RNA–Protein interactions for RNA: ENST00000591157.1

TMED1-206, Transcript of transmembrane p24 trafficking protein 1, humanhuman

TSL 5

Gene TMED1, Length 717 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED1-206ENST00000591157 CFAP53Q96M91 514 aa22.23■■□□□ 1.15
TMED1-206ENST00000591157 TNS1Q9HBL0 1735 aaKnown RBP22.23■■□□□ 1.15
TMED1-206ENST00000591157 ZCRB1Q8TBF4 217 aaKnown RBP22.22■■□□□ 1.15
TMED1-206ENST00000591157 SBF2Q86WG5 1849 aa22.22■■□□□ 1.15
TMED1-206ENST00000591157 SULT6B1Q6IMI4 303 aa22.21■■□□□ 1.15
TMED1-206ENST00000591157 DDX54Q8TDD1 881 aaKnown RBP22.21■■□□□ 1.15
TMED1-206ENST00000591157 KDRP35968 1356 aa22.21■■□□□ 1.15
TMED1-206ENST00000591157 U2SURPO15042 1029 aaKnown RBP22.19■■□□□ 1.14
TMED1-206ENST00000591157 PRKRIP1Q9H875 184 aaPredicted RBP22.19■■□□□ 1.14
TMED1-206ENST00000591157 MYBBP1AQ9BQG0 1328 aaKnown RBP22.19■■□□□ 1.14
TMED1-206ENST00000591157 BCL9O00512 1426 aa22.18■■□□□ 1.14
TMED1-206ENST00000591157 TRIM37O94972 964 aa22.18■■□□□ 1.14
TMED1-206ENST00000591157 HMOX1P09601 288 aa22.18■■□□□ 1.14
TMED1-206ENST00000591157 PCDH11XQ9BZA7 1347 aa22.17■■□□□ 1.14
TMED1-206ENST00000591157 PCDH11YQ9BZA8 1340 aa22.17■■□□□ 1.14
TMED1-206ENST00000591157 DOT1LQ8TEK3 1739 aa22.17■■□□□ 1.14
TMED1-206ENST00000591157 NHSQ6T4R5 1651 aa22.16■■□□□ 1.14
TMED1-206ENST00000591157 PLEKHG2Q9H7P9 1386 aa22.14■■□□□ 1.14
TMED1-206ENST00000591157 CYP27B1O15528 508 aa22.14■■□□□ 1.13
TMED1-206ENST00000591157 PTF1AQ7RTS3 328 aa22.14■■□□□ 1.13
TMED1-206ENST00000591157 CCDC125Q86Z20 511 aa22.14■■□□□ 1.13
TMED1-206ENST00000591157 SPG7Q9UQ90 795 aa22.14■■□□□ 1.13
TMED1-206ENST00000591157 SF3B2Q13435 895 aaKnown RBP22.13■■□□□ 1.13
TMED1-206ENST00000591157 ACSBG1Q96GR2 724 aa22.13■■□□□ 1.13
TMED1-206ENST00000591157 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.13■■□□□ 1.13
TMED1-206ENST00000591157 TOGARAM1Q9Y4F4 1720 aa22.12■■□□□ 1.13
TMED1-206ENST00000591157 DEFB132Q7Z7B7 95 aa22.12■■□□□ 1.13
TMED1-206ENST00000591157 NUDCQ9Y266 331 aa22.12■■□□□ 1.13
TMED1-206ENST00000591157 KAT6BQ8WYB5 2073 aa22.11■■□□□ 1.13
TMED1-206ENST00000591157 KCNQ2O43526 872 aa22.1■■□□□ 1.13
TMED1-206ENST00000591157 U2AF1L5P0DN76 240 aaPredicted RBP22.1■■□□□ 1.13
TMED1-206ENST00000591157 U2AF1Q01081 240 aaKnown RBP eCLIP22.1■■□□□ 1.13
TMED1-206ENST00000591157 PLEKHO1Q53GL0 409 aaPredicted RBP22.1■■□□□ 1.13
TMED1-206ENST00000591157 BTAF1O14981 1849 aa22.08■■□□□ 1.13
TMED1-206ENST00000591157 PHKG2P15735 406 aa22.08■■□□□ 1.13
TMED1-206ENST00000591157 ZNF530Q6P9A1 599 aaPredicted RBP22.08■■□□□ 1.13
TMED1-206ENST00000591157 BCL11BQ9C0K0 894 aaPredicted RBP22.08■■□□□ 1.13
TMED1-206ENST00000591157 APBA3O96018 575 aa22.07■■□□□ 1.12
TMED1-206ENST00000591157 BAG6P46379 1132 aa22.07■■□□□ 1.12
TMED1-206ENST00000591157 AMOTQ4VCS5 1084 aa22.07■■□□□ 1.12
TMED1-206ENST00000591157 RSPH6AQ9H0K4 717 aa22.07■■□□□ 1.12
TMED1-206ENST00000591157 ANP32CO43423 234 aa22.06■■□□□ 1.12
TMED1-206ENST00000591157 PRKAR2BP31323 418 aa22.06■■□□□ 1.12
TMED1-206ENST00000591157 IFNL2Q8IZJ0 200 aa22.06■■□□□ 1.12
TMED1-206ENST00000591157 EN1Q05925 392 aaPredicted RBP22.05■■□□□ 1.12
TMED1-206ENST00000591157 SYTL4Q96C24 671 aaPredicted RBP22.05■■□□□ 1.12
TMED1-206ENST00000591157 ITGB4P16144 1822 aa22.04■■□□□ 1.12
TMED1-206ENST00000591157 PRIM1P49642 420 aaKnown RBP22.04■■□□□ 1.12
TMED1-206ENST00000591157 NKX1-1Q15270 411 aaPredicted RBP22.04■■□□□ 1.12
TMED1-206ENST00000591157 RGPD3A6NKT7 1758 aaPredicted RBP22.03■■□□□ 1.12
TMED1-206ENST00000591157 RGPD4Q7Z3J3 1758 aa22.03■■□□□ 1.12
TMED1-206ENST00000591157 KDM6AO15550 1401 aaPredicted RBP22.03■■□□□ 1.12
TMED1-206ENST00000591157 MTHFSDQ2M296 383 aaKnown RBP22.02■■□□□ 1.12
TMED1-206ENST00000591157 C1orf141Q5JVX7 400 aa22.02■■□□□ 1.12
TMED1-206ENST00000591157 RREB1Q92766 1687 aa22.01■■□□□ 1.11
TMED1-206ENST00000591157 FCHSD2O94868 740 aa22.01■■□□□ 1.11
TMED1-206ENST00000591157 PHACTR3Q96KR7 559 aa22.01■■□□□ 1.11
TMED1-206ENST00000591157 EZH2Q15910 746 aaKnown RBP22■■□□□ 1.11
TMED1-206ENST00000591157 CCDC184Q52MB2 194 aa22■■□□□ 1.11
TMED1-206ENST00000591157 VIRMAQ69YN4 1812 aaKnown RBP21.99■■□□□ 1.11
TMED1-206ENST00000591157 CAMKK2Q96RR4 588 aa21.99■■□□□ 1.11
TMED1-206ENST00000591157 SCN11AQ9UI33 1791 aa21.99■■□□□ 1.11
TMED1-206ENST00000591157 NUP188Q5SRE5 1749 aa21.98■■□□□ 1.11
TMED1-206ENST00000591157 HSP90AB1P08238 724 aaKnown RBP21.98■■□□□ 1.11
TMED1-206ENST00000591157 AKAP4Q5JQC9 854 aa21.98■■□□□ 1.11
TMED1-206ENST00000591157 MPRIPQ6WCQ1 1025 aa21.98■■□□□ 1.11
TMED1-206ENST00000591157 GAS2L2Q8NHY3 880 aa21.97■■□□□ 1.11
TMED1-206ENST00000591157 DCAF5Q96JK2 942 aa21.97■■□□□ 1.11
TMED1-206ENST00000591157 ADAMTS7Q9UKP4 1686 aa21.96■■□□□ 1.11
TMED1-206ENST00000591157 WDR43Q15061 677 aaKnown RBP eCLIP21.96■■□□□ 1.11
TMED1-206ENST00000591157 PLSCR1O15162 318 aa21.95■■□□□ 1.1
TMED1-206ENST00000591157 MAP3K5Q99683 1374 aa21.95■■□□□ 1.1
TMED1-206ENST00000591157 PIGBQ92521 554 aa21.94■■□□□ 1.1
TMED1-206ENST00000591157 PLEKHF1Q96S99 279 aa21.94■■□□□ 1.1
TMED1-206ENST00000591157 TMOD3Q9NYL9 352 aa21.94■■□□□ 1.1
TMED1-206ENST00000591157 LY75O60449 1722 aa21.93■■□□□ 1.1
TMED1-206ENST00000591157 MRC1P22897 1456 aa21.92■■□□□ 1.1
TMED1-206ENST00000591157 ERVV-2B6SEH9 535 aa21.92■■□□□ 1.1
TMED1-206ENST00000591157 LGR6Q9HBX8 967 aa21.92■■□□□ 1.1
TMED1-206ENST00000591157 DLG5Q8TDM6 1919 aa21.92■■□□□ 1.1
TMED1-206ENST00000591157 MAPK8IP3Q9UPT6 1336 aa21.91■■□□□ 1.1
TMED1-206ENST00000591157 GNAT3A8MTJ3 354 aa21.91■■□□□ 1.1
TMED1-206ENST00000591157 RNMTO43148 476 aaKnown RBP21.91■■□□□ 1.1
TMED1-206ENST00000591157 TXNRD1Q16881 649 aa21.91■■□□□ 1.1
TMED1-206ENST00000591157 CCDC146Q8IYE0 955 aa21.91■■□□□ 1.1
TMED1-206ENST00000591157 PROM2Q8N271 834 aa21.91■■□□□ 1.1
TMED1-206ENST00000591157 MRS2Q9HD23 443 aa21.91■■□□□ 1.1
TMED1-206ENST00000591157 ADAMTS8Q9UP79 889 aa21.91■■□□□ 1.1
TMED1-206ENST00000591157 NEFMP07197 916 aa21.9■■□□□ 1.1
TMED1-206ENST00000591157 CABP4P57796 275 aa21.9■■□□□ 1.1
TMED1-206ENST00000591157 PALLDQ8WX93 1383 aa21.89■■□□□ 1.1
TMED1-206ENST00000591157 PNNQ9H307 717 aaKnown RBP21.89■■□□□ 1.09
TMED1-206ENST00000591157 ASAP1Q9ULH1 1129 aa21.88■■□□□ 1.09
TMED1-206ENST00000591157 NFATC2IPQ8NCF5 419 aa21.87■■□□□ 1.09
TMED1-206ENST00000591157 PAPPAQ13219 1627 aa21.87■■□□□ 1.09
TMED1-206ENST00000591157 SIPA1L3O60292 1781 aaPredicted RBP21.87■■□□□ 1.09
TMED1-206ENST00000591157 KCNQ4P56696 695 aa21.86■■□□□ 1.09
TMED1-206ENST00000591157 NFE2L2Q16236 605 aa21.86■■□□□ 1.09
TMED1-206ENST00000591157 IL17REQ8NFR9 667 aa21.86■■□□□ 1.09
TMED1-206ENST00000591157 SLC52A2Q9HAB3 445 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms