RNA–Protein interactions for RNA: ENST00000590563.1

LSM12-203, Transcript of LSM12 homolog, humanhuman

TSL 2

Gene LSM12, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM12-203ENST00000590563 KLRG1Q96E93 195 aa19.46■□□□□ 0.71
LSM12-203ENST00000590563 WWC3Q9ULE0 1092 aa19.46■□□□□ 0.71
LSM12-203ENST00000590563 TTC21AQ8NDW8 1320 aa19.46■□□□□ 0.71
LSM12-203ENST00000590563 HTRA3P83110 453 aa19.45■□□□□ 0.7
LSM12-203ENST00000590563 CCNL1Q9UK58 526 aaPredicted RBP19.45■□□□□ 0.7
LSM12-203ENST00000590563 PRIM1P49642 420 aaKnown RBP19.44■□□□□ 0.7
LSM12-203ENST00000590563 LTN1O94822 1766 aa19.43■□□□□ 0.7
LSM12-203ENST00000590563 C5P01031 1676 aa19.43■□□□□ 0.7
LSM12-203ENST00000590563 SLC34A2O95436 690 aa19.42■□□□□ 0.7
LSM12-203ENST00000590563 DDX54Q8TDD1 881 aaKnown RBP19.42■□□□□ 0.7
LSM12-203ENST00000590563 ANKRD24Q8TF21 1146 aa19.42■□□□□ 0.7
LSM12-203ENST00000590563 TOGARAM1Q9Y4F4 1720 aa19.42■□□□□ 0.7
LSM12-203ENST00000590563 SYTL4Q96C24 671 aaPredicted RBP19.41■□□□□ 0.7
LSM12-203ENST00000590563 NMRK2Q9NPI5 230 aa19.4■□□□□ 0.7
LSM12-203ENST00000590563 USP31Q70CQ4 1352 aa19.4■□□□□ 0.7
LSM12-203ENST00000590563 ZNF692Q9BU19 519 aaPredicted RBP19.39■□□□□ 0.69
LSM12-203ENST00000590563 RAB3GAP2Q9H2M9 1393 aa19.39■□□□□ 0.69
LSM12-203ENST00000590563 MON2Q7Z3U7 1717 aa19.39■□□□□ 0.69
LSM12-203ENST00000590563 KAT6BQ8WYB5 2073 aa19.39■□□□□ 0.69
LSM12-203ENST00000590563 FAM208AQ9UK61 1670 aaKnown RBP19.37■□□□□ 0.69
LSM12-203ENST00000590563 AMIGO3Q86WK7 504 aa19.37■□□□□ 0.69
LSM12-203ENST00000590563 KIAA1551Q9HCM1 1747 aa19.37■□□□□ 0.69
LSM12-203ENST00000590563 RBM46Q8TBY0 533 aaKnown RBP19.36■□□□□ 0.69
LSM12-203ENST00000590563 TAF1LQ8IZX4 1826 aa19.35■□□□□ 0.69
LSM12-203ENST00000590563 KTN1Q86UP2 1357 aaKnown RBP19.34■□□□□ 0.69
LSM12-203ENST00000590563 USP47Q96K76 1375 aa19.34■□□□□ 0.69
LSM12-203ENST00000590563 EVC2Q86UK5 1308 aa19.33■□□□□ 0.69
LSM12-203ENST00000590563 MEGF6O75095 1541 aa19.33■□□□□ 0.68
LSM12-203ENST00000590563 C4BP0C0L5 1744 aa19.33■□□□□ 0.68
LSM12-203ENST00000590563 PXDNLA1KZ92 1463 aa19.33■□□□□ 0.68
LSM12-203ENST00000590563 FLAD1Q8NFF5 587 aa19.32■□□□□ 0.68
LSM12-203ENST00000590563 NME9Q86XW9 330 aa19.31■□□□□ 0.68
LSM12-203ENST00000590563 CD163L1Q9NR16 1453 aa19.3■□□□□ 0.68
LSM12-203ENST00000590563 SMIM5Q71RC9 77 aa19.3■□□□□ 0.68
LSM12-203ENST00000590563 SBNO2Q9Y2G9 1366 aa19.3■□□□□ 0.68
LSM12-203ENST00000590563 UBR3Q6ZT12 1888 aa19.29■□□□□ 0.68
LSM12-203ENST00000590563 FSTL1Q12841 308 aa19.29■□□□□ 0.68
LSM12-203ENST00000590563 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.29■□□□□ 0.68
LSM12-203ENST00000590563 KIF13BQ9NQT8 1826 aa19.28■□□□□ 0.68
LSM12-203ENST00000590563 PCNTO95613 3336 aa19.27■□□□□ 0.68
LSM12-203ENST00000590563 PALLDQ8WX93 1383 aa19.27■□□□□ 0.68
LSM12-203ENST00000590563 C10orf71Q711Q0 1435 aa19.26■□□□□ 0.67
LSM12-203ENST00000590563 HSPA1AP0DMV8 641 aaKnown RBP19.26■□□□□ 0.67
LSM12-203ENST00000590563 HSPA1BP0DMV9 641 aaKnown RBP19.26■□□□□ 0.67
LSM12-203ENST00000590563 ZCRB1Q8TBF4 217 aaKnown RBP19.26■□□□□ 0.67
LSM12-203ENST00000590563 IP6K1Q92551 441 aa19.25■□□□□ 0.67
LSM12-203ENST00000590563 PKD1L3Q7Z443 1732 aa19.25■□□□□ 0.67
LSM12-203ENST00000590563 KCPQ6ZWJ8 1503 aa19.25■□□□□ 0.67
LSM12-203ENST00000590563 N4BP2Q86UW6 1770 aaPredicted RBP19.24■□□□□ 0.67
LSM12-203ENST00000590563 PHF14O94880 888 aa19.24■□□□□ 0.67
LSM12-203ENST00000590563 LTV1Q96GA3 475 aaPredicted RBP19.24■□□□□ 0.67
LSM12-203ENST00000590563 RGPD2P0DJD1 1756 aa19.24■□□□□ 0.67
LSM12-203ENST00000590563 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.23■□□□□ 0.67
LSM12-203ENST00000590563 PLEKHG2Q9H7P9 1386 aa19.22■□□□□ 0.67
LSM12-203ENST00000590563 C16orf71Q8IYS4 520 aaPredicted RBP19.22■□□□□ 0.67
LSM12-203ENST00000590563 AK7Q96M32 723 aa19.22■□□□□ 0.67
LSM12-203ENST00000590563 BCS1LQ9Y276 419 aa19.22■□□□□ 0.67
LSM12-203ENST00000590563 NSD3Q9BZ95 1437 aa19.21■□□□□ 0.67
LSM12-203ENST00000590563 BRCA1P38398 1863 aaKnown RBP19.2■□□□□ 0.66
LSM12-203ENST00000590563 TNRC6CQ9HCJ0 1690 aaKnown RBP19.2■□□□□ 0.66
LSM12-203ENST00000590563 SSFA2P28290 1259 aa19.19■□□□□ 0.66
LSM12-203ENST00000590563 C9orf131Q5VYM1 1079 aa19.19■□□□□ 0.66
LSM12-203ENST00000590563 ARHGAP27Q6ZUM4 889 aa19.19■□□□□ 0.66
LSM12-203ENST00000590563 MAP2P11137 1827 aaKnown RBP19.18■□□□□ 0.66
LSM12-203ENST00000590563 EDC4Q6P2E9 1401 aaKnown RBP19.17■□□□□ 0.66
LSM12-203ENST00000590563 A0A0G2JLW4 131 aa19.17■□□□□ 0.66
LSM12-203ENST00000590563 TGFB2P61812 414 aa19.17■□□□□ 0.66
LSM12-203ENST00000590563 MMP10P09238 476 aa19.16■□□□□ 0.66
LSM12-203ENST00000590563 HMGB2P26583 209 aaKnown RBP19.15■□□□□ 0.66
LSM12-203ENST00000590563 HOXC9P31274 260 aa19.15■□□□□ 0.66
LSM12-203ENST00000590563 LINC00116Q8NCU8 138 aa19.15■□□□□ 0.66
LSM12-203ENST00000590563 SMC1BQ8NDV3 1235 aa19.15■□□□□ 0.66
LSM12-203ENST00000590563 RRAGCQ9HB90 399 aa19.15■□□□□ 0.66
LSM12-203ENST00000590563 MAP3K19Q56UN5 1328 aa19.15■□□□□ 0.66
LSM12-203ENST00000590563 ARFGEF1Q9Y6D6 1849 aa19.14■□□□□ 0.65
LSM12-203ENST00000590563 DPEP1P16444 411 aa19.13■□□□□ 0.65
LSM12-203ENST00000590563 MPRIPQ6WCQ1 1025 aa19.13■□□□□ 0.65
LSM12-203ENST00000590563 KDM2BQ8NHM5 1336 aa19.13■□□□□ 0.65
LSM12-203ENST00000590563 ITGB4P16144 1822 aa19.12■□□□□ 0.65
LSM12-203ENST00000590563 CGNL1Q0VF96 1302 aa19.12■□□□□ 0.65
LSM12-203ENST00000590563 FCHSD2O94868 740 aa19.12■□□□□ 0.65
LSM12-203ENST00000590563 NBPF6Q5VWK0 638 aa19.12■□□□□ 0.65
LSM12-203ENST00000590563 NBPF4Q96M43 638 aa19.12■□□□□ 0.65
LSM12-203ENST00000590563 A0A1W2PP64 1363 aa19.11■□□□□ 0.65
LSM12-203ENST00000590563 KCNA3P22001 575 aa19.11■□□□□ 0.65
LSM12-203ENST00000590563 USHBP1Q8N6Y0 703 aa19.11■□□□□ 0.65
LSM12-203ENST00000590563 C4AP0C0L4 1744 aa19.11■□□□□ 0.65
LSM12-203ENST00000590563 PCDH11XQ9BZA7 1347 aa19.1■□□□□ 0.65
LSM12-203ENST00000590563 PCDH11YQ9BZA8 1340 aa19.1■□□□□ 0.65
LSM12-203ENST00000590563 FBLN1P23142 703 aa19.1■□□□□ 0.65
LSM12-203ENST00000590563 SMARCC1Q92922 1105 aaPredicted RBP19.1■□□□□ 0.65
LSM12-203ENST00000590563 GNPATO15228 680 aa19.09■□□□□ 0.65
LSM12-203ENST00000590563 ITPK1Q13572 414 aa19.09■□□□□ 0.65
LSM12-203ENST00000590563 RNF181Q9P0P0 153 aa19.09■□□□□ 0.65
LSM12-203ENST00000590563 CYP27B1O15528 508 aa19.08■□□□□ 0.64
LSM12-203ENST00000590563 PIGBQ92521 554 aa19.08■□□□□ 0.64
LSM12-203ENST00000590563 DCAF5Q96JK2 942 aa19.08■□□□□ 0.64
LSM12-203ENST00000590563 PCDH10Q9P2E7 1040 aa19.08■□□□□ 0.64
LSM12-203ENST00000590563 RTL1A6NKG5 1358 aa19.07■□□□□ 0.64
LSM12-203ENST00000590563 LOC102724428A0A0B4J2F2 783 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms