RNA–Protein interactions for RNA: ENST00000590445.5

GCDH-210, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 4

Gene GCDH, Length 496 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-210ENST00000590445 PTF1AQ7RTS3 328 aa21.88■■□□□ 1.09
GCDH-210ENST00000590445 NPC1L1Q9UHC9 1359 aa21.87■■□□□ 1.09
GCDH-210ENST00000590445 TATP17735 454 aaPredicted RBP21.87■■□□□ 1.09
GCDH-210ENST00000590445 NHSQ6T4R5 1651 aa21.87■■□□□ 1.09
GCDH-210ENST00000590445 PSDA5PKW4 1024 aaPredicted RBP21.86■■□□□ 1.09
GCDH-210ENST00000590445 KCNQ2O43526 872 aa21.86■■□□□ 1.09
GCDH-210ENST00000590445 NBPF14Q5TI25 921 aa21.86■■□□□ 1.09
GCDH-210ENST00000590445 ACSBG1Q96GR2 724 aa21.86■■□□□ 1.09
GCDH-210ENST00000590445 NUP188Q5SRE5 1749 aa21.85■■□□□ 1.09
GCDH-210ENST00000590445 NCAPD2Q15021 1401 aa21.84■■□□□ 1.09
GCDH-210ENST00000590445 R3HDM1Q15032 1099 aaKnown RBP21.84■■□□□ 1.09
GCDH-210ENST00000590445 KAT6BQ8WYB5 2073 aa21.84■■□□□ 1.09
GCDH-210ENST00000590445 EYA1Q99502 592 aa21.82■■□□□ 1.08
GCDH-210ENST00000590445 SHANK3Q9BYB0 1731 aa21.82■■□□□ 1.08
GCDH-210ENST00000590445 EIF4A2Q14240 407 aaKnown RBP21.81■■□□□ 1.08
GCDH-210ENST00000590445 PCDH11XQ9BZA7 1347 aa21.8■■□□□ 1.08
GCDH-210ENST00000590445 PCDH11YQ9BZA8 1340 aa21.8■■□□□ 1.08
GCDH-210ENST00000590445 TXNRD1Q16881 649 aa21.79■■□□□ 1.08
GCDH-210ENST00000590445 ZNF316A6NFI3 1004 aaPredicted RBP21.78■■□□□ 1.08
GCDH-210ENST00000590445 CC2D1BQ5T0F9 858 aaKnown RBP21.78■■□□□ 1.08
GCDH-210ENST00000590445 PROM2Q8N271 834 aa21.78■■□□□ 1.08
GCDH-210ENST00000590445 BTAF1O14981 1849 aa21.78■■□□□ 1.08
GCDH-210ENST00000590445 PRIM1P49642 420 aaKnown RBP21.77■■□□□ 1.08
GCDH-210ENST00000590445 SYTL4Q96C24 671 aaPredicted RBP21.76■■□□□ 1.07
GCDH-210ENST00000590445 SPG7Q9UQ90 795 aa21.76■■□□□ 1.07
GCDH-210ENST00000590445 DOT1LQ8TEK3 1739 aa21.75■■□□□ 1.07
GCDH-210ENST00000590445 DDX10Q13206 875 aaKnown RBP21.75■■□□□ 1.07
GCDH-210ENST00000590445 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.75■■□□□ 1.07
GCDH-210ENST00000590445 SRCAPQ6ZRS2 3230 aa21.75■■□□□ 1.07
GCDH-210ENST00000590445 IGSF1Q8N6C5 1336 aa21.75■■□□□ 1.07
GCDH-210ENST00000590445 PKD1L3Q7Z443 1732 aa21.75■■□□□ 1.07
GCDH-210ENST00000590445 PLEKHG2Q9H7P9 1386 aa21.74■■□□□ 1.07
GCDH-210ENST00000590445 LRP5O75197 1615 aa21.74■■□□□ 1.07
GCDH-210ENST00000590445 CYP27B1O15528 508 aa21.73■■□□□ 1.07
GCDH-210ENST00000590445 ANO8Q9HCE9 1232 aaPredicted RBP21.71■■□□□ 1.07
GCDH-210ENST00000590445 STK32BQ9NY57 414 aa21.71■■□□□ 1.07
GCDH-210ENST00000590445 MTHFSP49914 203 aa21.7■■□□□ 1.06
GCDH-210ENST00000590445 NKX1-1Q15270 411 aaPredicted RBP21.69■■□□□ 1.06
GCDH-210ENST00000590445 SLC27A3Q5K4L6 730 aa21.69■■□□□ 1.06
GCDH-210ENST00000590445 IL13P35225 146 aa21.68■■□□□ 1.06
GCDH-210ENST00000590445 CNGB1Q14028 1251 aaPredicted RBP21.68■■□□□ 1.06
GCDH-210ENST00000590445 IFNL2Q8IZJ0 200 aa21.67■■□□□ 1.06
GCDH-210ENST00000590445 SLC15A2Q16348 729 aa21.66■■□□□ 1.06
GCDH-210ENST00000590445 PHKG2P15735 406 aa21.65■■□□□ 1.06
GCDH-210ENST00000590445 PLEKHO1Q53GL0 409 aaPredicted RBP21.65■■□□□ 1.06
GCDH-210ENST00000590445 LRRC4BQ9NT99 713 aa21.65■■□□□ 1.06
GCDH-210ENST00000590445 AMOTQ4VCS5 1084 aa21.64■■□□□ 1.05
GCDH-210ENST00000590445 SULT6B1Q6IMI4 303 aa21.64■■□□□ 1.05
GCDH-210ENST00000590445 AEBP1Q8IUX7 1158 aa21.64■■□□□ 1.05
GCDH-210ENST00000590445 PAPPAQ13219 1627 aa21.64■■□□□ 1.05
GCDH-210ENST00000590445 LY75O60449 1722 aa21.63■■□□□ 1.05
GCDH-210ENST00000590445 KDRP35968 1356 aa21.63■■□□□ 1.05
GCDH-210ENST00000590445 MPRIPQ6WCQ1 1025 aa21.63■■□□□ 1.05
GCDH-210ENST00000590445 DIAPH1O60610 1272 aaKnown RBP21.62■■□□□ 1.05
GCDH-210ENST00000590445 HSP90AB1P08238 724 aaKnown RBP21.62■■□□□ 1.05
GCDH-210ENST00000590445 SPON1Q9HCB6 807 aa21.62■■□□□ 1.05
GCDH-210ENST00000590445 TOGARAM1Q9Y4F4 1720 aa21.62■■□□□ 1.05
GCDH-210ENST00000590445 HMGB2P26583 209 aaKnown RBP21.61■■□□□ 1.05
GCDH-210ENST00000590445 RALBP1Q15311 655 aa21.61■■□□□ 1.05
GCDH-210ENST00000590445 SMARCC1Q92922 1105 aaPredicted RBP21.61■■□□□ 1.05
GCDH-210ENST00000590445 CCNL1Q9UK58 526 aaPredicted RBP21.61■■□□□ 1.05
GCDH-210ENST00000590445 ITGB4P16144 1822 aa21.61■■□□□ 1.05
GCDH-210ENST00000590445 PPP2R1AP30153 589 aa21.6■■□□□ 1.05
GCDH-210ENST00000590445 ZNF530Q6P9A1 599 aaPredicted RBP21.6■■□□□ 1.05
GCDH-210ENST00000590445 CASZ1Q86V15 1759 aa21.6■■□□□ 1.05
GCDH-210ENST00000590445 PIGBQ92521 554 aa21.59■■□□□ 1.05
GCDH-210ENST00000590445 CFAP53Q96M91 514 aa21.59■■□□□ 1.05
GCDH-210ENST00000590445 TMOD3Q9NYL9 352 aa21.59■■□□□ 1.05
GCDH-210ENST00000590445 PALLDQ8WX93 1383 aa21.59■■□□□ 1.05
GCDH-210ENST00000590445 ZNF827Q17R98 1081 aa21.58■■□□□ 1.05
GCDH-210ENST00000590445 AKT1S1Q96B36 256 aa21.58■■□□□ 1.05
GCDH-210ENST00000590445 DCAF5Q96JK2 942 aa21.58■■□□□ 1.05
GCDH-210ENST00000590445 KCNQ4P56696 695 aa21.57■■□□□ 1.04
GCDH-210ENST00000590445 C1orf141Q5JVX7 400 aa21.57■■□□□ 1.04
GCDH-210ENST00000590445 ERVV-2B6SEH9 535 aa21.56■■□□□ 1.04
GCDH-210ENST00000590445 PDGFDQ9GZP0 370 aaPredicted RBP21.56■■□□□ 1.04
GCDH-210ENST00000590445 COL3A1P02461 1466 aaPredicted RBP21.55■■□□□ 1.04
GCDH-210ENST00000590445 ZBTB7AO95365 584 aa21.54■■□□□ 1.04
GCDH-210ENST00000590445 HMOX1P09601 288 aa21.54■■□□□ 1.04
GCDH-210ENST00000590445 TFCP2L1Q9NZI6 479 aa21.54■■□□□ 1.04
GCDH-210ENST00000590445 PPP1R1BQ9UD71 204 aaPredicted RBP21.54■■□□□ 1.04
GCDH-210ENST00000590445 MTFR1LQ9H019 292 aa21.53■■□□□ 1.04
GCDH-210ENST00000590445 QSER1Q2KHR3 1735 aa21.52■■□□□ 1.04
GCDH-210ENST00000590445 U2SURPO15042 1029 aaKnown RBP21.51■■□□□ 1.03
GCDH-210ENST00000590445 KDM6AO15550 1401 aaPredicted RBP21.51■■□□□ 1.03
GCDH-210ENST00000590445 MYBBP1AQ9BQG0 1328 aaKnown RBP21.51■■□□□ 1.03
GCDH-210ENST00000590445 CABP4P57796 275 aa21.5■■□□□ 1.03
GCDH-210ENST00000590445 AKAP4Q5JQC9 854 aa21.5■■□□□ 1.03
GCDH-210ENST00000590445 PRKRIP1Q9H875 184 aaPredicted RBP21.5■■□□□ 1.03
GCDH-210ENST00000590445 ASAP1Q9ULH1 1129 aa21.5■■□□□ 1.03
GCDH-210ENST00000590445 NUDCQ9Y266 331 aa21.5■■□□□ 1.03
GCDH-210ENST00000590445 ATF5Q9Y2D1 282 aaPredicted RBP21.5■■□□□ 1.03
GCDH-210ENST00000590445 LOC102724428A0A0B4J2F2 783 aa21.49■■□□□ 1.03
GCDH-210ENST00000590445 SIK1P57059 783 aa21.49■■□□□ 1.03
GCDH-210ENST00000590445 SLC16A10Q8TF71 515 aa21.49■■□□□ 1.03
GCDH-210ENST00000590445 ATG3Q9NT62 314 aa21.49■■□□□ 1.03
GCDH-210ENST00000590445 C5P01031 1676 aa21.49■■□□□ 1.03
GCDH-210ENST00000590445 PNPLA7Q6ZV29 1317 aa21.49■■□□□ 1.03
GCDH-210ENST00000590445 PTGER2P43116 358 aa21.47■■□□□ 1.03
GCDH-210ENST00000590445 TAF1LQ8IZX4 1826 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms