RNA–Protein interactions for RNA: ENST00000590034.2

SF3A2-205, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 3

Gene SF3A2, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-205ENST00000590034 PNPLA7Q6ZV29 1317 aa19.6■□□□□ 0.73
SF3A2-205ENST00000590034 AMPHP49418 695 aa19.6■□□□□ 0.73
SF3A2-205ENST00000590034 SLC27A3Q5K4L6 730 aa19.6■□□□□ 0.73
SF3A2-205ENST00000590034 RTL1A6NKG5 1358 aa19.59■□□□□ 0.73
SF3A2-205ENST00000590034 PRIM1P49642 420 aaKnown RBP19.59■□□□□ 0.73
SF3A2-205ENST00000590034 RRS1Q15050 365 aaKnown RBP19.59■□□□□ 0.73
SF3A2-205ENST00000590034 ZNF784Q8NCA9 323 aaPredicted RBP19.59■□□□□ 0.73
SF3A2-205ENST00000590034 SYTL4Q96C24 671 aaPredicted RBP19.59■□□□□ 0.73
SF3A2-205ENST00000590034 KIF20BQ96Q89 1820 aa19.58■□□□□ 0.73
SF3A2-205ENST00000590034 GOLGB1Q14789 3259 aaKnown RBP19.57■□□□□ 0.72
SF3A2-205ENST00000590034 FYB1O15117 783 aa19.57■□□□□ 0.72
SF3A2-205ENST00000590034 NBPF6Q5VWK0 638 aa19.57■□□□□ 0.72
SF3A2-205ENST00000590034 ZCRB1Q8TBF4 217 aaKnown RBP19.57■□□□□ 0.72
SF3A2-205ENST00000590034 NBPF4Q96M43 638 aa19.57■□□□□ 0.72
SF3A2-205ENST00000590034 GGNBP2Q9H3C7 697 aa19.57■□□□□ 0.72
SF3A2-205ENST00000590034 USHBP1Q8N6Y0 703 aa19.56■□□□□ 0.72
SF3A2-205ENST00000590034 USP47Q96K76 1375 aa19.55■□□□□ 0.72
SF3A2-205ENST00000590034 SLC16A10Q8TF71 515 aa19.54■□□□□ 0.72
SF3A2-205ENST00000590034 SLC24A1O60721 1099 aa19.53■□□□□ 0.72
SF3A2-205ENST00000590034 TFCP2L1Q9NZI6 479 aa19.53■□□□□ 0.72
SF3A2-205ENST00000590034 C5P01031 1676 aa19.52■□□□□ 0.71
SF3A2-205ENST00000590034 TOGARAM1Q9Y4F4 1720 aa19.51■□□□□ 0.71
SF3A2-205ENST00000590034 TMF1P82094 1093 aa19.51■□□□□ 0.71
SF3A2-205ENST00000590034 CCNL1Q9UK58 526 aaPredicted RBP19.51■□□□□ 0.71
SF3A2-205ENST00000590034 TAF1LQ8IZX4 1826 aa19.51■□□□□ 0.71
SF3A2-205ENST00000590034 SMG6Q86US8 1419 aaKnown RBP19.51■□□□□ 0.71
SF3A2-205ENST00000590034 INSRP06213 1382 aa19.5■□□□□ 0.71
SF3A2-205ENST00000590034 HSP90AB2PQ58FF8 381 aa19.5■□□□□ 0.71
SF3A2-205ENST00000590034 KLHL34Q8N239 644 aa19.5■□□□□ 0.71
SF3A2-205ENST00000590034 CGNL1Q0VF96 1302 aa19.5■□□□□ 0.71
SF3A2-205ENST00000590034 POLD1P28340 1107 aa19.49■□□□□ 0.71
SF3A2-205ENST00000590034 NLGN2Q8NFZ4 835 aa19.49■□□□□ 0.71
SF3A2-205ENST00000590034 ITGB4P16144 1822 aa19.48■□□□□ 0.71
SF3A2-205ENST00000590034 PKD1L3Q7Z443 1732 aa19.48■□□□□ 0.71
SF3A2-205ENST00000590034 FLT4P35916 1363 aa19.48■□□□□ 0.71
SF3A2-205ENST00000590034 RAPGEF4Q8WZA2 1011 aa19.48■□□□□ 0.71
SF3A2-205ENST00000590034 ANKRD26Q9UPS8 1709 aa19.48■□□□□ 0.71
SF3A2-205ENST00000590034 GPR162Q16538 588 aa19.47■□□□□ 0.71
SF3A2-205ENST00000590034 TATP17735 454 aaPredicted RBP19.46■□□□□ 0.71
SF3A2-205ENST00000590034 COL23A1Q86Y22 540 aaPredicted RBP19.46■□□□□ 0.71
SF3A2-205ENST00000590034 CARD14Q9BXL6 1004 aa19.46■□□□□ 0.71
SF3A2-205ENST00000590034 KIF24Q5T7B8 1368 aa19.45■□□□□ 0.7
SF3A2-205ENST00000590034 NSD3Q9BZ95 1437 aa19.45■□□□□ 0.7
SF3A2-205ENST00000590034 PCDH11XQ9BZA7 1347 aa19.45■□□□□ 0.7
SF3A2-205ENST00000590034 PCDH11YQ9BZA8 1340 aa19.45■□□□□ 0.7
SF3A2-205ENST00000590034 CYP27B1O15528 508 aa19.44■□□□□ 0.7
SF3A2-205ENST00000590034 EMILIN1Q9Y6C2 1016 aa19.44■□□□□ 0.7
SF3A2-205ENST00000590034 NCAPD2Q15021 1401 aa19.43■□□□□ 0.7
SF3A2-205ENST00000590034 PALLDQ8WX93 1383 aa19.43■□□□□ 0.7
SF3A2-205ENST00000590034 C4BP0C0L5 1744 aa19.42■□□□□ 0.7
SF3A2-205ENST00000590034 MSL1Q68DK7 614 aa19.42■□□□□ 0.7
SF3A2-205ENST00000590034 PELP1Q8IZL8 1130 aaKnown RBP19.42■□□□□ 0.7
SF3A2-205ENST00000590034 MSH5O43196 834 aa19.41■□□□□ 0.7
SF3A2-205ENST00000590034 YBX3P16989 372 aaKnown RBP eCLIP19.41■□□□□ 0.71e-9■■□□□ 13.3
SF3A2-205ENST00000590034 MAP2P11137 1827 aaKnown RBP19.41■□□□□ 0.7
SF3A2-205ENST00000590034 UBR3Q6ZT12 1888 aa19.41■□□□□ 0.7
SF3A2-205ENST00000590034 CDCA8Q53HL2 280 aa19.4■□□□□ 0.7
SF3A2-205ENST00000590034 MPRIPQ6WCQ1 1025 aa19.4■□□□□ 0.7
SF3A2-205ENST00000590034 AMIGO3Q86WK7 504 aa19.39■□□□□ 0.69
SF3A2-205ENST00000590034 C1QTNF8P60827 252 aa19.38■□□□□ 0.69
SF3A2-205ENST00000590034 PIGBQ92521 554 aa19.36■□□□□ 0.69
SF3A2-205ENST00000590034 PPM1GO15355 546 aaPredicted RBP19.35■□□□□ 0.69
SF3A2-205ENST00000590034 TRIM26Q12899 539 aaPredicted RBP19.35■□□□□ 0.69
SF3A2-205ENST00000590034 SMIM5Q71RC9 77 aa19.35■□□□□ 0.69
SF3A2-205ENST00000590034 WASHC2AQ641Q2 1341 aa19.34■□□□□ 0.69
SF3A2-205ENST00000590034 SENP3-EIF4A1A0A087X0R7 540 aa19.34■□□□□ 0.69
SF3A2-205ENST00000590034 NKX1-1Q15270 411 aaPredicted RBP19.34■□□□□ 0.69
SF3A2-205ENST00000590034 SMARCC1Q92922 1105 aaPredicted RBP19.33■□□□□ 0.68
SF3A2-205ENST00000590034 EYA1Q99502 592 aa19.33■□□□□ 0.68
SF3A2-205ENST00000590034 FLAD1Q8NFF5 587 aa19.32■□□□□ 0.68
SF3A2-205ENST00000590034 AK7Q96M32 723 aa19.31■□□□□ 0.68
SF3A2-205ENST00000590034 POLKQ9UBT6 870 aa19.31■□□□□ 0.68
SF3A2-205ENST00000590034 CD2APQ9Y5K6 639 aa19.31■□□□□ 0.68
SF3A2-205ENST00000590034 GRIN3BO60391 1043 aa19.3■□□□□ 0.68
SF3A2-205ENST00000590034 GIGYF1O75420 1035 aaPredicted RBP19.3■□□□□ 0.68
SF3A2-205ENST00000590034 PHF14O94880 888 aa19.3■□□□□ 0.68
SF3A2-205ENST00000590034 LINC00116Q8NCU8 138 aa19.3■□□□□ 0.68
SF3A2-205ENST00000590034 SPG7Q9UQ90 795 aa19.3■□□□□ 0.68
SF3A2-205ENST00000590034 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.29■□□□□ 0.68
SF3A2-205ENST00000590034 LOC102724428A0A0B4J2F2 783 aa19.29■□□□□ 0.68
SF3A2-205ENST00000590034 SIK1P57059 783 aa19.29■□□□□ 0.68
SF3A2-205ENST00000590034 ITPK1Q13572 414 aa19.28■□□□□ 0.68
SF3A2-205ENST00000590034 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.28■□□□□ 0.68
SF3A2-205ENST00000590034 ASAP1Q9ULH1 1129 aa19.28■□□□□ 0.68
SF3A2-205ENST00000590034 PHKG2P15735 406 aa19.27■□□□□ 0.68
SF3A2-205ENST00000590034 HMGB2P26583 209 aaKnown RBP19.27■□□□□ 0.68
SF3A2-205ENST00000590034 EIF4A2Q14240 407 aaKnown RBP19.27■□□□□ 0.68
SF3A2-205ENST00000590034 TMOD3Q9NYL9 352 aa19.27■□□□□ 0.68
SF3A2-205ENST00000590034 ATP10DQ9P241 1426 aa19.26■□□□□ 0.67
SF3A2-205ENST00000590034 CEP350Q5VT06 3117 aa19.25■□□□□ 0.67
SF3A2-205ENST00000590034 ADCY9O60503 1353 aa19.25■□□□□ 0.67
SF3A2-205ENST00000590034 SSFA2P28290 1259 aa19.25■□□□□ 0.67
SF3A2-205ENST00000590034 TNNT2P45379 298 aaPredicted RBP19.25■□□□□ 0.67
SF3A2-205ENST00000590034 IFNL2Q8IZJ0 200 aa19.25■□□□□ 0.67
SF3A2-205ENST00000590034 TIMELESSQ9UNS1 1208 aa19.25■□□□□ 0.67
SF3A2-205ENST00000590034 KDRP35968 1356 aa19.24■□□□□ 0.67
SF3A2-205ENST00000590034 POLR3GLQ9BT43 218 aa19.24■□□□□ 0.67
SF3A2-205ENST00000590034 ATG3Q9NT62 314 aa19.24■□□□□ 0.67
SF3A2-205ENST00000590034 WWC3Q9ULE0 1092 aa19.24■□□□□ 0.67
SF3A2-205ENST00000590034 IGSF1Q8N6C5 1336 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms