RNA–Protein interactions for RNA: ENST00000591798.5

DNMT1-225, Transcript of DNA methyltransferase 1, humanhuman

TSL 3

Gene DNMT1, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-225ENST00000591798 NSD2O96028 1365 aa12.42□□□□□ -0.42
DNMT1-225ENST00000591798 USP31Q70CQ4 1352 aa12.42□□□□□ -0.42
DNMT1-225ENST00000591798 ANKRD36BQ8N2N9 1353 aa12.42□□□□□ -0.42
DNMT1-225ENST00000591798 C5P01031 1676 aa12.42□□□□□ -0.42
DNMT1-225ENST00000591798 KIF3CO14782 793 aa12.41□□□□□ -0.42
DNMT1-225ENST00000591798 PRIM1P49642 420 aaKnown RBP12.41□□□□□ -0.42
DNMT1-225ENST00000591798 MSL1Q68DK7 614 aa12.41□□□□□ -0.42
DNMT1-225ENST00000591798 PPP4R3CPQ6ZMV5 832 aa12.41□□□□□ -0.42
DNMT1-225ENST00000591798 SYTL4Q96C24 671 aaPredicted RBP12.41□□□□□ -0.42
DNMT1-225ENST00000591798 CCNL1Q9UK58 526 aaPredicted RBP12.41□□□□□ -0.42
DNMT1-225ENST00000591798 TAF1LQ8IZX4 1826 aa12.41□□□□□ -0.42
DNMT1-225ENST00000591798 APLP1P51693 650 aa12.4□□□□□ -0.42
DNMT1-225ENST00000591798 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.38□□□□□ -0.43
DNMT1-225ENST00000591798 DNAJC5GQ8N7S2 189 aa12.38□□□□□ -0.43
DNMT1-225ENST00000591798 RGPD2P0DJD1 1756 aa12.38□□□□□ -0.43
DNMT1-225ENST00000591798 WDR90Q96KV7 1748 aa12.37□□□□□ -0.43
DNMT1-225ENST00000591798 NME9Q86XW9 330 aa12.37□□□□□ -0.43
DNMT1-225ENST00000591798 PCNTO95613 3336 aa12.37□□□□□ -0.43
DNMT1-225ENST00000591798 CICQ96RK0 1608 aaPredicted RBP12.37□□□□□ -0.43
DNMT1-225ENST00000591798 USP47Q96K76 1375 aa12.36□□□□□ -0.43
DNMT1-225ENST00000591798 IGSF1Q8N6C5 1336 aa12.36□□□□□ -0.43
DNMT1-225ENST00000591798 CD163L1Q9NR16 1453 aa12.35□□□□□ -0.43
DNMT1-225ENST00000591798 SBNO2Q9Y2G9 1366 aa12.35□□□□□ -0.43
DNMT1-225ENST00000591798 UBR3Q6ZT12 1888 aa12.35□□□□□ -0.43
DNMT1-225ENST00000591798 TOGARAM1Q9Y4F4 1720 aa12.34□□□□□ -0.43
DNMT1-225ENST00000591798 FLAD1Q8NFF5 587 aa12.34□□□□□ -0.43
DNMT1-225ENST00000591798 IP6K1Q92551 441 aa12.34□□□□□ -0.43
DNMT1-225ENST00000591798 MEGF6O75095 1541 aa12.33□□□□□ -0.44
DNMT1-225ENST00000591798 TOMM70O94826 608 aa12.33□□□□□ -0.44
DNMT1-225ENST00000591798 ZCRB1Q8TBF4 217 aaKnown RBP12.33□□□□□ -0.44
DNMT1-225ENST00000591798 LTV1Q96GA3 475 aaPredicted RBP12.33□□□□□ -0.44
DNMT1-225ENST00000591798 WWC3Q9ULE0 1092 aa12.33□□□□□ -0.44
DNMT1-225ENST00000591798 C4BP0C0L5 1744 aa12.33□□□□□ -0.44
DNMT1-225ENST00000591798 COL13A1Q5TAT6 717 aaPredicted RBP12.32□□□□□ -0.44
DNMT1-225ENST00000591798 EDC4Q6P2E9 1401 aaKnown RBP12.31□□□□□ -0.44
DNMT1-225ENST00000591798 HMGB2P26583 209 aaKnown RBP12.31□□□□□ -0.44
DNMT1-225ENST00000591798 KIF13BQ9NQT8 1826 aa12.31□□□□□ -0.44
DNMT1-225ENST00000591798 ITGB4P16144 1822 aa12.3□□□□□ -0.44
DNMT1-225ENST00000591798 CAPN15O75808 1086 aa12.3□□□□□ -0.44
DNMT1-225ENST00000591798 HOXD11P31277 338 aaPredicted RBP12.3□□□□□ -0.44
DNMT1-225ENST00000591798 KIAA1551Q9HCM1 1747 aa12.3□□□□□ -0.44
DNMT1-225ENST00000591798 N4BP2Q86UW6 1770 aaPredicted RBP12.3□□□□□ -0.44
DNMT1-225ENST00000591798 PALLDQ8WX93 1383 aa12.3□□□□□ -0.44
DNMT1-225ENST00000591798 AMIGO3Q86WK7 504 aa12.29□□□□□ -0.44
DNMT1-225ENST00000591798 JMYQ8N9B5 988 aa12.29□□□□□ -0.44
DNMT1-225ENST00000591798 KLRG1Q96E93 195 aa12.29□□□□□ -0.44
DNMT1-225ENST00000591798 ROCK2O75116 1388 aaKnown RBP12.29□□□□□ -0.44
DNMT1-225ENST00000591798 HDGFL2Q7Z4V5 671 aaPredicted RBP12.28□□□□□ -0.44
DNMT1-225ENST00000591798 AK7Q96M32 723 aa12.28□□□□□ -0.44
DNMT1-225ENST00000591798 NSD3Q9BZ95 1437 aa12.28□□□□□ -0.44
DNMT1-225ENST00000591798 BRCA1P38398 1863 aaKnown RBP12.27□□□□□ -0.44
DNMT1-225ENST00000591798 HOXC9P31274 260 aa12.27□□□□□ -0.45
DNMT1-225ENST00000591798 PRELPP51888 382 aa12.27□□□□□ -0.45
DNMT1-225ENST00000591798 NMRK2Q9NPI5 230 aa12.27□□□□□ -0.45
DNMT1-225ENST00000591798 CGNL1Q0VF96 1302 aa12.27□□□□□ -0.45
DNMT1-225ENST00000591798 MAP2P11137 1827 aaKnown RBP12.27□□□□□ -0.45
DNMT1-225ENST00000591798 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.26□□□□□ -0.45
DNMT1-225ENST00000591798 PHF14O94880 888 aa12.26□□□□□ -0.45
DNMT1-225ENST00000591798 HTRA3P83110 453 aa12.26□□□□□ -0.45
DNMT1-225ENST00000591798 TNS4Q8IZW8 715 aa12.26□□□□□ -0.45
DNMT1-225ENST00000591798 RBM46Q8TBY0 533 aaKnown RBP12.26□□□□□ -0.45
DNMT1-225ENST00000591798 TMC1Q8TDI8 760 aa12.26□□□□□ -0.45
DNMT1-225ENST00000591798 L3MBTL2Q969R5 705 aa12.26□□□□□ -0.45
DNMT1-225ENST00000591798 SLC12A5Q9H2X9 1139 aa12.26□□□□□ -0.45
DNMT1-225ENST00000591798 MAP3K19Q56UN5 1328 aa12.26□□□□□ -0.45
DNMT1-225ENST00000591798 A0A1W2PP64 1363 aa12.26□□□□□ -0.45
DNMT1-225ENST00000591798 PXDNLA1KZ92 1463 aa12.26□□□□□ -0.45
DNMT1-225ENST00000591798 SMIM5Q71RC9 77 aa12.25□□□□□ -0.45
DNMT1-225ENST00000591798 PKD1L3Q7Z443 1732 aa12.25□□□□□ -0.45
DNMT1-225ENST00000591798 SSFA2P28290 1259 aa12.24□□□□□ -0.45
DNMT1-225ENST00000591798 AMPHP49418 695 aa12.24□□□□□ -0.45
DNMT1-225ENST00000591798 NBPF6Q5VWK0 638 aa12.24□□□□□ -0.45
DNMT1-225ENST00000591798 MPRIPQ6WCQ1 1025 aa12.24□□□□□ -0.45
DNMT1-225ENST00000591798 CNKSR2Q8WXI2 1034 aa12.24□□□□□ -0.45
DNMT1-225ENST00000591798 NBPF4Q96M43 638 aa12.24□□□□□ -0.45
DNMT1-225ENST00000591798 PCDH11XQ9BZA7 1347 aa12.24□□□□□ -0.45
DNMT1-225ENST00000591798 PCDH11YQ9BZA8 1340 aa12.24□□□□□ -0.45
DNMT1-225ENST00000591798 TERF2IPQ9NYB0 399 aa12.24□□□□□ -0.45
DNMT1-225ENST00000591798 ARFGEF1Q9Y6D6 1849 aa12.24□□□□□ -0.45
DNMT1-225ENST00000591798 RTL1A6NKG5 1358 aa12.23□□□□□ -0.45
DNMT1-225ENST00000591798 FSTL1Q12841 308 aa12.23□□□□□ -0.45
DNMT1-225ENST00000591798 USHBP1Q8N6Y0 703 aa12.23□□□□□ -0.45
DNMT1-225ENST00000591798 RAPGEF4Q8WZA2 1011 aa12.23□□□□□ -0.45
DNMT1-225ENST00000591798 SMARCC1Q92922 1105 aaPredicted RBP12.23□□□□□ -0.45
DNMT1-225ENST00000591798 FBLN1P23142 703 aa12.22□□□□□ -0.45
DNMT1-225ENST00000591798 TGFB2P61812 414 aa12.22□□□□□ -0.45
DNMT1-225ENST00000591798 C16orf71Q8IYS4 520 aaPredicted RBP12.22□□□□□ -0.45
DNMT1-225ENST00000591798 COG3Q96JB2 828 aa12.22□□□□□ -0.45
DNMT1-225ENST00000591798 BCS1LQ9Y276 419 aa12.22□□□□□ -0.45
DNMT1-225ENST00000591798 PLEKHG2Q9H7P9 1386 aa12.21□□□□□ -0.45
DNMT1-225ENST00000591798 MMP10P09238 476 aa12.21□□□□□ -0.45
DNMT1-225ENST00000591798 TATP17735 454 aaPredicted RBP12.21□□□□□ -0.45
DNMT1-225ENST00000591798 ARHGAP27Q6ZUM4 889 aa12.21□□□□□ -0.45
DNMT1-225ENST00000591798 LINC00116Q8NCU8 138 aa12.21□□□□□ -0.45
DNMT1-225ENST00000591798 TNRC6CQ9HCJ0 1690 aaKnown RBP12.21□□□□□ -0.45
DNMT1-225ENST00000591798 SBF1O95248 1867 aa12.21□□□□□ -0.46
DNMT1-225ENST00000591798 C10orf71Q711Q0 1435 aa12.2□□□□□ -0.46
DNMT1-225ENST00000591798 SMG6Q86US8 1419 aaKnown RBP12.2□□□□□ -0.46
DNMT1-225ENST00000591798 A0A0G2JLW4 131 aa12.2□□□□□ -0.46
DNMT1-225ENST00000591798 CYP27B1O15528 508 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms