RNA–Protein interactions for RNA: ENST00000590671.5

NCLN-205, Transcript of nicalin, humanhuman

TSL 2 BASIC

Gene NCLN, Length 2,070 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-205ENST00000590671 MIS18AQ9NYP9 233 aa25.83■■□□□ 1.73
NCLN-205ENST00000590671 BRINP3Q76B58 766 aa25.83■■□□□ 1.72
NCLN-205ENST00000590671 NPHP3Q7Z494 1330 aa25.81■■□□□ 1.72
NCLN-205ENST00000590671 PXDNQ92626 1479 aa25.81■■□□□ 1.72
NCLN-205ENST00000590671 CHL1O00533 1208 aa25.81■■□□□ 1.72
NCLN-205ENST00000590671 GAS2L2Q8NHY3 880 aa25.81■■□□□ 1.72
NCLN-205ENST00000590671 RBM19Q9Y4C8 960 aaKnown RBP25.81■■□□□ 1.72
NCLN-205ENST00000590671 TWISTNBQ3B726 338 aaPredicted RBP25.8■■□□□ 1.72
NCLN-205ENST00000590671 ALDH1L2Q3SY69 923 aa25.79■■□□□ 1.72
NCLN-205ENST00000590671 DZIP1LQ8IYY4 767 aaKnown RBP25.79■■□□□ 1.72
NCLN-205ENST00000590671 ATF7IPQ6VMQ6 1270 aa25.78■■□□□ 1.72
NCLN-205ENST00000590671 RTF1Q92541 710 aaKnown RBP25.78■■□□□ 1.72
NCLN-205ENST00000590671 ANKRD24Q8TF21 1146 aa25.78■■□□□ 1.72
NCLN-205ENST00000590671 FTSJ3Q8IY81 847 aaKnown RBP25.77■■□□□ 1.72
NCLN-205ENST00000590671 IGHDP01880 384 aa25.76■■□□□ 1.71
NCLN-205ENST00000590671 SLAIN2Q9P270 581 aa25.76■■□□□ 1.71
NCLN-205ENST00000590671 TNS3Q68CZ2 1445 aa25.76■■□□□ 1.71
NCLN-205ENST00000590671 MRPL50Q8N5N7 158 aaKnown RBP25.76■■□□□ 1.71
NCLN-205ENST00000590671 RGPD5Q99666 1765 aa25.75■■□□□ 1.71
NCLN-205ENST00000590671 GNAT3A8MTJ3 354 aa25.75■■□□□ 1.71
NCLN-205ENST00000590671 MVPQ14764 893 aaKnown RBP25.75■■□□□ 1.71
NCLN-205ENST00000590671 SPATA31A3Q5VYP0 1347 aa25.75■■□□□ 1.71
NCLN-205ENST00000590671 IL17REQ8NFR9 667 aa25.74■■□□□ 1.71
NCLN-205ENST00000590671 CENPQQ7L2Z9 268 aaPredicted RBP25.73■■□□□ 1.71
NCLN-205ENST00000590671 KIF16BQ96L93 1317 aa25.73■■□□□ 1.71
NCLN-205ENST00000590671 ZNF428Q96B54 188 aa25.73■■□□□ 1.71
NCLN-205ENST00000590671 PCDHB15Q9Y5E8 787 aa25.73■■□□□ 1.71
NCLN-205ENST00000590671 MAP3K5Q99683 1374 aa25.72■■□□□ 1.71
NCLN-205ENST00000590671 BRPF1P55201 1214 aaPredicted RBP25.72■■□□□ 1.71
NCLN-205ENST00000590671 TMEM57Q8N5G2 664 aa25.72■■□□□ 1.71
NCLN-205ENST00000590671 TSPYL4Q9UJ04 414 aa25.7■■□□□ 1.71
NCLN-205ENST00000590671 CHRNA2Q15822 529 aa25.7■■□□□ 1.7
NCLN-205ENST00000590671 ITPRIPQ8IWB1 547 aa25.7■■□□□ 1.7
NCLN-205ENST00000590671 LRRC37A3O60309 1634 aa25.69■■□□□ 1.7
NCLN-205ENST00000590671 ERBB3P21860 1342 aa25.69■■□□□ 1.7
NCLN-205ENST00000590671 HTATSF1O43719 755 aaKnown RBP25.69■■□□□ 1.7
NCLN-205ENST00000590671 IPO8O15397 1037 aaKnown RBP25.68■■□□□ 1.7
NCLN-205ENST00000590671 NCAPD2Q15021 1401 aa25.68■■□□□ 1.7
NCLN-205ENST00000590671 CRYBG1Q9Y4K1 1723 aa25.67■■□□□ 1.7
NCLN-205ENST00000590671 MS4A1P11836 297 aa25.66■■□□□ 1.7
NCLN-205ENST00000590671 LGR6Q9HBX8 967 aa25.66■■□□□ 1.7
NCLN-205ENST00000590671 KIAA0232Q92628 1395 aa25.66■■□□□ 1.7
NCLN-205ENST00000590671 COL18A1P39060 1754 aa25.65■■□□□ 1.7
NCLN-205ENST00000590671 SOS2Q07890 1332 aaPredicted RBP25.65■■□□□ 1.7
NCLN-205ENST00000590671 CAMTA1Q9Y6Y1 1673 aa25.64■■□□□ 1.7
NCLN-205ENST00000590671 ZNF530Q6P9A1 599 aaPredicted RBP25.62■■□□□ 1.69
NCLN-205ENST00000590671 DDX19BQ9UMR2 479 aa25.62■■□□□ 1.69
NCLN-205ENST00000590671 ARHGAP45Q92619 1136 aa25.61■■□□□ 1.69
NCLN-205ENST00000590671 NLRP2Q9NX02 1062 aa25.61■■□□□ 1.69
NCLN-205ENST00000590671 CEMIPQ8WUJ3 1361 aa25.61■■□□□ 1.69
NCLN-205ENST00000590671 PLEKHO1Q53GL0 409 aaPredicted RBP25.6■■□□□ 1.69
NCLN-205ENST00000590671 MPRIPQ6WCQ1 1025 aa25.6■■□□□ 1.69
NCLN-205ENST00000590671 LMO7Q8WWI1 1683 aa25.6■■□□□ 1.69
NCLN-205ENST00000590671 AAMPQ13685 434 aa25.6■■□□□ 1.69
NCLN-205ENST00000590671 TAF7Q15545 349 aaPredicted RBP25.6■■□□□ 1.69
NCLN-205ENST00000590671 ZBTB40Q9NUA8 1239 aa25.58■■□□□ 1.69
NCLN-205ENST00000590671 AKAP4Q5JQC9 854 aa25.57■■□□□ 1.68
NCLN-205ENST00000590671 ABCC4O15439 1325 aa25.57■■□□□ 1.68
NCLN-205ENST00000590671 CSB-PGBD3P0DP91 1061 aa25.56■■□□□ 1.68
NCLN-205ENST00000590671 RGS3P49796 1198 aa25.56■■□□□ 1.68
NCLN-205ENST00000590671 AMOTQ4VCS5 1084 aa25.56■■□□□ 1.68
NCLN-205ENST00000590671 CPDO75976 1380 aa25.56■■□□□ 1.68
NCLN-205ENST00000590671 FAM208AQ9UK61 1670 aaKnown RBP25.55■■□□□ 1.68
NCLN-205ENST00000590671 SLC4A2P04920 1241 aa25.55■■□□□ 1.68
NCLN-205ENST00000590671 RGS12O14924 1447 aa25.55■■□□□ 1.68
NCLN-205ENST00000590671 NECTIN2Q92692 538 aa25.54■■□□□ 1.68
NCLN-205ENST00000590671 KCNQ3O43525 872 aa25.54■■□□□ 1.68
NCLN-205ENST00000590671 G2E3Q7L622 706 aa25.54■■□□□ 1.68
NCLN-205ENST00000590671 ZBTB7BO15156 539 aaPredicted RBP25.53■■□□□ 1.68
NCLN-205ENST00000590671 MEGF6O75095 1541 aa25.53■■□□□ 1.68
NCLN-205ENST00000590671 API5Q9BZZ5 524 aaKnown RBP25.52■■□□□ 1.68
NCLN-205ENST00000590671 RNMTO43148 476 aaKnown RBP25.52■■□□□ 1.68
NCLN-205ENST00000590671 C1orf141Q5JVX7 400 aa25.52■■□□□ 1.68
NCLN-205ENST00000590671 HAP1P54257 671 aaPredicted RBP25.51■■□□□ 1.67
NCLN-205ENST00000590671 C1orf115Q9H7X2 142 aa25.51■■□□□ 1.67
NCLN-205ENST00000590671 PRDM11Q9NQV5 511 aa25.51■■□□□ 1.67
NCLN-205ENST00000590671 NHSL1Q5SYE7 1610 aa25.51■■□□□ 1.67
NCLN-205ENST00000590671 PDE4AP27815 886 aa25.51■■□□□ 1.67
NCLN-205ENST00000590671 RWDD1Q9H446 243 aaPredicted RBP25.51■■□□□ 1.67
NCLN-205ENST00000590671 RAPGEF4Q8WZA2 1011 aa25.5■■□□□ 1.67
NCLN-205ENST00000590671 BABAM1Q9NWV8 329 aa25.49■■□□□ 1.67
NCLN-205ENST00000590671 TEFQ10587 303 aa25.48■■□□□ 1.67
NCLN-205ENST00000590671 ABCA3Q99758 1704 aa25.48■■□□□ 1.67
NCLN-205ENST00000590671 VIRMAQ69YN4 1812 aaKnown RBP25.48■■□□□ 1.67
NCLN-205ENST00000590671 ABCC6O95255 1503 aa25.47■■□□□ 1.67
NCLN-205ENST00000590671 BTBD11A6QL63 1104 aa25.46■■□□□ 1.67
NCLN-205ENST00000590671 EIF4A1P60842 406 aaKnown RBP25.46■■□□□ 1.67
NCLN-205ENST00000590671 BACH2Q9BYV9 841 aa25.46■■□□□ 1.67
NCLN-205ENST00000590671 TATP17735 454 aaPredicted RBP25.46■■□□□ 1.67
NCLN-205ENST00000590671 HDAC1Q13547 482 aaPredicted RBP25.46■■□□□ 1.67
NCLN-205ENST00000590671 PDZRN3Q9UPQ7 1066 aa25.46■■□□□ 1.67
NCLN-205ENST00000590671 KDM3BQ7LBC6 1761 aa25.45■■□□□ 1.67
NCLN-205ENST00000590671 F6X3S4 739 aa25.45■■□□□ 1.66
NCLN-205ENST00000590671 PTPRCP08575 1304 aa25.44■■□□□ 1.66
NCLN-205ENST00000590671 INTS3Q68E01 1043 aaKnown RBP25.44■■□□□ 1.66
NCLN-205ENST00000590671 LTBP4Q8N2S1 1624 aa25.43■■□□□ 1.66
NCLN-205ENST00000590671 CCDC30Q5VVM6 783 aa25.43■■□□□ 1.66
NCLN-205ENST00000590671 PHKG2P15735 406 aa25.42■■□□□ 1.66
NCLN-205ENST00000590671 STK31Q9BXU1 1019 aa25.42■■□□□ 1.66
NCLN-205ENST00000590671 KDM6AO15550 1401 aaPredicted RBP25.42■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms