00000591880 LY75O60449 1722 aa15.01□□□□□ -0.01
GFAP-220ENST00000591880 CYP27B1O15528 508 aa15.01□□□□□ -0.01
GFAP-220ENST00000591880 NKX1-1Q15270 411 aaPredicted RBP15.01□□□□□ -0.01
GFAP-220ENST00000591880 SLC15A2Q16348 729 aa15.01□□□□□ -0.01
GFAP-220ENST00000591880 AMOTQ4VCS5 1084 aa15.01□□□□□ -0.01
GFAP-220ENST00000591880 KDRP35968 1356 aa15□□□□□ -0.01
GFAP-220ENST00000591880 HSP90AB1P08238 724 aaKnown RBP15□□□□□ -0.01
GFAP-220ENST00000591880 CASZ1Q86V15 1759 aa15□□□□□ -0.01
GFAP-220ENST00000591880 PHKG2P15735 406 aa14.99□□□□□ -0.01
GFAP-220ENST00000591880 IL13P35225 146 aa14.99□□□□□ -0.01
GFAP-220ENST00000591880 MTHFSP49914 203 aa14.99□□□□□ -0.01
GFAP-220ENST00000591880 PLEKHO1Q53GL0 409 aaPredicted RBP14.99□□□□□ -0.01
GFAP-220ENST00000591880 SPON1Q9HCB6 807 aa14.99□□□□□ -0.01
GFAP-220ENST00000591880 TOGARAM1Q9Y4F4 1720 aa14.99□□□□□ -0.01
GFAP-220ENST00000591880 SRCAPQ6ZRS2 3230 aa14.98□□□□□ -0.01
GFAP-220ENST00000591880 KAT6BQ8WYB5 2073 aa14.98□□□□□ -0.01
GFAP-220ENST00000591880 SMARCC1Q92922 1105 aaPredicted RBP14.98□□□□□ -0.01
GFAP-220ENST00000591880 QSER1Q2KHR3 1735 aa14.97□□□□□ -0.01
GFAP-220ENST00000591880 PALLDQ8WX93 1383 aa14.97□□□□□ -0.01
GFAP-220ENST00000591880 DIAPH1O60610 1272 aaKnown RBP14.96□□□□□ -0.01
GFAP-220ENST00000591880 SULT6B1Q6IMI4 303 aa14.96□□□□□ -0.01
GFAP-220ENST00000591880 MPRIPQ6WCQ1 1025 aa14.96□□□□□ -0.01
GFAP-220ENST00000591880 LRRC4BQ9NT99 713 aa14.96□□□□□ -0.01
GFAP-220ENST00000591880 TMOD3Q9NYL9 352 aa14.96□□□□□ -0.01
GFAP-220ENST00000591880 CCNL1Q9UK58 526 aaPredicted RBP14.96□□□□□ -0.01
GFAP-220ENST00000591880 ITGB4P16144 1822 aa14.95□□□□□ -0.02
GFAP-220ENST00000591880 C1orf141Q5JVX7 400 aa14.95□□□□□ -0.02
GFAP-220ENST00000591880 ZNF530Q6P9A1 599 aaPredicted RBP14.94□□□□□ -0.02
GFAP-220ENST00000591880 AKT1S1Q96B36 256 aa14.94□□□□□ -0.02
GFAP-220ENST00000591880 DCAF5Q96JK2 942 aa14.94□□□□□ -0.02
GFAP-220ENST00000591880 CFAP53Q96M91 514 aa14.94□□□□□ -0.02
GFAP-220ENST00000591880 COL3A1P02461 1466 aaPredicted RBP14.94□□□□□ -0.02
GFAP-220ENST00000591880 ERVV-2B6SEH9 535 aa14.93□□□□□ -0.02
GFAP-220ENST00000591880 AEBP1Q8IUX7 1158 aa14.93□□□□□ -0.02
GFAP-220ENST00000591880 MTFR1LQ9H019 292 aa14.93□□□□□ -0.02
GFAP-220ENST00000591880 PPP1R1BQ9UD71 204 aaPredicted RBP14.93□□□□□ -0.02
GFAP-220ENST00000591880 C5P01031 1676 aa14.93□□□□□ -0.02
GFAP-220ENST00000591880 ZNF827Q17R98 1081 aa14.92□□□□□ -0.02
GFAP-220ENST00000591880 PIGBQ92521 554 aa14.92□□□□□ -0.02
GFAP-220ENST00000591880 SLC16A10Q8TF71 515 aa14.91□□□□□ -0.02
GFAP-220ENST00000591880 TFCP2L1Q9NZI6 479 aa14.91□□□□□ -0.02
GFAP-220ENST00000591880 CNGB1Q14028 1251 aaPredicted RBP14.9□□□□□ -0.02
GFAP-220ENST00000591880 AKAP4Q5JQC9 854 aa14.9□□□□□ -0.02
GFAP-220ENST00000591880 KDM6AO15550 1401 aaPredicted RBP14.9□□□□□ -0.02
GFAP-220ENST00000591880 ZBTB7AO95365 584 aa14.89□□□□□ -0.03
GFAP-220ENST00000591880 FLAD1Q8NFF5 587 aa14.89□□□□□ -0.03
GFAP-220ENST00000591880 NUDCQ9Y266 331 aa14.89□□□□□ -0.03
GFAP-220ENST00000591880 PNPLA7Q6ZV29 1317 aa14.89□□□□□ -0.03
GFAP-220ENST00000591880 LOC102724428A0A0B4J2F2 783 aa14.88□□□□□ -0.03
GFAP-220ENST00000591880 HMOX1P09601 288 aa14.88□□□□□ -0.03
GFAP-220ENST00000591880 ZEB1P37275 1124 aaPredicted RBP14.88□□□□□ -0.03
GFAP-220ENST00000591880 SIK1P57059 783 aa14.88□□□□□ -0.03
GFAP-220ENST00000591880 C4BP0C0L5 1744 aa14.88□□□□□ -0.03
GFAP-220ENST00000591880 TAF1LQ8IZX4 1826 aa14.87□□□□□ -0.03
GFAP-220ENST00000591880 TUBGCP6Q96RT7 1819 aa14.87□□□□□ -0.03
GFAP-220ENST00000591880 ZNF831Q5JPB2 1677 aa14.87□□□□□ -0.03
GFAP-220ENST00000591880 U2SURPO15042 1029 aaKnown RBP14.87□□□□□ -0.03
GFAP-220ENST00000591880 CABP4P57796 275 aa14.87□□□□□ -0.03
GFAP-220ENST00000591880 GAS2L2Q8NHY3 880 aa14.87□□□□□ -0.03
GFAP-220ENST00000591880 AK7Q96M32 723 aa14.87□□□□□ -0.03
GFAP-220ENST00000591880 MRC1P22897 1456 aa14.87□□□□□ -0.03
GFAP-220ENST00000591880 PPP2R1AP30153 589 aa14.86□□□□□ -0.03
GFAP-220ENST00000591880 KCNQ4P56696 695 aa14.86□□□□□ -0.03
GFAP-220ENST00000591880 PDGFDQ9GZP0 370 aaPredicted RBP14.86□□□□□ -0.03
GFAP-220ENST00000591880 SCN11AQ9UI33 1791 aa14.85□□□□□ -0.03
GFAP-220ENST00000591880 POLD1P28340 1107 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms