RNA–Protein interactions for RNA: ENST00000590215.1

MBD1-223, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 5

Gene MBD1, Length 749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-223ENST00000590215 ZCRB1Q8TBF4 217 aaKnown RBP25.26■■□□□ 1.63
MBD1-223ENST00000590215 KDRP35968 1356 aa25.26■■□□□ 1.63
MBD1-223ENST00000590215 CFAP53Q96M91 514 aa25.25■■□□□ 1.63
MBD1-223ENST00000590215 PRKRIP1Q9H875 184 aaPredicted RBP25.23■■□□□ 1.63
MBD1-223ENST00000590215 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.23■■□□□ 1.631e-7■□□□□ 11
MBD1-223ENST00000590215 SULT6B1Q6IMI4 303 aa25.21■■□□□ 1.63
MBD1-223ENST00000590215 AEBP1Q8IUX7 1158 aa25.21■■□□□ 1.63
MBD1-223ENST00000590215 SHANK3Q9BYB0 1731 aa25.2■■□□□ 1.63
MBD1-223ENST00000590215 MYBBP1AQ9BQG0 1328 aaKnown RBP25.19■■□□□ 1.62
MBD1-223ENST00000590215 PKD1L3Q7Z443 1732 aa25.19■■□□□ 1.62
MBD1-223ENST00000590215 DDX54Q8TDD1 881 aaKnown RBP25.18■■□□□ 1.62
MBD1-223ENST00000590215 PCDH11XQ9BZA7 1347 aa25.17■■□□□ 1.62
MBD1-223ENST00000590215 PCDH11YQ9BZA8 1340 aa25.17■■□□□ 1.62
MBD1-223ENST00000590215 SPG7Q9UQ90 795 aa25.17■■□□□ 1.62
MBD1-223ENST00000590215 CYP27B1O15528 508 aa25.16■■□□□ 1.62
MBD1-223ENST00000590215 NUDCQ9Y266 331 aa25.16■■□□□ 1.62
MBD1-223ENST00000590215 TRIM37O94972 964 aa25.15■■□□□ 1.62
MBD1-223ENST00000590215 SBF2Q86WG5 1849 aa25.14■■□□□ 1.62
MBD1-223ENST00000590215 U2SURPO15042 1029 aaKnown RBP25.13■■□□□ 1.61
MBD1-223ENST00000590215 HMOX1P09601 288 aa25.13■■□□□ 1.61
MBD1-223ENST00000590215 AMOTQ4VCS5 1084 aa25.13■■□□□ 1.61
MBD1-223ENST00000590215 PLEKHO1Q53GL0 409 aaPredicted RBP25.13■■□□□ 1.61
MBD1-223ENST00000590215 SF3B2Q13435 895 aaKnown RBP25.12■■□□□ 1.61
MBD1-223ENST00000590215 NKX1-1Q15270 411 aaPredicted RBP25.12■■□□□ 1.61
MBD1-223ENST00000590215 BCL11BQ9C0K0 894 aaPredicted RBP25.12■■□□□ 1.61
MBD1-223ENST00000590215 TNS1Q9HBL0 1735 aaKnown RBP25.11■■□□□ 1.61
MBD1-223ENST00000590215 PHKG2P15735 406 aa25.09■■□□□ 1.61
MBD1-223ENST00000590215 IFNL2Q8IZJ0 200 aa25.09■■□□□ 1.61
MBD1-223ENST00000590215 PTF1AQ7RTS3 328 aa25.08■■□□□ 1.61
MBD1-223ENST00000590215 RSPH6AQ9H0K4 717 aa25.08■■□□□ 1.61
MBD1-223ENST00000590215 KCNQ2O43526 872 aa25.07■■□□□ 1.6
MBD1-223ENST00000590215 FCHSD2O94868 740 aa25.07■■□□□ 1.6
MBD1-223ENST00000590215 U2AF1L5P0DN76 240 aaPredicted RBP25.07■■□□□ 1.6
MBD1-223ENST00000590215 U2AF1Q01081 240 aaKnown RBP eCLIP25.07■■□□□ 1.6
MBD1-223ENST00000590215 NHSQ6T4R5 1651 aa25.07■■□□□ 1.6
MBD1-223ENST00000590215 BAG6P46379 1132 aa25.06■■□□□ 1.6
MBD1-223ENST00000590215 DEFB132Q7Z7B7 95 aa25.06■■□□□ 1.6
MBD1-223ENST00000590215 ACSBG1Q96GR2 724 aa25.06■■□□□ 1.6
MBD1-223ENST00000590215 APBA3O96018 575 aa25.05■■□□□ 1.6
MBD1-223ENST00000590215 ZNF530Q6P9A1 599 aaPredicted RBP25.05■■□□□ 1.6
MBD1-223ENST00000590215 ANP32CO43423 234 aa25.04■■□□□ 1.6
MBD1-223ENST00000590215 PLSCR1O15162 318 aa25.03■■□□□ 1.6
MBD1-223ENST00000590215 PRIM1P49642 420 aaKnown RBP25.03■■□□□ 1.6
MBD1-223ENST00000590215 CAMKK2Q96RR4 588 aa25.03■■□□□ 1.6
MBD1-223ENST00000590215 KAT6BQ8WYB5 2073 aa25.02■■□□□ 1.6
MBD1-223ENST00000590215 HSP90AB1P08238 724 aaKnown RBP25.02■■□□□ 1.6
MBD1-223ENST00000590215 PRKAR2BP31323 418 aa25.02■■□□□ 1.6
MBD1-223ENST00000590215 DOT1LQ8TEK3 1739 aa25.01■■□□□ 1.59
MBD1-223ENST00000590215 EN1Q05925 392 aaPredicted RBP25.01■■□□□ 1.59
MBD1-223ENST00000590215 MTHFSDQ2M296 383 aaKnown RBP25.01■■□□□ 1.59
MBD1-223ENST00000590215 AKAP4Q5JQC9 854 aa25■■□□□ 1.59
MBD1-223ENST00000590215 DCAF5Q96JK2 942 aa25■■□□□ 1.59
MBD1-223ENST00000590215 C1orf141Q5JVX7 400 aa24.99■■□□□ 1.59
MBD1-223ENST00000590215 PHACTR3Q96KR7 559 aa24.99■■□□□ 1.59
MBD1-223ENST00000590215 TOGARAM1Q9Y4F4 1720 aa24.98■■□□□ 1.59
MBD1-223ENST00000590215 KDM6AO15550 1401 aaPredicted RBP24.97■■□□□ 1.59
MBD1-223ENST00000590215 GAS2L2Q8NHY3 880 aa24.97■■□□□ 1.59
MBD1-223ENST00000590215 RGPD3A6NKT7 1758 aaPredicted RBP24.97■■□□□ 1.59
MBD1-223ENST00000590215 RGPD4Q7Z3J3 1758 aa24.97■■□□□ 1.59
MBD1-223ENST00000590215 BTAF1O14981 1849 aa24.96■■□□□ 1.59
MBD1-223ENST00000590215 ERVV-2B6SEH9 535 aa24.96■■□□□ 1.59
MBD1-223ENST00000590215 EZH2Q15910 746 aaKnown RBP24.96■■□□□ 1.59
MBD1-223ENST00000590215 SYTL4Q96C24 671 aaPredicted RBP24.96■■□□□ 1.59
MBD1-223ENST00000590215 PLEKHF1Q96S99 279 aa24.96■■□□□ 1.59
MBD1-223ENST00000590215 PNNQ9H307 717 aaKnown RBP24.94■■□□□ 1.58
MBD1-223ENST00000590215 MPRIPQ6WCQ1 1025 aa24.93■■□□□ 1.58
MBD1-223ENST00000590215 PROM2Q8N271 834 aa24.93■■□□□ 1.58
MBD1-223ENST00000590215 ITGB4P16144 1822 aa24.92■■□□□ 1.58
MBD1-223ENST00000590215 CCDC184Q52MB2 194 aa24.92■■□□□ 1.58
MBD1-223ENST00000590215 PIGBQ92521 554 aa24.92■■□□□ 1.58
MBD1-223ENST00000590215 ADAMTS7Q9UKP4 1686 aa24.91■■□□□ 1.58
MBD1-223ENST00000590215 RNMTO43148 476 aaKnown RBP24.9■■□□□ 1.58
MBD1-223ENST00000590215 WDR43Q15061 677 aaKnown RBP eCLIP24.9■■□□□ 1.58
MBD1-223ENST00000590215 TMOD3Q9NYL9 352 aa24.9■■□□□ 1.58
MBD1-223ENST00000590215 RREB1Q92766 1687 aa24.9■■□□□ 1.58
MBD1-223ENST00000590215 MAP3K5Q99683 1374 aa24.9■■□□□ 1.58
MBD1-223ENST00000590215 GNAT3A8MTJ3 354 aa24.89■■□□□ 1.58
MBD1-223ENST00000590215 TXNRD1Q16881 649 aa24.89■■□□□ 1.58
MBD1-223ENST00000590215 LGR6Q9HBX8 967 aa24.89■■□□□ 1.58
MBD1-223ENST00000590215 ADAMTS8Q9UP79 889 aa24.89■■□□□ 1.58
MBD1-223ENST00000590215 SCN11AQ9UI33 1791 aa24.88■■□□□ 1.57
MBD1-223ENST00000590215 NEFMP07197 916 aa24.87■■□□□ 1.57
MBD1-223ENST00000590215 CABP4P57796 275 aa24.87■■□□□ 1.57
MBD1-223ENST00000590215 MRC1P22897 1456 aa24.87■■□□□ 1.57
MBD1-223ENST00000590215 IL17REQ8NFR9 667 aa24.86■■□□□ 1.57
MBD1-223ENST00000590215 SMARCC1Q92922 1105 aaPredicted RBP24.86■■□□□ 1.57
MBD1-223ENST00000590215 HTATSF1O43719 755 aaKnown RBP24.85■■□□□ 1.57
MBD1-223ENST00000590215 SLC52A2Q9HAB3 445 aa24.85■■□□□ 1.57
MBD1-223ENST00000590215 CEMIPQ8WUJ3 1361 aa24.84■■□□□ 1.57
MBD1-223ENST00000590215 SLC27A3Q5K4L6 730 aa24.84■■□□□ 1.57
MBD1-223ENST00000590215 NFATC2IPQ8NCF5 419 aa24.84■■□□□ 1.57
MBD1-223ENST00000590215 PNISRQ8TF01 805 aaKnown RBP24.84■■□□□ 1.57
MBD1-223ENST00000590215 MRS2Q9HD23 443 aa24.84■■□□□ 1.57
MBD1-223ENST00000590215 MAPK8IP3Q9UPT6 1336 aa24.84■■□□□ 1.57
MBD1-223ENST00000590215 LY75O60449 1722 aa24.83■■□□□ 1.57
MBD1-223ENST00000590215 NUP188Q5SRE5 1749 aa24.83■■□□□ 1.57
MBD1-223ENST00000590215 PALLDQ8WX93 1383 aa24.83■■□□□ 1.57
MBD1-223ENST00000590215 NFE2L2Q16236 605 aa24.83■■□□□ 1.57
MBD1-223ENST00000590215 ATG3Q9NT62 314 aa24.83■■□□□ 1.57
MBD1-223ENST00000590215 ASAP1Q9ULH1 1129 aa24.83■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms