RNA–Protein interactions for RNA: ENST00000590635.5

CTDP1-206, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 5

Gene CTDP1, Length 489 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-206ENST00000590635 PCDH11XQ9BZA7 1347 aa16.51■□□□□ 0.23
CTDP1-206ENST00000590635 PCDH11YQ9BZA8 1340 aa16.51■□□□□ 0.23
CTDP1-206ENST00000590635 PLEKHG2Q9H7P9 1386 aa16.51■□□□□ 0.23
CTDP1-206ENST00000590635 MEGF6O75095 1541 aa16.5■□□□□ 0.23
CTDP1-206ENST00000590635 KCNQ2O43526 872 aa16.5■□□□□ 0.23
CTDP1-206ENST00000590635 CC2D1BQ5T0F9 858 aaKnown RBP16.5■□□□□ 0.23
CTDP1-206ENST00000590635 ACSBG1Q96GR2 724 aa16.5■□□□□ 0.23
CTDP1-206ENST00000590635 HMGB2P26583 209 aaKnown RBP16.49■□□□□ 0.23
CTDP1-206ENST00000590635 NCAPD2Q15021 1401 aa16.49■□□□□ 0.23
CTDP1-206ENST00000590635 SBF2Q86WG5 1849 aa16.48■□□□□ 0.23
CTDP1-206ENST00000590635 PTF1AQ7RTS3 328 aa16.48■□□□□ 0.23
CTDP1-206ENST00000590635 MTHFSP49914 203 aa16.47■□□□□ 0.23
CTDP1-206ENST00000590635 R3HDM1Q15032 1099 aaKnown RBP16.47■□□□□ 0.23
CTDP1-206ENST00000590635 TXNRD1Q16881 649 aa16.47■□□□□ 0.23
CTDP1-206ENST00000590635 SYTL4Q96C24 671 aaPredicted RBP16.47■□□□□ 0.23
CTDP1-206ENST00000590635 IGSF1Q8N6C5 1336 aa16.46■□□□□ 0.23
CTDP1-206ENST00000590635 ZEB1P37275 1124 aaPredicted RBP16.46■□□□□ 0.23
CTDP1-206ENST00000590635 PRIM1P49642 420 aaKnown RBP16.46■□□□□ 0.23
CTDP1-206ENST00000590635 RGPD2P0DJD1 1756 aa16.46■□□□□ 0.22
CTDP1-206ENST00000590635 PSDA5PKW4 1024 aaPredicted RBP16.45■□□□□ 0.22
CTDP1-206ENST00000590635 AMOTQ4VCS5 1084 aa16.45■□□□□ 0.22
CTDP1-206ENST00000590635 PROM2Q8N271 834 aa16.45■□□□□ 0.22
CTDP1-206ENST00000590635 RGPD3A6NKT7 1758 aaPredicted RBP16.44■□□□□ 0.22
CTDP1-206ENST00000590635 RGPD4Q7Z3J3 1758 aa16.44■□□□□ 0.22
CTDP1-206ENST00000590635 CYP27B1O15528 508 aa16.44■□□□□ 0.22
CTDP1-206ENST00000590635 IL13P35225 146 aa16.44■□□□□ 0.22
CTDP1-206ENST00000590635 NKX1-1Q15270 411 aaPredicted RBP16.44■□□□□ 0.22
CTDP1-206ENST00000590635 PLEKHO1Q53GL0 409 aaPredicted RBP16.44■□□□□ 0.22
CTDP1-206ENST00000590635 SLC27A3Q5K4L6 730 aa16.44■□□□□ 0.22
CTDP1-206ENST00000590635 IFNL2Q8IZJ0 200 aa16.44■□□□□ 0.22
CTDP1-206ENST00000590635 NHSQ6T4R5 1651 aa16.43■□□□□ 0.22
CTDP1-206ENST00000590635 DIAPH1O60610 1272 aaKnown RBP16.42■□□□□ 0.22
CTDP1-206ENST00000590635 HSP90AB1P08238 724 aaKnown RBP16.42■□□□□ 0.22
CTDP1-206ENST00000590635 SULT6B1Q6IMI4 303 aa16.41■□□□□ 0.22
CTDP1-206ENST00000590635 STK32BQ9NY57 414 aa16.41■□□□□ 0.22
CTDP1-206ENST00000590635 KAT6BQ8WYB5 2073 aa16.41■□□□□ 0.22
CTDP1-206ENST00000590635 RREB1Q92766 1687 aa16.4■□□□□ 0.22
CTDP1-206ENST00000590635 PHKG2P15735 406 aa16.4■□□□□ 0.22
CTDP1-206ENST00000590635 CFAP53Q96M91 514 aa16.4■□□□□ 0.22
CTDP1-206ENST00000590635 CNGB1Q14028 1251 aaPredicted RBP16.39■□□□□ 0.21
CTDP1-206ENST00000590635 SLC15A2Q16348 729 aa16.39■□□□□ 0.21
CTDP1-206ENST00000590635 MPRIPQ6WCQ1 1025 aa16.39■□□□□ 0.21
CTDP1-206ENST00000590635 SMARCC1Q92922 1105 aaPredicted RBP16.39■□□□□ 0.21
CTDP1-206ENST00000590635 KDRP35968 1356 aa16.38■□□□□ 0.21
CTDP1-206ENST00000590635 C1orf141Q5JVX7 400 aa16.37■□□□□ 0.21
CTDP1-206ENST00000590635 DCAF5Q96JK2 942 aa16.37■□□□□ 0.21
CTDP1-206ENST00000590635 SRCAPQ6ZRS2 3230 aa16.37■□□□□ 0.21
CTDP1-206ENST00000590635 NUP188Q5SRE5 1749 aa16.36■□□□□ 0.21
CTDP1-206ENST00000590635 ERVV-2B6SEH9 535 aa16.36■□□□□ 0.21
CTDP1-206ENST00000590635 AEBP1Q8IUX7 1158 aa16.36■□□□□ 0.21
CTDP1-206ENST00000590635 TMOD3Q9NYL9 352 aa16.36■□□□□ 0.21
CTDP1-206ENST00000590635 NUDCQ9Y266 331 aa16.36■□□□□ 0.21
CTDP1-206ENST00000590635 PKD1L3Q7Z443 1732 aa16.36■□□□□ 0.21
CTDP1-206ENST00000590635 SHANK3Q9BYB0 1731 aa16.36■□□□□ 0.21
CTDP1-206ENST00000590635 BTAF1O14981 1849 aa16.35■□□□□ 0.21
CTDP1-206ENST00000590635 ZNF530Q6P9A1 599 aaPredicted RBP16.35■□□□□ 0.21
CTDP1-206ENST00000590635 ANO8Q9HCE9 1232 aaPredicted RBP16.35■□□□□ 0.21
CTDP1-206ENST00000590635 CCNL1Q9UK58 526 aaPredicted RBP16.35■□□□□ 0.21
CTDP1-206ENST00000590635 SPON1Q9HCB6 807 aa16.34■□□□□ 0.21
CTDP1-206ENST00000590635 LRRC4BQ9NT99 713 aa16.34■□□□□ 0.21
CTDP1-206ENST00000590635 PPP2R1AP30153 589 aa16.33■□□□□ 0.2
CTDP1-206ENST00000590635 PIGBQ92521 554 aa16.33■□□□□ 0.2
CTDP1-206ENST00000590635 U2SURPO15042 1029 aaKnown RBP16.32■□□□□ 0.2
CTDP1-206ENST00000590635 HMOX1P09601 288 aa16.32■□□□□ 0.2
CTDP1-206ENST00000590635 AKAP4Q5JQC9 854 aa16.32■□□□□ 0.2
CTDP1-206ENST00000590635 DOT1LQ8TEK3 1739 aa16.32■□□□□ 0.2
CTDP1-206ENST00000590635 PALLDQ8WX93 1383 aa16.31■□□□□ 0.2
CTDP1-206ENST00000590635 CABP4P57796 275 aa16.31■□□□□ 0.2
CTDP1-206ENST00000590635 AKT1S1Q96B36 256 aa16.3■□□□□ 0.2
CTDP1-206ENST00000590635 TFCP2L1Q9NZI6 479 aa16.3■□□□□ 0.2
CTDP1-206ENST00000590635 DDX10Q13206 875 aaKnown RBP16.29■□□□□ 0.2
CTDP1-206ENST00000590635 RALBP1Q15311 655 aa16.29■□□□□ 0.2
CTDP1-206ENST00000590635 SLC16A10Q8TF71 515 aa16.29■□□□□ 0.2
CTDP1-206ENST00000590635 LRP5O75197 1615 aa16.29■□□□□ 0.2
CTDP1-206ENST00000590635 MTFR1LQ9H019 292 aa16.28■□□□□ 0.2
CTDP1-206ENST00000590635 LOC102724428A0A0B4J2F2 783 aa16.27■□□□□ 0.2
CTDP1-206ENST00000590635 SIK1P57059 783 aa16.27■□□□□ 0.2
CTDP1-206ENST00000590635 ZNF827Q17R98 1081 aa16.27■□□□□ 0.2
CTDP1-206ENST00000590635 FLAD1Q8NFF5 587 aa16.27■□□□□ 0.2
CTDP1-206ENST00000590635 GAS2L2Q8NHY3 880 aa16.27■□□□□ 0.2
CTDP1-206ENST00000590635 PPP1R1BQ9UD71 204 aaPredicted RBP16.27■□□□□ 0.2
CTDP1-206ENST00000590635 FCHSD2O94868 740 aa16.26■□□□□ 0.19
CTDP1-206ENST00000590635 KCNQ4P56696 695 aa16.26■□□□□ 0.19
CTDP1-206ENST00000590635 MTHFSDQ2M296 383 aaKnown RBP16.26■□□□□ 0.19
CTDP1-206ENST00000590635 ATG3Q9NT62 314 aa16.26■□□□□ 0.19
CTDP1-206ENST00000590635 ASAP1Q9ULH1 1129 aa16.26■□□□□ 0.19
CTDP1-206ENST00000590635 COL3A1P02461 1466 aaPredicted RBP16.26■□□□□ 0.19
CTDP1-206ENST00000590635 LY75O60449 1722 aa16.25■□□□□ 0.19
CTDP1-206ENST00000590635 U2AF1L5P0DN76 240 aaPredicted RBP16.25■□□□□ 0.19
CTDP1-206ENST00000590635 U2AF1Q01081 240 aaKnown RBP eCLIP16.25■□□□□ 0.19
CTDP1-206ENST00000590635 NFATC2IPQ8NCF5 419 aa16.25■□□□□ 0.19
CTDP1-206ENST00000590635 PAPPAQ13219 1627 aa16.24■□□□□ 0.19
CTDP1-206ENST00000590635 ZBTB7AO95365 584 aa16.24■□□□□ 0.19
CTDP1-206ENST00000590635 NEFMP07197 916 aa16.24■□□□□ 0.19
CTDP1-206ENST00000590635 ATP6V1AP38606 617 aa16.24■□□□□ 0.19
CTDP1-206ENST00000590635 PNNQ9H307 717 aaKnown RBP16.24■□□□□ 0.19
CTDP1-206ENST00000590635 KDM6AO15550 1401 aaPredicted RBP16.23■□□□□ 0.19
CTDP1-206ENST00000590635 AK7Q96M32 723 aa16.23■□□□□ 0.19
CTDP1-206ENST00000590635 PDGFDQ9GZP0 370 aaPredicted RBP16.23■□□□□ 0.19
CTDP1-206ENST00000590635 ITGB4P16144 1822 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms