RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 RGPD1P0DJD0 1748 aa15.67■□□□□ 0.1
VMP1-211ENST00000591315 AEBP1Q8IUX7 1158 aa15.66■□□□□ 0.1
VMP1-211ENST00000591315 ZCRB1Q8TBF4 217 aaKnown RBP15.66■□□□□ 0.1
VMP1-211ENST00000591315 RAPGEF4Q8WZA2 1011 aa15.66■□□□□ 0.1
VMP1-211ENST00000591315 ACSBG1Q96GR2 724 aa15.66■□□□□ 0.1
VMP1-211ENST00000591315 NCAPD2Q15021 1401 aa15.66■□□□□ 0.1
VMP1-211ENST00000591315 APBA3O96018 575 aa15.65■□□□□ 0.1
VMP1-211ENST00000591315 IL13P35225 146 aa15.65■□□□□ 0.1
VMP1-211ENST00000591315 TATP17735 454 aaPredicted RBP15.64■□□□□ 0.09
VMP1-211ENST00000591315 EZH2Q15910 746 aaKnown RBP15.64■□□□□ 0.09
VMP1-211ENST00000591315 BAG6P46379 1132 aa15.63■□□□□ 0.09
VMP1-211ENST00000591315 IGSF1Q8N6C5 1336 aa15.63■□□□□ 0.09
VMP1-211ENST00000591315 BCL9O00512 1426 aa15.62■□□□□ 0.09
VMP1-211ENST00000591315 CYP27B1O15528 508 aa15.62■□□□□ 0.09
VMP1-211ENST00000591315 CAMKK2Q96RR4 588 aa15.62■□□□□ 0.09
VMP1-211ENST00000591315 PPP2R1AP30153 589 aa15.61■□□□□ 0.09
VMP1-211ENST00000591315 BCL11BQ9C0K0 894 aaPredicted RBP15.61■□□□□ 0.09
VMP1-211ENST00000591315 COL3A1P02461 1466 aaPredicted RBP15.6■□□□□ 0.09
VMP1-211ENST00000591315 SULT6B1Q6IMI4 303 aa15.6■□□□□ 0.09
VMP1-211ENST00000591315 PKD1L3Q7Z443 1732 aa15.59■□□□□ 0.09
VMP1-211ENST00000591315 NHSQ6T4R5 1651 aa15.58■□□□□ 0.08
VMP1-211ENST00000591315 HMOX1P09601 288 aa15.58■□□□□ 0.08
VMP1-211ENST00000591315 PRIM1P49642 420 aaKnown RBP15.58■□□□□ 0.08
VMP1-211ENST00000591315 DOT1LQ8TEK3 1739 aa15.57■□□□□ 0.08
VMP1-211ENST00000591315 DIAPH1O60610 1272 aaKnown RBP15.57■□□□□ 0.08
VMP1-211ENST00000591315 PROM2Q8N271 834 aa15.57■□□□□ 0.08
VMP1-211ENST00000591315 BTAF1O14981 1849 aa15.57■□□□□ 0.08
VMP1-211ENST00000591315 SRCAPQ6ZRS2 3230 aa15.56■□□□□ 0.08
VMP1-211ENST00000591315 SYTL4Q96C24 671 aaPredicted RBP15.56■□□□□ 0.08
VMP1-211ENST00000591315 PCDH11XQ9BZA7 1347 aa15.56■□□□□ 0.08
VMP1-211ENST00000591315 PCDH11YQ9BZA8 1340 aa15.56■□□□□ 0.08
VMP1-211ENST00000591315 PARD3Q8TEW0 1356 aa15.56■□□□□ 0.08
VMP1-211ENST00000591315 TOGARAM1Q9Y4F4 1720 aa15.55■□□□□ 0.08
VMP1-211ENST00000591315 PSDA5PKW4 1024 aaPredicted RBP15.55■□□□□ 0.08
VMP1-211ENST00000591315 SPG7Q9UQ90 795 aa15.55■□□□□ 0.08
VMP1-211ENST00000591315 KDRP35968 1356 aa15.54■□□□□ 0.08
VMP1-211ENST00000591315 U2SURPO15042 1029 aaKnown RBP15.54■□□□□ 0.08
VMP1-211ENST00000591315 RREB1Q92766 1687 aa15.54■□□□□ 0.08
VMP1-211ENST00000591315 PLSCR1O15162 318 aa15.53■□□□□ 0.08
VMP1-211ENST00000591315 PHKG2P15735 406 aa15.53■□□□□ 0.08
VMP1-211ENST00000591315 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.53■□□□□ 0.089e-10■■□□□ 12.9
VMP1-211ENST00000591315 NUP188Q5SRE5 1749 aa15.53■□□□□ 0.08
VMP1-211ENST00000591315 ZNF316A6NFI3 1004 aaPredicted RBP15.52■□□□□ 0.08
VMP1-211ENST00000591315 KCNQ4P56696 695 aa15.52■□□□□ 0.08
VMP1-211ENST00000591315 NKX1-1Q15270 411 aaPredicted RBP15.52■□□□□ 0.08
VMP1-211ENST00000591315 TXNRD1Q16881 649 aa15.52■□□□□ 0.08
VMP1-211ENST00000591315 ZNF530Q6P9A1 599 aaPredicted RBP15.52■□□□□ 0.08
VMP1-211ENST00000591315 ITGB4P16144 1822 aa15.52■□□□□ 0.07
VMP1-211ENST00000591315 R3HDM1Q15032 1099 aaKnown RBP15.51■□□□□ 0.07
VMP1-211ENST00000591315 PLEKHO1Q53GL0 409 aaPredicted RBP15.51■□□□□ 0.07
VMP1-211ENST00000591315 MPRIPQ6WCQ1 1025 aa15.51■□□□□ 0.07
VMP1-211ENST00000591315 IFNL2Q8IZJ0 200 aa15.51■□□□□ 0.07
VMP1-211ENST00000591315 CFAP53Q96M91 514 aa15.5■□□□□ 0.07
VMP1-211ENST00000591315 ANO8Q9HCE9 1232 aaPredicted RBP15.5■□□□□ 0.07
VMP1-211ENST00000591315 LRRC4BQ9NT99 713 aa15.49■□□□□ 0.07
VMP1-211ENST00000591315 RGPD3A6NKT7 1758 aaPredicted RBP15.49■□□□□ 0.07
VMP1-211ENST00000591315 RGPD4Q7Z3J3 1758 aa15.49■□□□□ 0.07
VMP1-211ENST00000591315 MTHFSDQ2M296 383 aaKnown RBP15.48■□□□□ 0.07
VMP1-211ENST00000591315 PIGBQ92521 554 aa15.48■□□□□ 0.07
VMP1-211ENST00000591315 KDM6AO15550 1401 aaPredicted RBP15.48■□□□□ 0.07
VMP1-211ENST00000591315 U2AF1L5P0DN76 240 aaPredicted RBP15.47■□□□□ 0.07
VMP1-211ENST00000591315 U2AF1Q01081 240 aaKnown RBP eCLIP15.47■□□□□ 0.07
VMP1-211ENST00000591315 RALBP1Q15311 655 aa15.47■□□□□ 0.07
VMP1-211ENST00000591315 AMOTQ4VCS5 1084 aa15.47■□□□□ 0.07
VMP1-211ENST00000591315 PHACTR3Q96KR7 559 aa15.47■□□□□ 0.07
VMP1-211ENST00000591315 RSPH6AQ9H0K4 717 aa15.47■□□□□ 0.07
VMP1-211ENST00000591315 PRKAR2BP31323 418 aa15.45■□□□□ 0.06
VMP1-211ENST00000591315 PDGFDQ9GZP0 370 aaPredicted RBP15.45■□□□□ 0.06
VMP1-211ENST00000591315 LGR6Q9HBX8 967 aa15.45■□□□□ 0.06
VMP1-211ENST00000591315 LY75O60449 1722 aa15.44■□□□□ 0.06
VMP1-211ENST00000591315 C1orf141Q5JVX7 400 aa15.44■□□□□ 0.06
VMP1-211ENST00000591315 PRKRIP1Q9H875 184 aaPredicted RBP15.44■□□□□ 0.06
VMP1-211ENST00000591315 ASAP1Q9ULH1 1129 aa15.44■□□□□ 0.06
VMP1-211ENST00000591315 NUDCQ9Y266 331 aa15.44■□□□□ 0.06
VMP1-211ENST00000591315 PLEKHG2Q9H7P9 1386 aa15.44■□□□□ 0.06
VMP1-211ENST00000591315 ZNF827Q17R98 1081 aa15.43■□□□□ 0.06
VMP1-211ENST00000591315 DCAF5Q96JK2 942 aa15.43■□□□□ 0.06
VMP1-211ENST00000591315 TMOD3Q9NYL9 352 aa15.43■□□□□ 0.06
VMP1-211ENST00000591315 MYBBP1AQ9BQG0 1328 aaKnown RBP15.43■□□□□ 0.06
VMP1-211ENST00000591315 AKAP4Q5JQC9 854 aa15.42■□□□□ 0.06
VMP1-211ENST00000591315 NBPF14Q5TI25 921 aa15.42■□□□□ 0.06
VMP1-211ENST00000591315 ATG3Q9NT62 314 aa15.42■□□□□ 0.06
VMP1-211ENST00000591315 VIRMAQ69YN4 1812 aaKnown RBP15.42■□□□□ 0.06
VMP1-211ENST00000591315 PAPPAQ13219 1627 aa15.42■□□□□ 0.06
VMP1-211ENST00000591315 SCN11AQ9UI33 1791 aa15.41■□□□□ 0.06
VMP1-211ENST00000591315 PALLDQ8WX93 1383 aa15.41■□□□□ 0.06
VMP1-211ENST00000591315 ERVV-2B6SEH9 535 aa15.41■□□□□ 0.06
VMP1-211ENST00000591315 HSP90AB1P08238 724 aaKnown RBP15.41■□□□□ 0.06
VMP1-211ENST00000591315 CCNL1Q9UK58 526 aaPredicted RBP15.41■□□□□ 0.06
VMP1-211ENST00000591315 RNMTO43148 476 aaKnown RBP15.4■□□□□ 0.06
VMP1-211ENST00000591315 CABP4P57796 275 aa15.4■□□□□ 0.06
VMP1-211ENST00000591315 NFATC2IPQ8NCF5 419 aa15.4■□□□□ 0.06
VMP1-211ENST00000591315 FCHSD2O94868 740 aa15.39■□□□□ 0.05
VMP1-211ENST00000591315 SLC15A2Q16348 729 aa15.39■□□□□ 0.05
VMP1-211ENST00000591315 CCDC184Q52MB2 194 aa15.39■□□□□ 0.05
VMP1-211ENST00000591315 STK32BQ9NY57 414 aa15.39■□□□□ 0.05
VMP1-211ENST00000591315 SLC27A3Q5K4L6 730 aa15.38■□□□□ 0.05
VMP1-211ENST00000591315 SMIM5Q71RC9 77 aa15.38■□□□□ 0.05
VMP1-211ENST00000591315 IL17REQ8NFR9 667 aa15.38■□□□□ 0.05
VMP1-211ENST00000591315 AKT1S1Q96B36 256 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms