RNA–Protein interactions for RNA: ENST00000590301.1

NPC1-208, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 410 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-208ENST00000590301 SLC15A2Q16348 729 aa10.5□□□□□ -0.73
NPC1-208ENST00000590301 SLC27A3Q5K4L6 730 aa10.5□□□□□ -0.73
NPC1-208ENST00000590301 DDX54Q8TDD1 881 aaKnown RBP10.5□□□□□ -0.73
NPC1-208ENST00000590301 ACSBG1Q96GR2 724 aa10.5□□□□□ -0.73
NPC1-208ENST00000590301 ANO8Q9HCE9 1232 aaPredicted RBP10.5□□□□□ -0.73
NPC1-208ENST00000590301 TATP17735 454 aaPredicted RBP10.49□□□□□ -0.73
NPC1-208ENST00000590301 FBLN1P23142 703 aa10.49□□□□□ -0.73
NPC1-208ENST00000590301 HMGB2P26583 209 aaKnown RBP10.49□□□□□ -0.73
NPC1-208ENST00000590301 NBPF6Q5VWK0 638 aa10.49□□□□□ -0.73
NPC1-208ENST00000590301 NBPF4Q96M43 638 aa10.49□□□□□ -0.73
NPC1-208ENST00000590301 PPP1R1BQ9UD71 204 aaPredicted RBP10.49□□□□□ -0.73
NPC1-208ENST00000590301 FAM208AQ9UK61 1670 aaKnown RBP10.49□□□□□ -0.73
NPC1-208ENST00000590301 NUP188Q5SRE5 1749 aa10.49□□□□□ -0.73
NPC1-208ENST00000590301 FKBP8Q14318 412 aa10.48□□□□□ -0.73
NPC1-208ENST00000590301 HSP90AB2PQ58FF8 381 aa10.48□□□□□ -0.73
NPC1-208ENST00000590301 HSPA5P11021 654 aaKnown RBP10.47□□□□□ -0.73
NPC1-208ENST00000590301 WASHC2AQ641Q2 1341 aa10.47□□□□□ -0.73
NPC1-208ENST00000590301 MEGF6O75095 1541 aa10.47□□□□□ -0.73
NPC1-208ENST00000590301 NHSQ6T4R5 1651 aa10.47□□□□□ -0.73
NPC1-208ENST00000590301 LTN1O94822 1766 aa10.47□□□□□ -0.73
NPC1-208ENST00000590301 PRIM1P49642 420 aaKnown RBP10.46□□□□□ -0.73
NPC1-208ENST00000590301 MTFR1LQ9H019 292 aa10.46□□□□□ -0.73
NPC1-208ENST00000590301 EMILIN1Q9Y6C2 1016 aa10.46□□□□□ -0.73
NPC1-208ENST00000590301 PCDH11XQ9BZA7 1347 aa10.46□□□□□ -0.73
NPC1-208ENST00000590301 PCDH11YQ9BZA8 1340 aa10.46□□□□□ -0.73
NPC1-208ENST00000590301 NSD2O96028 1365 aa10.46□□□□□ -0.74
NPC1-208ENST00000590301 PLEKHG2Q9H7P9 1386 aa10.46□□□□□ -0.74
NPC1-208ENST00000590301 USHBP1Q8N6Y0 703 aa10.45□□□□□ -0.74
NPC1-208ENST00000590301 SYTL4Q96C24 671 aaPredicted RBP10.45□□□□□ -0.74
NPC1-208ENST00000590301 POLR3GLQ9BT43 218 aa10.45□□□□□ -0.74
NPC1-208ENST00000590301 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.45□□□□□ -0.74
NPC1-208ENST00000590301 RGPD5Q99666 1765 aa10.44□□□□□ -0.74
NPC1-208ENST00000590301 NCAPD2Q15021 1401 aa10.44□□□□□ -0.74
NPC1-208ENST00000590301 PPM1GO15355 546 aaPredicted RBP10.44□□□□□ -0.74
NPC1-208ENST00000590301 SLC16A10Q8TF71 515 aa10.44□□□□□ -0.74
NPC1-208ENST00000590301 POLKQ9UBT6 870 aa10.44□□□□□ -0.74
NPC1-208ENST00000590301 SPG7Q9UQ90 795 aa10.44□□□□□ -0.74
NPC1-208ENST00000590301 ZBTB7AO95365 584 aa10.43□□□□□ -0.74
NPC1-208ENST00000590301 PTGER2P43116 358 aa10.43□□□□□ -0.74
NPC1-208ENST00000590301 AKT1S1Q96B36 256 aa10.43□□□□□ -0.74
NPC1-208ENST00000590301 PANK3Q9H999 370 aa10.43□□□□□ -0.74
NPC1-208ENST00000590301 LRRC4BQ9NT99 713 aa10.43□□□□□ -0.74
NPC1-208ENST00000590301 MYOM1P52179 1685 aa10.43□□□□□ -0.74
NPC1-208ENST00000590301 SBF2Q86WG5 1849 aa10.42□□□□□ -0.74
NPC1-208ENST00000590301 PDGFDQ9GZP0 370 aaPredicted RBP10.42□□□□□ -0.74
NPC1-208ENST00000590301 CYP27B1O15528 508 aa10.41□□□□□ -0.74
NPC1-208ENST00000590301 NKX1-1Q15270 411 aaPredicted RBP10.41□□□□□ -0.74
NPC1-208ENST00000590301 ZNF827Q17R98 1081 aa10.41□□□□□ -0.74
NPC1-208ENST00000590301 SMARCC1Q92922 1105 aaPredicted RBP10.41□□□□□ -0.74
NPC1-208ENST00000590301 CCNL1Q9UK58 526 aaPredicted RBP10.41□□□□□ -0.74
NPC1-208ENST00000590301 KNSTRNQ9Y448 316 aa10.41□□□□□ -0.74
NPC1-208ENST00000590301 PAPPAQ13219 1627 aa10.4□□□□□ -0.74
NPC1-208ENST00000590301 EYA1Q99502 592 aa10.4□□□□□ -0.74
NPC1-208ENST00000590301 SGIP1Q9BQI5 828 aa10.4□□□□□ -0.74
NPC1-208ENST00000590301 TFCP2L1Q9NZI6 479 aa10.4□□□□□ -0.74
NPC1-208ENST00000590301 ATF5Q9Y2D1 282 aaPredicted RBP10.4□□□□□ -0.74
NPC1-208ENST00000590301 MAP3K5Q99683 1374 aa10.39□□□□□ -0.75
NPC1-208ENST00000590301 CASZ1Q86V15 1759 aa10.39□□□□□ -0.75
NPC1-208ENST00000590301 TNNT2P45379 298 aaPredicted RBP10.39□□□□□ -0.75
NPC1-208ENST00000590301 EIF4A2Q14240 407 aaKnown RBP10.39□□□□□ -0.75
NPC1-208ENST00000590301 MORC1Q86VD1 984 aa10.39□□□□□ -0.75
NPC1-208ENST00000590301 ARXQ96QS3 562 aa10.39□□□□□ -0.75
NPC1-208ENST00000590301 KIF20BQ96Q89 1820 aa10.39□□□□□ -0.75
NPC1-208ENST00000590301 PNPLA7Q6ZV29 1317 aa10.38□□□□□ -0.75
NPC1-208ENST00000590301 IGSF1Q8N6C5 1336 aa10.38□□□□□ -0.75
NPC1-208ENST00000590301 POLD1P28340 1107 aa10.38□□□□□ -0.75
NPC1-208ENST00000590301 MPRIPQ6WCQ1 1025 aa10.38□□□□□ -0.75
NPC1-208ENST00000590301 IFNL2Q8IZJ0 200 aa10.38□□□□□ -0.75
NPC1-208ENST00000590301 FLAD1Q8NFF5 587 aa10.38□□□□□ -0.75
NPC1-208ENST00000590301 PALLDQ8WX93 1383 aa10.38□□□□□ -0.75
NPC1-208ENST00000590301 HSP90AB1P08238 724 aaKnown RBP10.37□□□□□ -0.75
NPC1-208ENST00000590301 FHDC1Q9C0D6 1143 aaPredicted RBP10.37□□□□□ -0.75
NPC1-208ENST00000590301 BTAF1O14981 1849 aa10.37□□□□□ -0.75
NPC1-208ENST00000590301 KIF7Q2M1P5 1343 aa10.36□□□□□ -0.75
NPC1-208ENST00000590301 ANKRD26Q9UPS8 1709 aa10.36□□□□□ -0.75
NPC1-208ENST00000590301 PHKG2P15735 406 aa10.36□□□□□ -0.75
NPC1-208ENST00000590301 AMOTQ4VCS5 1084 aa10.36□□□□□ -0.75
NPC1-208ENST00000590301 PIGBQ92521 554 aa10.36□□□□□ -0.75
NPC1-208ENST00000590301 SYT17Q9BSW7 474 aa10.36□□□□□ -0.75
NPC1-208ENST00000590301 TMOD3Q9NYL9 352 aa10.36□□□□□ -0.75
NPC1-208ENST00000590301 ATXN8OSP0DMR3 200 aa10.35□□□□□ -0.75
NPC1-208ENST00000590301 KCNQ4P56696 695 aa10.35□□□□□ -0.75
NPC1-208ENST00000590301 PLEKHO1Q53GL0 409 aaPredicted RBP10.35□□□□□ -0.75
NPC1-208ENST00000590301 DCAF5Q96JK2 942 aa10.35□□□□□ -0.75
NPC1-208ENST00000590301 DOT1LQ8TEK3 1739 aa10.34□□□□□ -0.75
NPC1-208ENST00000590301 ERVV-2B6SEH9 535 aa10.34□□□□□ -0.75
NPC1-208ENST00000590301 YY1P25490 414 aa10.34□□□□□ -0.75
NPC1-208ENST00000590301 LOC102724428A0A0B4J2F2 783 aa10.33□□□□□ -0.76
NPC1-208ENST00000590301 SIK1P57059 783 aa10.33□□□□□ -0.76
NPC1-208ENST00000590301 AK7Q96M32 723 aa10.33□□□□□ -0.76
NPC1-208ENST00000590301 PKD1L3Q7Z443 1732 aa10.33□□□□□ -0.76
NPC1-208ENST00000590301 SHANK3Q9BYB0 1731 aa10.33□□□□□ -0.76
NPC1-208ENST00000590301 KDRP35968 1356 aa10.32□□□□□ -0.76
NPC1-208ENST00000590301 NPC1L1Q9UHC9 1359 aa10.32□□□□□ -0.76
NPC1-208ENST00000590301 COL23A1Q86Y22 540 aaPredicted RBP10.32□□□□□ -0.76
NPC1-208ENST00000590301 PER1O15534 1290 aaPredicted RBP10.31□□□□□ -0.76
NPC1-208ENST00000590301 SSFA2P28290 1259 aa10.31□□□□□ -0.76
NPC1-208ENST00000590301 IL13P35225 146 aa10.31□□□□□ -0.76
NPC1-208ENST00000590301 C1orf141Q5JVX7 400 aa10.31□□□□□ -0.76
NPC1-208ENST00000590301 ZNF530Q6P9A1 599 aaPredicted RBP10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms