RNA–Protein interactions for RNA: ENST00000591421.5

CELF4-219, Transcript of CUGBP Elav-like family member 4, humanhuman

TSL 1 (best)

Gene CELF4, Length 675 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CELF4-219ENST00000591421 PTF1AQ7RTS3 328 aa14.03□□□□□ -0.16
CELF4-219ENST00000591421 RGPD1P0DJD0 1748 aa14.03□□□□□ -0.16
CELF4-219ENST00000591421 TNS1Q9HBL0 1735 aaKnown RBP14.03□□□□□ -0.16
CELF4-219ENST00000591421 PPP2R1AP30153 589 aa14.02□□□□□ -0.17
CELF4-219ENST00000591421 LRP5O75197 1615 aa14.01□□□□□ -0.17
CELF4-219ENST00000591421 MTHFSP49914 203 aa14.01□□□□□ -0.17
CELF4-219ENST00000591421 EN1Q05925 392 aaPredicted RBP14.01□□□□□ -0.17
CELF4-219ENST00000591421 ZCRB1Q8TBF4 217 aaKnown RBP14.01□□□□□ -0.17
CELF4-219ENST00000591421 RAPGEF4Q8WZA2 1011 aa14.01□□□□□ -0.17
CELF4-219ENST00000591421 IGSF1Q8N6C5 1336 aa14□□□□□ -0.17
CELF4-219ENST00000591421 TATP17735 454 aaPredicted RBP14□□□□□ -0.17
CELF4-219ENST00000591421 BAG6P46379 1132 aa14□□□□□ -0.17
CELF4-219ENST00000591421 DDX54Q8TDD1 881 aaKnown RBP14□□□□□ -0.17
CELF4-219ENST00000591421 SHANK3Q9BYB0 1731 aa13.99□□□□□ -0.17
CELF4-219ENST00000591421 APBA3O96018 575 aa13.99□□□□□ -0.17
CELF4-219ENST00000591421 IL13P35225 146 aa13.99□□□□□ -0.17
CELF4-219ENST00000591421 MRS2Q9HD23 443 aa13.99□□□□□ -0.17
CELF4-219ENST00000591421 SBF2Q86WG5 1849 aa13.99□□□□□ -0.17
CELF4-219ENST00000591421 KCNQ2O43526 872 aa13.98□□□□□ -0.17
CELF4-219ENST00000591421 ACSBG1Q96GR2 724 aa13.98□□□□□ -0.17
CELF4-219ENST00000591421 CAMKK2Q96RR4 588 aa13.98□□□□□ -0.17
CELF4-219ENST00000591421 BCL11BQ9C0K0 894 aaPredicted RBP13.98□□□□□ -0.17
CELF4-219ENST00000591421 EZH2Q15910 746 aaKnown RBP13.97□□□□□ -0.17
CELF4-219ENST00000591421 AEBP1Q8IUX7 1158 aa13.97□□□□□ -0.17
CELF4-219ENST00000591421 COL3A1P02461 1466 aaPredicted RBP13.97□□□□□ -0.17
CELF4-219ENST00000591421 CYP27B1O15528 508 aa13.96□□□□□ -0.17
CELF4-219ENST00000591421 PSDA5PKW4 1024 aaPredicted RBP13.95□□□□□ -0.18
CELF4-219ENST00000591421 CCDC184Q52MB2 194 aa13.95□□□□□ -0.18
CELF4-219ENST00000591421 PKD1L3Q7Z443 1732 aa13.95□□□□□ -0.18
CELF4-219ENST00000591421 KDRP35968 1356 aa13.95□□□□□ -0.18
CELF4-219ENST00000591421 NHSQ6T4R5 1651 aa13.95□□□□□ -0.18
CELF4-219ENST00000591421 PCDH11XQ9BZA7 1347 aa13.94□□□□□ -0.18
CELF4-219ENST00000591421 PCDH11YQ9BZA8 1340 aa13.94□□□□□ -0.18
CELF4-219ENST00000591421 SULT6B1Q6IMI4 303 aa13.94□□□□□ -0.18
CELF4-219ENST00000591421 DIAPH1O60610 1272 aaKnown RBP13.93□□□□□ -0.18
CELF4-219ENST00000591421 CFAP53Q96M91 514 aa13.93□□□□□ -0.18
CELF4-219ENST00000591421 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.93□□□□□ -0.18
CELF4-219ENST00000591421 PLEKHG2Q9H7P9 1386 aa13.93□□□□□ -0.18
CELF4-219ENST00000591421 PLSCR1O15162 318 aa13.92□□□□□ -0.18
CELF4-219ENST00000591421 PNISRQ8TF01 805 aaKnown RBP13.92□□□□□ -0.18
CELF4-219ENST00000591421 SPG7Q9UQ90 795 aa13.92□□□□□ -0.18
CELF4-219ENST00000591421 DOT1LQ8TEK3 1739 aa13.91□□□□□ -0.18
CELF4-219ENST00000591421 HMOX1P09601 288 aa13.91□□□□□ -0.18
CELF4-219ENST00000591421 PRIM1P49642 420 aaKnown RBP13.91□□□□□ -0.18
CELF4-219ENST00000591421 PROM2Q8N271 834 aa13.91□□□□□ -0.18
CELF4-219ENST00000591421 RREB1Q92766 1687 aa13.91□□□□□ -0.18
CELF4-219ENST00000591421 PHKG2P15735 406 aa13.9□□□□□ -0.18
CELF4-219ENST00000591421 NKX1-1Q15270 411 aaPredicted RBP13.9□□□□□ -0.18
CELF4-219ENST00000591421 SYTL4Q96C24 671 aaPredicted RBP13.9□□□□□ -0.18
CELF4-219ENST00000591421 KAT6BQ8WYB5 2073 aa13.9□□□□□ -0.18
CELF4-219ENST00000591421 RGPD3A6NKT7 1758 aaPredicted RBP13.89□□□□□ -0.19
CELF4-219ENST00000591421 RGPD4Q7Z3J3 1758 aa13.89□□□□□ -0.19
CELF4-219ENST00000591421 PLEKHO1Q53GL0 409 aaPredicted RBP13.89□□□□□ -0.19
CELF4-219ENST00000591421 IFNL2Q8IZJ0 200 aa13.89□□□□□ -0.19
CELF4-219ENST00000591421 BTAF1O14981 1849 aa13.89□□□□□ -0.19
CELF4-219ENST00000591421 NUP188Q5SRE5 1749 aa13.88□□□□□ -0.19
CELF4-219ENST00000591421 TOGARAM1Q9Y4F4 1720 aa13.88□□□□□ -0.19
CELF4-219ENST00000591421 U2SURPO15042 1029 aaKnown RBP13.88□□□□□ -0.19
CELF4-219ENST00000591421 TXNRD1Q16881 649 aa13.88□□□□□ -0.19
CELF4-219ENST00000591421 AMOTQ4VCS5 1084 aa13.88□□□□□ -0.19
CELF4-219ENST00000591421 ZNF530Q6P9A1 599 aaPredicted RBP13.87□□□□□ -0.19
CELF4-219ENST00000591421 WDR43Q15061 677 aaKnown RBP eCLIP13.86□□□□□ -0.19
CELF4-219ENST00000591421 FAM9BQ8IZU0 186 aa13.86□□□□□ -0.19
CELF4-219ENST00000591421 ANO8Q9HCE9 1232 aaPredicted RBP13.86□□□□□ -0.19
CELF4-219ENST00000591421 KDM6AO15550 1401 aaPredicted RBP13.85□□□□□ -0.19
CELF4-219ENST00000591421 R3HDM1Q15032 1099 aaKnown RBP13.85□□□□□ -0.19
CELF4-219ENST00000591421 MPRIPQ6WCQ1 1025 aa13.85□□□□□ -0.19
CELF4-219ENST00000591421 NUDCQ9Y266 331 aa13.85□□□□□ -0.19
CELF4-219ENST00000591421 PIGBQ92521 554 aa13.84□□□□□ -0.19
CELF4-219ENST00000591421 LRRC4BQ9NT99 713 aa13.84□□□□□ -0.19
CELF4-219ENST00000591421 MTHFSDQ2M296 383 aaKnown RBP13.83□□□□□ -0.2
CELF4-219ENST00000591421 DCAF5Q96JK2 942 aa13.83□□□□□ -0.2
CELF4-219ENST00000591421 RSPH6AQ9H0K4 717 aa13.83□□□□□ -0.2
CELF4-219ENST00000591421 HSP90AB1P08238 724 aaKnown RBP13.82□□□□□ -0.2
CELF4-219ENST00000591421 U2AF1L5P0DN76 240 aaPredicted RBP13.82□□□□□ -0.2
CELF4-219ENST00000591421 U2AF1Q01081 240 aaKnown RBP eCLIP13.82□□□□□ -0.2
CELF4-219ENST00000591421 C1orf141Q5JVX7 400 aa13.82□□□□□ -0.2
CELF4-219ENST00000591421 NBPF14Q5TI25 921 aa13.82□□□□□ -0.2
CELF4-219ENST00000591421 ITGB4P16144 1822 aa13.82□□□□□ -0.2
CELF4-219ENST00000591421 PRKAR2BP31323 418 aa13.81□□□□□ -0.2
CELF4-219ENST00000591421 KCNQ4P56696 695 aa13.81□□□□□ -0.2
CELF4-219ENST00000591421 AKAP4Q5JQC9 854 aa13.81□□□□□ -0.2
CELF4-219ENST00000591421 PHACTR3Q96KR7 559 aa13.81□□□□□ -0.2
CELF4-219ENST00000591421 TMOD3Q9NYL9 352 aa13.81□□□□□ -0.2
CELF4-219ENST00000591421 ADAMTS8Q9UP79 889 aa13.81□□□□□ -0.2
CELF4-219ENST00000591421 PAPPAQ13219 1627 aa13.81□□□□□ -0.2
CELF4-219ENST00000591421 PALLDQ8WX93 1383 aa13.81□□□□□ -0.2
CELF4-219ENST00000591421 ERVV-2B6SEH9 535 aa13.8□□□□□ -0.2
CELF4-219ENST00000591421 SLC27A3Q5K4L6 730 aa13.8□□□□□ -0.2
CELF4-219ENST00000591421 LY75O60449 1722 aa13.8□□□□□ -0.2
CELF4-219ENST00000591421 ZNF827Q17R98 1081 aa13.79□□□□□ -0.2
CELF4-219ENST00000591421 YTHDC1Q96MU7 727 aaKnown RBP13.79□□□□□ -0.2
CELF4-219ENST00000591421 CCNL1Q9UK58 526 aaPredicted RBP13.79□□□□□ -0.2
CELF4-219ENST00000591421 ASAP1Q9ULH1 1129 aa13.79□□□□□ -0.2
CELF4-219ENST00000591421 FCHSD2O94868 740 aa13.78□□□□□ -0.2
CELF4-219ENST00000591421 SLC15A2Q16348 729 aa13.78□□□□□ -0.2
CELF4-219ENST00000591421 SMARCC1Q92922 1105 aaPredicted RBP13.78□□□□□ -0.2
CELF4-219ENST00000591421 LGR6Q9HBX8 967 aa13.78□□□□□ -0.2
CELF4-219ENST00000591421 ATG3Q9NT62 314 aa13.78□□□□□ -0.2
CELF4-219ENST00000591421 STK32BQ9NY57 414 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms