RNA–Protein interactions for RNA: ENST00000591547.5

RETREG3-211, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-211ENST00000591547 MSL1Q68DK7 614 aa14.04□□□□□ -0.16
RETREG3-211ENST00000591547 SLC16A10Q8TF71 515 aa14.04□□□□□ -0.16
RETREG3-211ENST00000591547 SLC12A5Q9H2X9 1139 aa14.04□□□□□ -0.16
RETREG3-211ENST00000591547 MSH5O43196 834 aa14.03□□□□□ -0.16
RETREG3-211ENST00000591547 SLC27A3Q5K4L6 730 aa14.03□□□□□ -0.16
RETREG3-211ENST00000591547 NSD2O96028 1365 aa14.03□□□□□ -0.16
RETREG3-211ENST00000591547 COL23A1Q86Y22 540 aaPredicted RBP14.02□□□□□ -0.17
RETREG3-211ENST00000591547 PCGF6Q9BYE7 350 aa14.02□□□□□ -0.17
RETREG3-211ENST00000591547 FAM208AQ9UK61 1670 aaKnown RBP14.01□□□□□ -0.17
RETREG3-211ENST00000591547 ATP10DQ9P241 1426 aa14□□□□□ -0.17
RETREG3-211ENST00000591547 IP6K1Q92551 441 aa14□□□□□ -0.17
RETREG3-211ENST00000591547 CCNL1Q9UK58 526 aaPredicted RBP14□□□□□ -0.17
RETREG3-211ENST00000591547 WWC3Q9ULE0 1092 aa14□□□□□ -0.17
RETREG3-211ENST00000591547 ANKRD36BQ8N2N9 1353 aa13.99□□□□□ -0.17
RETREG3-211ENST00000591547 ZNF526Q8TF50 670 aaPredicted RBP13.99□□□□□ -0.17
RETREG3-211ENST00000591547 MEGF6O75095 1541 aa13.99□□□□□ -0.17
RETREG3-211ENST00000591547 A0A1W2PP64 1363 aa13.98□□□□□ -0.17
RETREG3-211ENST00000591547 SMIM5Q71RC9 77 aa13.98□□□□□ -0.17
RETREG3-211ENST00000591547 HDGFL2Q7Z4V5 671 aaPredicted RBP13.98□□□□□ -0.17
RETREG3-211ENST00000591547 GRIN3BO60391 1043 aa13.97□□□□□ -0.17
RETREG3-211ENST00000591547 USHBP1Q8N6Y0 703 aa13.97□□□□□ -0.17
RETREG3-211ENST00000591547 ZCRB1Q8TBF4 217 aaKnown RBP13.97□□□□□ -0.17
RETREG3-211ENST00000591547 EDC4Q6P2E9 1401 aaKnown RBP13.97□□□□□ -0.17
RETREG3-211ENST00000591547 MAP3K19Q56UN5 1328 aa13.96□□□□□ -0.17
RETREG3-211ENST00000591547 C5P01031 1676 aa13.96□□□□□ -0.17
RETREG3-211ENST00000591547 HOXC9P31274 260 aa13.96□□□□□ -0.17
RETREG3-211ENST00000591547 TAF1LQ8IZX4 1826 aa13.94□□□□□ -0.18
RETREG3-211ENST00000591547 AMIGO3Q86WK7 504 aa13.94□□□□□ -0.18
RETREG3-211ENST00000591547 CARD11Q9BXL7 1154 aa13.94□□□□□ -0.18
RETREG3-211ENST00000591547 AMPHP49418 695 aa13.93□□□□□ -0.18
RETREG3-211ENST00000591547 NBPF6Q5VWK0 638 aa13.93□□□□□ -0.18
RETREG3-211ENST00000591547 NBPF4Q96M43 638 aa13.93□□□□□ -0.18
RETREG3-211ENST00000591547 GPBP1L1Q9HC44 474 aaPredicted RBP13.93□□□□□ -0.18
RETREG3-211ENST00000591547 TERF2IPQ9NYB0 399 aa13.93□□□□□ -0.18
RETREG3-211ENST00000591547 USP47Q96K76 1375 aa13.93□□□□□ -0.18
RETREG3-211ENST00000591547 RRS1Q15050 365 aaKnown RBP13.92□□□□□ -0.18
RETREG3-211ENST00000591547 TOGARAM1Q9Y4F4 1720 aa13.92□□□□□ -0.18
RETREG3-211ENST00000591547 ADCY9O60503 1353 aa13.91□□□□□ -0.18
RETREG3-211ENST00000591547 HSPA6P17066 643 aa13.9□□□□□ -0.18
RETREG3-211ENST00000591547 COG3Q96JB2 828 aa13.9□□□□□ -0.18
RETREG3-211ENST00000591547 CD2APQ9Y5K6 639 aa13.9□□□□□ -0.18
RETREG3-211ENST00000591547 ITGB4P16144 1822 aa13.9□□□□□ -0.18
RETREG3-211ENST00000591547 PHF14O94880 888 aa13.89□□□□□ -0.19
RETREG3-211ENST00000591547 MPRIPQ6WCQ1 1025 aa13.89□□□□□ -0.19
RETREG3-211ENST00000591547 C4BP0C0L5 1744 aa13.89□□□□□ -0.19
RETREG3-211ENST00000591547 IGSF1Q8N6C5 1336 aa13.89□□□□□ -0.19
RETREG3-211ENST00000591547 PALLDQ8WX93 1383 aa13.88□□□□□ -0.19
RETREG3-211ENST00000591547 UBR3Q6ZT12 1888 aa13.88□□□□□ -0.19
RETREG3-211ENST00000591547 GGNBP2Q9H3C7 697 aa13.87□□□□□ -0.19
RETREG3-211ENST00000591547 KIF3CO14782 793 aa13.86□□□□□ -0.19
RETREG3-211ENST00000591547 HSP90AB2PQ58FF8 381 aa13.86□□□□□ -0.19
RETREG3-211ENST00000591547 RAPGEF4Q8WZA2 1011 aa13.86□□□□□ -0.19
RETREG3-211ENST00000591547 CYP27B1O15528 508 aa13.85□□□□□ -0.19
RETREG3-211ENST00000591547 TATP17735 454 aaPredicted RBP13.85□□□□□ -0.19
RETREG3-211ENST00000591547 AK7Q96M32 723 aa13.85□□□□□ -0.19
RETREG3-211ENST00000591547 TESK2Q96S53 571 aa13.85□□□□□ -0.19
RETREG3-211ENST00000591547 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.84□□□□□ -0.19
RETREG3-211ENST00000591547 MAP2P11137 1827 aaKnown RBP13.83□□□□□ -0.2
RETREG3-211ENST00000591547 ST20-MTHFSA0A0A6YYL1 179 aa13.83□□□□□ -0.2
RETREG3-211ENST00000591547 FYB1O15117 783 aa13.83□□□□□ -0.2
RETREG3-211ENST00000591547 LINC00116Q8NCU8 138 aa13.83□□□□□ -0.2
RETREG3-211ENST00000591547 FLAD1Q8NFF5 587 aa13.83□□□□□ -0.2
RETREG3-211ENST00000591547 PIGBQ92521 554 aa13.83□□□□□ -0.2
RETREG3-211ENST00000591547 N4BP2Q86UW6 1770 aaPredicted RBP13.83□□□□□ -0.2
RETREG3-211ENST00000591547 RTL1A6NKG5 1358 aa13.83□□□□□ -0.2
RETREG3-211ENST00000591547 PUS7Q96PZ0 661 aaKnown RBP13.82□□□□□ -0.2
RETREG3-211ENST00000591547 PCDH11XQ9BZA7 1347 aa13.82□□□□□ -0.2
RETREG3-211ENST00000591547 PCDH11YQ9BZA8 1340 aa13.82□□□□□ -0.2
RETREG3-211ENST00000591547 KIAA1551Q9HCM1 1747 aa13.81□□□□□ -0.2
RETREG3-211ENST00000591547 CGNL1Q0VF96 1302 aa13.81□□□□□ -0.2
RETREG3-211ENST00000591547 ITPK1Q13572 414 aa13.8□□□□□ -0.2
RETREG3-211ENST00000591547 PKD1L3Q7Z443 1732 aa13.8□□□□□ -0.2
RETREG3-211ENST00000591547 KIF20BQ96Q89 1820 aa13.8□□□□□ -0.2
RETREG3-211ENST00000591547 SMG6Q86US8 1419 aaKnown RBP13.8□□□□□ -0.2
RETREG3-211ENST00000591547 EMILIN1Q9Y6C2 1016 aa13.79□□□□□ -0.2
RETREG3-211ENST00000591547 INSRP06213 1382 aa13.79□□□□□ -0.2
RETREG3-211ENST00000591547 A0A0G2JLW4 131 aa13.78□□□□□ -0.2
RETREG3-211ENST00000591547 HTRA3P83110 453 aa13.78□□□□□ -0.2
RETREG3-211ENST00000591547 DNAJC5GQ8N7S2 189 aa13.78□□□□□ -0.2
RETREG3-211ENST00000591547 SMARCC1Q92922 1105 aaPredicted RBP13.78□□□□□ -0.2
RETREG3-211ENST00000591547 ASAP1Q9ULH1 1129 aa13.78□□□□□ -0.2
RETREG3-211ENST00000591547 CICQ96RK0 1608 aaPredicted RBP13.78□□□□□ -0.2
RETREG3-211ENST00000591547 LOC102724428A0A0B4J2F2 783 aa13.77□□□□□ -0.21
RETREG3-211ENST00000591547 PXDNLA1KZ92 1463 aa13.77□□□□□ -0.21
RETREG3-211ENST00000591547 GNPATO15228 680 aa13.77□□□□□ -0.21
RETREG3-211ENST00000591547 MMP10P09238 476 aa13.77□□□□□ -0.21
RETREG3-211ENST00000591547 SSFA2P28290 1259 aa13.77□□□□□ -0.21
RETREG3-211ENST00000591547 SIK1P57059 783 aa13.77□□□□□ -0.21
RETREG3-211ENST00000591547 NMRK2Q9NPI5 230 aa13.77□□□□□ -0.21
RETREG3-211ENST00000591547 KIF13BQ9NQT8 1826 aa13.76□□□□□ -0.21
RETREG3-211ENST00000591547 FLT4P35916 1363 aa13.76□□□□□ -0.21
RETREG3-211ENST00000591547 CLSPNQ9HAW4 1339 aa13.76□□□□□ -0.21
RETREG3-211ENST00000591547 BCS1LQ9Y276 419 aa13.76□□□□□ -0.21
RETREG3-211ENST00000591547 TONSLQ96HA7 1378 aa13.75□□□□□ -0.21
RETREG3-211ENST00000591547 PPM1GO15355 546 aaPredicted RBP13.75□□□□□ -0.21
RETREG3-211ENST00000591547 ATP6V1AP38606 617 aa13.75□□□□□ -0.21
RETREG3-211ENST00000591547 ARHGAP27Q6ZUM4 889 aa13.75□□□□□ -0.21
RETREG3-211ENST00000591547 APLP1P51693 650 aa13.74□□□□□ -0.21
RETREG3-211ENST00000591547 NKX1-1Q15270 411 aaPredicted RBP13.74□□□□□ -0.21
RETREG3-211ENST00000591547 ATG3Q9NT62 314 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms