RNA–Protein interactions for RNA: ENST00000591115.5

PTPN2-210, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 1,648 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-210ENST00000591115 NFE2L2Q16236 605 aa12.89□□□□□ -0.35
PTPN2-210ENST00000591115 SPATA31A6Q5VVP1 1343 aa12.89□□□□□ -0.35
PTPN2-210ENST00000591115 PDE3AQ14432 1141 aa12.88□□□□□ -0.35
PTPN2-210ENST00000591115 CRBNQ96SW2 442 aa12.88□□□□□ -0.35
PTPN2-210ENST00000591115 AXIN2Q9Y2T1 843 aa12.88□□□□□ -0.35
PTPN2-210ENST00000591115 COL5A2P05997 1499 aaPredicted RBP12.88□□□□□ -0.35
PTPN2-210ENST00000591115 LMOD3Q0VAK6 560 aa12.88□□□□□ -0.35
PTPN2-210ENST00000591115 IP6K1Q92551 441 aa12.88□□□□□ -0.35
PTPN2-210ENST00000591115 FAM83GA6ND36 823 aa12.87□□□□□ -0.35
PTPN2-210ENST00000591115 RARSP54136 660 aaKnown RBP12.87□□□□□ -0.35
PTPN2-210ENST00000591115 EIF4A2Q14240 407 aaKnown RBP12.87□□□□□ -0.35
PTPN2-210ENST00000591115 LTV1Q96GA3 475 aaPredicted RBP12.87□□□□□ -0.35
PTPN2-210ENST00000591115 WNK3Q9BYP7 1800 aa12.86□□□□□ -0.35
PTPN2-210ENST00000591115 FANCIQ9NVI1 1328 aa12.86□□□□□ -0.35
PTPN2-210ENST00000591115 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.86□□□□□ -0.35
PTPN2-210ENST00000591115 BCAR3O75815 825 aa12.85□□□□□ -0.35
PTPN2-210ENST00000591115 HMOX1P09601 288 aa12.85□□□□□ -0.35
PTPN2-210ENST00000591115 ERBB3P21860 1342 aa12.85□□□□□ -0.35
PTPN2-210ENST00000591115 SLIT2O94813 1529 aa12.84□□□□□ -0.35
PTPN2-210ENST00000591115 C20orf194Q5TEA3 1177 aa12.84□□□□□ -0.35
PTPN2-210ENST00000591115 ANKRD24Q8TF21 1146 aa12.84□□□□□ -0.35
PTPN2-210ENST00000591115 AAMPQ13685 434 aa12.84□□□□□ -0.35
PTPN2-210ENST00000591115 ZNF428Q96B54 188 aa12.84□□□□□ -0.35
PTPN2-210ENST00000591115 PHACTR3Q96KR7 559 aa12.84□□□□□ -0.35
PTPN2-210ENST00000591115 C8orf37Q96NL8 207 aa12.84□□□□□ -0.35
PTPN2-210ENST00000591115 BTG4Q9NY30 223 aa12.84□□□□□ -0.35
PTPN2-210ENST00000591115 MEX3CQ5U5Q3 659 aaKnown RBP12.82□□□□□ -0.36
PTPN2-210ENST00000591115 USHBP1Q8N6Y0 703 aa12.82□□□□□ -0.36
PTPN2-210ENST00000591115 STRN4Q9NRL3 753 aa12.82□□□□□ -0.36
PTPN2-210ENST00000591115 MS4A1P11836 297 aa12.81□□□□□ -0.36
PTPN2-210ENST00000591115 GNAI1P63096 354 aa12.81□□□□□ -0.36
PTPN2-210ENST00000591115 SULT6B1Q6IMI4 303 aa12.81□□□□□ -0.36
PTPN2-210ENST00000591115 AEBP1Q8IUX7 1158 aa12.81□□□□□ -0.36
PTPN2-210ENST00000591115 IFT57Q9NWB7 429 aa12.81□□□□□ -0.36
PTPN2-210ENST00000591115 IGSF1Q8N6C5 1336 aa12.81□□□□□ -0.36
PTPN2-210ENST00000591115 KDRP35968 1356 aa12.81□□□□□ -0.36
PTPN2-210ENST00000591115 NCAPD2Q15021 1401 aa12.81□□□□□ -0.36
PTPN2-210ENST00000591115 CSB-PGBD3P0DP91 1061 aa12.8□□□□□ -0.36
PTPN2-210ENST00000591115 CANXP27824 592 aaKnown RBP12.8□□□□□ -0.36
PTPN2-210ENST00000591115 EXOSC9Q06265 439 aaKnown RBP12.8□□□□□ -0.36
PTPN2-210ENST00000591115 TSR2Q969E8 191 aaKnown RBP12.8□□□□□ -0.36
PTPN2-210ENST00000591115 EYA1Q99502 592 aa12.8□□□□□ -0.36
PTPN2-210ENST00000591115 PARP4Q9UKK3 1724 aaKnown RBP12.8□□□□□ -0.36
PTPN2-210ENST00000591115 BCL9LQ86UU0 1499 aa12.8□□□□□ -0.36
PTPN2-210ENST00000591115 WDR17Q8IZU2 1322 aa12.8□□□□□ -0.36
PTPN2-210ENST00000591115 ZNF853P0CG23 659 aa12.8□□□□□ -0.36
PTPN2-210ENST00000591115 NBPF6Q5VWK0 638 aa12.8□□□□□ -0.36
PTPN2-210ENST00000591115 LARP1Q6PKG0 1096 aaKnown RBP12.8□□□□□ -0.36
PTPN2-210ENST00000591115 NBPF4Q96M43 638 aa12.8□□□□□ -0.36
PTPN2-210ENST00000591115 DLG5Q8TDM6 1919 aa12.79□□□□□ -0.36
PTPN2-210ENST00000591115 CRB1P82279 1406 aa12.79□□□□□ -0.36
PTPN2-210ENST00000591115 ALDH1L2Q3SY69 923 aa12.79□□□□□ -0.36
PTPN2-210ENST00000591115 NGLY1Q96IV0 654 aa12.79□□□□□ -0.36
PTPN2-210ENST00000591115 NLRP2Q9NX02 1062 aa12.79□□□□□ -0.36
PTPN2-210ENST00000591115 MEGF6O75095 1541 aa12.79□□□□□ -0.36
PTPN2-210ENST00000591115 PKD1L3Q7Z443 1732 aa12.78□□□□□ -0.36
PTPN2-210ENST00000591115 SHANK3Q9BYB0 1731 aa12.78□□□□□ -0.36
PTPN2-210ENST00000591115 BRPF1P55201 1214 aaPredicted RBP12.78□□□□□ -0.36
PTPN2-210ENST00000591115 CENPQQ7L2Z9 268 aaPredicted RBP12.78□□□□□ -0.36
PTPN2-210ENST00000591115 CFAP44Q96MT7 982 aa12.78□□□□□ -0.36
PTPN2-210ENST00000591115 AFF2P51816 1311 aa12.77□□□□□ -0.36
PTPN2-210ENST00000591115 KDM2BQ8NHM5 1336 aa12.77□□□□□ -0.36
PTPN2-210ENST00000591115 TOM1L2Q6ZVM7 507 aa12.77□□□□□ -0.36
PTPN2-210ENST00000591115 RBM19Q9Y4C8 960 aaKnown RBP12.77□□□□□ -0.36
PTPN2-210ENST00000591115 EVA1CP58658 441 aa12.77□□□□□ -0.37
PTPN2-210ENST00000591115 ZKSCAN2Q63HK3 967 aa12.77□□□□□ -0.37
PTPN2-210ENST00000591115 ILDR1Q86SU0 546 aaPredicted RBP12.77□□□□□ -0.37
PTPN2-210ENST00000591115 FRAT1Q92837 279 aaPredicted RBP12.77□□□□□ -0.37
PTPN2-210ENST00000591115 VIRMAQ69YN4 1812 aaKnown RBP12.76□□□□□ -0.37
PTPN2-210ENST00000591115 GLI3P10071 1580 aa12.76□□□□□ -0.37
PTPN2-210ENST00000591115 KIF16BQ96L93 1317 aa12.76□□□□□ -0.37
PTPN2-210ENST00000591115 TCERG1O14776 1098 aaKnown RBP12.76□□□□□ -0.37
PTPN2-210ENST00000591115 FNBP4Q8N3X1 1017 aaPredicted RBP12.76□□□□□ -0.37
PTPN2-210ENST00000591115 SMC4Q9NTJ3 1288 aa12.76□□□□□ -0.37
PTPN2-210ENST00000591115 USP35Q9P2H5 1018 aa12.76□□□□□ -0.37
PTPN2-210ENST00000591115 LRRC37A3O60309 1634 aa12.76□□□□□ -0.37
PTPN2-210ENST00000591115 IPO8O15397 1037 aaKnown RBP12.75□□□□□ -0.37
PTPN2-210ENST00000591115 UNC5CLQ8IV45 518 aa12.75□□□□□ -0.37
PTPN2-210ENST00000591115 SSH1Q8WYL5 1049 aa12.75□□□□□ -0.37
PTPN2-210ENST00000591115 HTATSF1O43719 755 aaKnown RBP12.74□□□□□ -0.37
PTPN2-210ENST00000591115 GAS2L2Q8NHY3 880 aa12.74□□□□□ -0.37
PTPN2-210ENST00000591115 PANK1Q8TE04 598 aa12.74□□□□□ -0.37
PTPN2-210ENST00000591115 CLUAP1Q96AJ1 413 aa12.74□□□□□ -0.37
PTPN2-210ENST00000591115 USP21Q9UK80 565 aa12.74□□□□□ -0.37
PTPN2-210ENST00000591115 THUMPD2Q9BTF0 503 aaKnown RBP12.73□□□□□ -0.37
PTPN2-210ENST00000591115 BCL2L13Q9BXK5 485 aa12.73□□□□□ -0.37
PTPN2-210ENST00000591115 MBIPQ9NS73 344 aa12.73□□□□□ -0.37
PTPN2-210ENST00000591115 COG6Q9Y2V7 657 aa12.73□□□□□ -0.37
PTPN2-210ENST00000591115 DISP2A7MBM2 1401 aa12.73□□□□□ -0.37
PTPN2-210ENST00000591115 ATRNO75882 1429 aa12.73□□□□□ -0.37
PTPN2-210ENST00000591115 THSD7AQ9UPZ6 1657 aa12.73□□□□□ -0.37
PTPN2-210ENST00000591115 ATF7IPQ6VMQ6 1270 aa12.73□□□□□ -0.37
PTPN2-210ENST00000591115 DZIP1LQ8IYY4 767 aaKnown RBP12.73□□□□□ -0.37
PTPN2-210ENST00000591115 CARD10Q9BWT7 1032 aa12.73□□□□□ -0.37
PTPN2-210ENST00000591115 LAS1LQ9Y4W2 734 aaKnown RBP12.73□□□□□ -0.37
PTPN2-210ENST00000591115 SPATA31A1Q5TZJ5 1347 aa12.72□□□□□ -0.37
PTPN2-210ENST00000591115 SPATA31A5Q5VU36 1347 aa12.72□□□□□ -0.37
PTPN2-210ENST00000591115 SPATA31A7Q8IWB4 1347 aa12.72□□□□□ -0.37
PTPN2-210ENST00000591115 OVOS2A0A0G2JMS6 1433 aa12.72□□□□□ -0.37
PTPN2-210ENST00000591115 CHL1O00533 1208 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms